Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0242:0243
Extra
PDB:
ATOM 1 O3' U A 241 79.546 143.185 -0.102 1.00 78.48 O
ATOM 2 P C A 242 78.008 143.023 -0.551 1.00 80.98 P
ATOM 3 OP1 C A 242 77.401 144.377 -0.640 1.00 80.63 O
ATOM 4 OP2 C A 242 77.387 141.999 0.331 1.00 80.63 O
ATOM 5 O5' C A 242 78.108 142.417 -2.021 1.00 81.12 O
ATOM 6 C5' C A 242 76.944 141.904 -2.698 1.00 82.11 C
ATOM 7 C4' C A 242 76.936 142.362 -4.138 1.00 83.65 C
ATOM 8 O4' C A 242 76.788 143.806 -4.184 1.00 84.55 O
ATOM 9 C3' C A 242 78.215 142.097 -4.913 1.00 83.93 C
ATOM 10 O3' C A 242 78.262 140.770 -5.423 1.00 84.45 O
ATOM 11 C2' C A 242 78.152 143.142 -6.019 1.00 83.98 C
ATOM 12 O2' C A 242 77.311 142.770 -7.093 1.00 83.32 O
ATOM 13 C1' C A 242 77.536 144.331 -5.274 1.00 84.94 C
ATOM 14 N1 C A 242 78.528 145.300 -4.753 1.00 85.97 N
ATOM 15 C2 C A 242 79.375 145.967 -5.664 1.00 86.81 C
ATOM 16 O2 C A 242 79.267 145.727 -6.881 1.00 86.92 O
ATOM 17 N3 C A 242 80.287 146.853 -5.191 1.00 86.68 N
ATOM 18 C4 C A 242 80.374 147.088 -3.877 1.00 86.61 C
ATOM 19 N4 C A 242 81.288 147.969 -3.456 1.00 85.40 N
ATOM 20 C5 C A 242 79.527 146.430 -2.935 1.00 86.43 C
ATOM 21 C6 C A 242 78.630 145.553 -3.411 1.00 86.08 C
ATOM 22 P A A 243 79.674 140.012 -5.525 1.00 85.43 P
ATOM 23 OP1 A A 243 79.435 138.705 -6.201 1.00 84.71 O
ATOM 24 OP2 A A 243 80.292 140.038 -4.173 1.00 85.54 O
ATOM 25 O5' A A 243 80.551 140.938 -6.487 1.00 85.87 O
TER
ATOM 1 O3' C B 242 78.262 140.770 -5.423 1.00 84.45 O
ATOM 2 P A B 243 79.674 140.012 -5.525 1.00 85.43 P
ATOM 3 OP1 A B 243 79.435 138.705 -6.201 1.00 84.71 O
ATOM 4 OP2 A B 243 80.292 140.038 -4.173 1.00 85.54 O
ATOM 5 O5' A B 243 80.551 140.938 -6.487 1.00 85.87 O
ATOM 6 C5' A B 243 80.194 141.131 -7.879 1.00 85.53 C
ATOM 7 C4' A B 243 81.063 142.204 -8.505 1.00 85.12 C
ATOM 8 O4' A B 243 80.868 143.455 -7.793 1.00 85.21 O
ATOM 9 C3' A B 243 82.565 141.972 -8.442 1.00 85.31 C
ATOM 10 O3' A B 243 83.018 141.142 -9.507 1.00 85.31 O
ATOM 11 C2' A B 243 83.118 143.385 -8.557 1.00 85.62 C
ATOM 12 O2' A B 243 83.124 143.857 -9.889 1.00 86.27 O
ATOM 13 C1' A B 243 82.089 144.176 -7.748 1.00 85.55 C
ATOM 14 N9 A B 243 82.468 144.364 -6.345 1.00 86.18 N
ATOM 15 C8 A B 243 82.090 143.619 -5.254 1.00 86.43 C
ATOM 16 N7 A B 243 82.594 144.047 -4.122 1.00 86.24 N
ATOM 17 C5 A B 243 83.356 145.145 -4.489 1.00 85.83 C
ATOM 18 C6 A B 243 84.148 146.036 -3.746 1.00 85.97 C
ATOM 19 N6 A B 243 84.312 145.958 -2.425 1.00 85.43 N
ATOM 20 N1 A B 243 84.778 147.023 -4.417 1.00 86.09 N
ATOM 21 C2 A B 243 84.622 147.096 -5.743 1.00 86.17 C
ATOM 22 N3 A B 243 83.910 146.317 -6.553 1.00 86.40 N
ATOM 23 C4 A B 243 83.292 145.350 -5.855 1.00 86.25 C
