ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01936:01937

Extra

PDB:
ATOM 1 O3' G A1935 106.572 128.228 128.860 1.00 56.60 O
ATOM 2 P C A1936 105.471 129.299 129.327 1.00 59.12 P
ATOM 3 OP1 C A1936 106.014 130.039 130.505 1.00 60.44 O
ATOM 4 OP2 C A1936 104.158 128.606 129.432 1.00 58.31 O
ATOM 5 O5' C A1936 105.408 130.332 128.121 1.00 54.74 O
ATOM 6 C5' C A1936 106.557 131.104 127.774 1.00 52.96 C
ATOM 7 C4' C A1936 106.274 131.907 126.538 1.00 53.01 C
ATOM 8 O4' C A1936 105.907 131.004 125.466 1.00 53.02 O
ATOM 9 C3' C A1936 105.089 132.847 126.652 1.00 51.75 C
ATOM 10 O3' C A1936 105.491 134.065 127.272 1.00 52.34 O
ATOM 11 C2' C A1936 104.672 133.028 125.197 1.00 50.09 C
ATOM 12 O2' C A1936 105.466 133.951 124.489 1.00 51.64 O
ATOM 13 C1' C A1936 104.966 131.642 124.622 1.00 51.38 C
ATOM 14 N1 C A1936 103.790 130.770 124.450 1.00 50.70 N
ATOM 15 C2 C A1936 102.965 130.980 123.336 1.00 50.30 C
ATOM 16 O2 C A1936 103.236 131.907 122.547 1.00 49.27 O
ATOM 17 N3 C A1936 101.896 130.176 123.148 1.00 48.50 N
ATOM 18 C4 C A1936 101.630 129.205 124.019 1.00 47.41 C
ATOM 19 N4 C A1936 100.570 128.437 123.779 1.00 47.69 N
ATOM 20 C5 C A1936 102.442 128.977 125.170 1.00 47.91 C
ATOM 21 C6 C A1936 103.502 129.773 125.344 1.00 48.43 C
ATOM 22 P A A1937 104.508 134.795 128.306 1.00 52.61 P
ATOM 23 OP1 A A1937 105.135 136.080 128.709 1.00 56.62 O
ATOM 24 OP2 A A1937 104.090 133.815 129.342 1.00 52.32 O
ATOM 25 O5' A A1937 103.244 135.178 127.428 1.00 54.46 O
TER

ATOM 1 O3' C B1936 105.491 134.065 127.272 1.00 52.34 O
ATOM 2 P A B1937 104.508 134.795 128.306 1.00 52.61 P
ATOM 3 OP1 A B1937 105.135 136.080 128.709 1.00 56.62 O
ATOM 4 OP2 A B1937 104.090 133.815 129.342 1.00 52.32 O
ATOM 5 O5' A B1937 103.244 135.178 127.428 1.00 54.46 O
ATOM 6 C5' A B1937 103.283 136.297 126.520 1.00 52.63 C
ATOM 7 C4' A B1937 101.949 136.442 125.839 1.00 50.67 C
ATOM 8 O4' A B1937 101.722 135.268 125.016 1.00 49.99 O
ATOM 9 C3' A B1937 100.769 136.456 126.799 1.00 50.26 C
ATOM 10 O3' A B1937 100.536 137.752 127.337 1.00 50.11 O
ATOM 11 C2' A B1937 99.635 135.948 125.925 1.00 49.37 C
ATOM 12 O2' A B1937 99.132 136.948 125.058 1.00 48.36 O
ATOM 13 C1' A B1937 100.360 134.880 125.102 1.00 49.28 C
ATOM 14 N9 A B1937 100.307 133.546 125.697 1.00 48.07 N
ATOM 15 C8 A B1937 101.174 132.987 126.605 1.00 48.02 C
ATOM 16 N7 A B1937 100.861 131.762 126.952 1.00 46.85 N
ATOM 17 C5 A B1937 99.711 131.495 126.224 1.00 47.89 C
ATOM 18 C6 A B1937 98.884 130.359 126.143 1.00 47.68 C
ATOM 19 N6 A B1937 99.094 129.238 126.832 1.00 45.37 N
ATOM 20 N1 A B1937 97.817 130.418 125.315 1.00 48.03 N
ATOM 21 C2 A B1937 97.603 131.546 124.626 1.00 48.24 C
ATOM 22 N3 A B1937 98.304 132.679 124.622 1.00 47.64 N
ATOM 23 C4 A B1937 99.358 132.586 125.448 1.00 47.89 C
ATOM 24 P U B1938 99.781 137.903 128.746 1.00 49.60 P
ATOM 25 OP1 U B1938 99.680 139.349 129.047 1.00 46.11 O
ATOM 26 OP2 U B1938 100.422 136.986 129.720 1.00 48.45 O
ATOM 27 O5' U B1938 98.324 137.317 128.463 1.00 50.13 O
TER

Atoms:
C2: (102.965,130.980,123.336)
OP1: (106.014,130.039,130.505)
OP2: (104.158,128.606,129.432)
C4: (101.630,129.205,124.019)
O5': (105.408,130.332,128.121)
C3': (105.089,132.847,126.652)
C1': (104.966,131.642,124.622)
O4': (105.907,131.004,125.466)
C5': (106.557,131.104,127.774)
P: (105.471,129.299,129.327)
O2: (103.236,131.907,122.547)
C4': (106.274,131.907,126.538)
C2': (104.672,133.028,125.197)
O2': (105.466,133.951,124.489)
N1: (103.790,130.770,124.450)
N3: (101.896,130.176,123.148)
N4: (100.570,128.437,123.779)
C6: (103.502,129.773,125.344)
C5: (102.442,128.977,125.170)
O3': (105.491,134.065,127.272)
OP1: (105.135,136.080,128.709)
OP2: (104.090,133.815,129.342)
C3': (100.769,136.456,126.799)
C1': (100.360,134.880,125.102)
C5': (103.283,136.297,126.520)
O4': (101.722,135.268,125.016)
C8: (101.174,132.987,126.605)
O2': (99.132,136.948,125.058)
C6: (98.884,130.359,126.143)
C5: (99.711,131.495,126.224)
C4: (99.358,132.586,125.448)
P: (104.508,134.795,128.306)
C4': (101.949,136.442,125.839)
C2': (99.635,135.948,125.925)
C2: (97.603,131.546,124.626)
N1: (97.817,130.418,125.315)
N3: (98.304,132.679,124.622)
N6: (99.094,129.238,126.832)
N7: (100.861,131.762,126.952)
N9: (100.307,133.546,125.697)
O5': (103.244,135.178,127.428)
O3': (100.536,137.752,127.337)
Image (generated by PyMOL):
PyMOL image
show in jmol