ATOM 24 P C B 244 84.396 140.326 -9.354 1.00 85.99 P
ATOM 25 OP1 C B 244 84.658 139.640 -10.649 1.00 85.38 O
ATOM 26 OP2 C B 244 84.325 139.525 -8.101 1.00 86.18 O
ATOM 27 O5' C B 244 85.501 141.458 -9.144 1.00 84.98 O
TER
ATOM 2 P C A 242 78.008 143.023 -0.551 1.00 80.98 P
ATOM 3 OP1 C A 242 77.401 144.377 -0.640 1.00 80.63 O
ATOM 4 OP2 C A 242 77.387 141.999 0.331 1.00 80.63 O
ATOM 5 O5' C A 242 78.108 142.417 -2.021 1.00 81.12 O
ATOM 6 C5' C A 242 76.944 141.904 -2.698 1.00 82.11 C
ATOM 7 C4' C A 242 76.936 142.362 -4.138 1.00 83.65 C
ATOM 8 O4' C A 242 76.788 143.806 -4.184 1.00 84.55 O
ATOM 9 C3' C A 242 78.215 142.097 -4.913 1.00 83.93 C
ATOM 10 O3' C A 242 78.262 140.770 -5.423 1.00 84.45 O
ATOM 11 C2' C A 242 78.152 143.142 -6.019 1.00 83.98 C
ATOM 12 O2' C A 242 77.311 142.770 -7.093 1.00 83.32 O
ATOM 13 C1' C A 242 77.536 144.331 -5.274 1.00 84.94 C
ATOM 14 N1 C A 242 78.528 145.300 -4.753 1.00 85.97 N
ATOM 15 C2 C A 242 79.375 145.967 -5.664 1.00 86.81 C
ATOM 16 O2 C A 242 79.267 145.727 -6.881 1.00 86.92 O
ATOM 17 N3 C A 242 80.287 146.853 -5.191 1.00 86.68 N
ATOM 18 C4 C A 242 80.374 147.088 -3.877 1.00 86.61 C
ATOM 19 N4 C A 242 81.288 147.969 -3.456 1.00 85.40 N
ATOM 20 C5 C A 242 79.527 146.430 -2.935 1.00 86.43 C
ATOM 21 C6 C A 242 78.630 145.553 -3.411 1.00 86.08 C
ATOM 22 P A A 243 79.674 140.012 -5.525 1.00 85.43 P
ATOM 23 OP1 A A 243 79.435 138.705 -6.201 1.00 84.71 O
ATOM 24 OP2 A A 243 80.292 140.038 -4.173 1.00 85.54 O
ATOM 25 O5' A A 243 80.551 140.938 -6.487 1.00 85.87 O
TER
ATOM 1 O3' C B 242 78.262 140.770 -5.423 1.00 84.45 O
ATOM 2 P A B 243 79.674 140.012 -5.525 1.00 85.43 P
ATOM 3 OP1 A B 243 79.435 138.705 -6.201 1.00 84.71 O
ATOM 4 OP2 A B 243 80.292 140.038 -4.173 1.00 85.54 O
ATOM 5 O5' A B 243 80.551 140.938 -6.487 1.00 85.87 O
ATOM 6 C5' A B 243 80.194 141.131 -7.879 1.00 85.53 C
ATOM 7 C4' A B 243 81.063 142.204 -8.505 1.00 85.12 C
ATOM 8 O4' A B 243 80.868 143.455 -7.793 1.00 85.21 O
ATOM 9 C3' A B 243 82.565 141.972 -8.442 1.00 85.31 C
ATOM 10 O3' A B 243 83.018 141.142 -9.507 1.00 85.31 O
ATOM 11 C2' A B 243 83.118 143.385 -8.557 1.00 85.62 C
ATOM 12 O2' A B 243 83.124 143.857 -9.889 1.00 86.27 O
ATOM 13 C1' A B 243 82.089 144.176 -7.748 1.00 85.55 C
ATOM 14 N9 A B 243 82.468 144.364 -6.345 1.00 86.18 N
ATOM 15 C8 A B 243 82.090 143.619 -5.254 1.00 86.43 C
ATOM 16 N7 A B 243 82.594 144.047 -4.122 1.00 86.24 N
ATOM 17 C5 A B 243 83.356 145.145 -4.489 1.00 85.83 C
ATOM 18 C6 A B 243 84.148 146.036 -3.746 1.00 85.97 C
ATOM 19 N6 A B 243 84.312 145.958 -2.425 1.00 85.43 N
ATOM 20 N1 A B 243 84.778 147.023 -4.417 1.00 86.09 N
ATOM 21 C2 A B 243 84.622 147.096 -5.743 1.00 86.17 C
ATOM 22 N3 A B 243 83.910 146.317 -6.553 1.00 86.40 N
ATOM 23 C4 A B 243 83.292 145.350 -5.855 1.00 86.25 C
ATOM 24 P C B 244 84.396 140.326 -9.354 1.00 85.99 P
ATOM 25 OP1 C B 244 84.658 139.640 -10.649 1.00 85.38 O
ATOM 26 OP2 C B 244 84.325 139.525 -8.101 1.00 86.18 O
ATOM 27 O5' C B 244 85.501 141.458 -9.144 1.00 84.98 O
TER
Atoms:
C2: (79.375,145.967,-5.664)
OP1: (77.401,144.377,-0.640)
OP2: (77.387,141.999,0.331)
C4: (80.374,147.088,-3.877)
O5': (78.108,142.417,-2.021)
C3': (78.215,142.097,-4.913)
C1': (77.536,144.331,-5.274)
O4': (76.788,143.806,-4.184)
C5': (76.944,141.904,-2.698)
P: (78.008,143.023,-0.551)
O2: (79.267,145.727,-6.881)
C4': (76.936,142.362,-4.138)
C2': (78.152,143.142,-6.019)
O2': (77.311,142.770,-7.093)
N1: (78.528,145.300,-4.753)
N3: (80.287,146.853,-5.191)
N4: (81.288,147.969,-3.456)
C6: (78.630,145.553,-3.411)
C5: (79.527,146.430,-2.935)
O3': (78.262,140.770,-5.423)
OP1: (77.401,144.377,-0.640)
OP2: (77.387,141.999,0.331)
C4: (80.374,147.088,-3.877)
O5': (78.108,142.417,-2.021)
C3': (78.215,142.097,-4.913)
C1': (77.536,144.331,-5.274)
O4': (76.788,143.806,-4.184)
C5': (76.944,141.904,-2.698)
P: (78.008,143.023,-0.551)
O2: (79.267,145.727,-6.881)
C4': (76.936,142.362,-4.138)
C2': (78.152,143.142,-6.019)
O2': (77.311,142.770,-7.093)
N1: (78.528,145.300,-4.753)
N3: (80.287,146.853,-5.191)
N4: (81.288,147.969,-3.456)
C6: (78.630,145.553,-3.411)
C5: (79.527,146.430,-2.935)
O3': (78.262,140.770,-5.423)
OP1: (79.435,138.705,-6.201)
OP2: (80.292,140.038,-4.173)
C3': (82.565,141.972,-8.442)
C1': (82.089,144.176,-7.748)
C5': (80.194,141.131,-7.879)
O4': (80.868,143.455,-7.793)
C8: (82.090,143.619,-5.254)
O2': (83.124,143.857,-9.889)
C6: (84.148,146.036,-3.746)
C5: (83.356,145.145,-4.489)
C4: (83.292,145.350,-5.855)
P: (79.674,140.012,-5.525)
C4': (81.063,142.204,-8.505)
C2': (83.118,143.385,-8.557)
C2: (84.622,147.096,-5.743)
N1: (84.778,147.023,-4.417)
N3: (83.910,146.317,-6.553)
N6: (84.312,145.958,-2.425)
N7: (82.594,144.047,-4.122)
N9: (82.468,144.364,-6.345)
O5': (80.551,140.938,-6.487)
O3': (83.018,141.142,-9.507)
OP2: (80.292,140.038,-4.173)
C3': (82.565,141.972,-8.442)
C1': (82.089,144.176,-7.748)
C5': (80.194,141.131,-7.879)
O4': (80.868,143.455,-7.793)
C8: (82.090,143.619,-5.254)
O2': (83.124,143.857,-9.889)
C6: (84.148,146.036,-3.746)
C5: (83.356,145.145,-4.489)
C4: (83.292,145.350,-5.855)
P: (79.674,140.012,-5.525)
C4': (81.063,142.204,-8.505)
C2': (83.118,143.385,-8.557)
C2: (84.622,147.096,-5.743)
N1: (84.778,147.023,-4.417)
N3: (83.910,146.317,-6.553)
N6: (84.312,145.958,-2.425)
N7: (82.594,144.047,-4.122)
N9: (82.468,144.364,-6.345)
O5': (80.551,140.938,-6.487)
O3': (83.018,141.142,-9.507)
Image (generated by PyMOL):