Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:028:027
Extra
PDB:
ATOM 1 O3' A A 27 44.408 117.915 32.016 1.00 41.06 O
ATOM 2 P G A 28 45.695 118.049 31.060 1.00 42.89 P
ATOM 3 OP1 G A 28 45.895 116.750 30.386 1.00 42.58 O
ATOM 4 OP2 G A 28 46.813 118.635 31.833 1.00 46.12 O
ATOM 5 O5' G A 28 45.246 119.130 29.978 1.00 43.29 O
ATOM 6 C5' G A 28 44.249 118.811 28.999 1.00 42.35 C
ATOM 7 C4' G A 28 43.802 120.056 28.272 1.00 43.32 C
ATOM 8 O4' G A 28 43.252 121.008 29.220 1.00 42.82 O
ATOM 9 C3' G A 28 44.876 120.859 27.563 1.00 44.33 C
ATOM 10 O3' G A 28 45.249 120.307 26.316 1.00 44.50 O
ATOM 11 C2' G A 28 44.190 122.203 27.403 1.00 44.00 C
ATOM 12 O2' G A 28 43.216 122.186 26.382 1.00 44.41 O
ATOM 13 C1' G A 28 43.497 122.328 28.759 1.00 44.34 C
ATOM 14 N9 G A 28 44.357 123.013 29.723 1.00 45.97 N
ATOM 15 C8 G A 28 45.066 122.462 30.765 1.00 45.38 C
ATOM 16 N7 G A 28 45.749 123.347 31.443 1.00 45.68 N
ATOM 17 C5 G A 28 45.476 124.551 30.810 1.00 45.37 C
ATOM 18 C6 G A 28 45.931 125.864 31.096 1.00 45.56 C
ATOM 19 O6 G A 28 46.693 126.238 31.996 1.00 45.24 O
ATOM 20 N1 G A 28 45.407 126.790 30.199 1.00 46.15 N
ATOM 21 C2 G A 28 44.560 126.492 29.158 1.00 46.62 C
ATOM 22 N2 G A 28 44.169 127.517 28.393 1.00 47.72 N
ATOM 23 N3 G A 28 44.127 125.276 28.885 1.00 46.12 N
ATOM 24 C4 G A 28 44.619 124.361 29.746 1.00 46.11 C
ATOM 25 P G A 29 46.752 120.506 25.784 1.00 44.95 P
ATOM 26 OP1 G A 29 46.855 119.743 24.511 1.00 45.50 O
ATOM 27 OP2 G A 29 47.702 120.212 26.888 1.00 44.79 O
ATOM 28 O5' G A 29 46.836 122.065 25.465 1.00 44.13 O
TER
ATOM 1 O3' C B 26 45.136 117.574 38.135 1.00 34.43 O
ATOM 2 P A B 27 46.139 117.726 36.890 1.00 37.51 P
ATOM 3 OP1 A B 27 46.561 116.354 36.522 1.00 37.20 O
ATOM 4 OP2 A B 27 47.166 118.752 37.193 1.00 37.78 O
ATOM 5 O5' A B 27 45.217 118.315 35.734 1.00 39.81 O
ATOM 6 C5' A B 27 44.132 117.545 35.209 1.00 39.60 C
ATOM 7 C4' A B 27 43.372 118.342 34.185 1.00 41.16 C
ATOM 8 O4' A B 27 42.803 119.522 34.810 1.00 40.69 O
ATOM 9 C3' A B 27 44.161 118.903 33.014 1.00 40.69 C
ATOM 10 O3' A B 27 44.408 117.915 32.016 1.00 41.06 O
ATOM 11 C2' A B 27 43.221 119.992 32.523 1.00 40.79 C
ATOM 12 O2' A B 27 42.112 119.459 31.830 1.00 41.09 O
ATOM 13 C1' A B 27 42.709 120.559 33.848 1.00 42.09 C
ATOM 14 N9 A B 27 43.489 121.702 34.318 1.00 43.42 N
ATOM 15 C8 A B 27 44.467 121.733 35.281 1.00 44.06 C
ATOM 16 N7 A B 27 44.961 122.927 35.494 1.00 44.08 N
ATOM 17 C5 A B 27 44.263 123.739 34.610 1.00 44.47 C
ATOM 18 C6 A B 27 44.306 125.126 34.356 1.00 44.45 C
ATOM 19 N6 A B 27 45.109 125.976 34.999 1.00 43.70 N
ATOM 20 N1 A B 27 43.481 125.615 33.404 1.00 44.22 N
ATOM 21 C2 A B 27 42.675 124.766 32.758 1.00 44.93 C
ATOM 22 N3 A B 27 42.537 123.450 32.913 1.00 45.12 N
ATOM 23 C4 A B 27 43.366 122.994 33.868 1.00 44.44 C
ATOM 24 P G B 28 45.695 118.049 31.060 1.00 42.89 P
ATOM 25 OP1 G B 28 45.895 116.750 30.386 1.00 42.58 O
ATOM 26 OP2 G B 28 46.813 118.635 31.833 1.00 46.12 O
ATOM 27 O5' G B 28 45.246 119.130 29.978 1.00 43.29 O
TER
ATOM 2 P G A 28 45.695 118.049 31.060 1.00 42.89 P
ATOM 3 OP1 G A 28 45.895 116.750 30.386 1.00 42.58 O
ATOM 4 OP2 G A 28 46.813 118.635 31.833 1.00 46.12 O
ATOM 5 O5' G A 28 45.246 119.130 29.978 1.00 43.29 O
ATOM 6 C5' G A 28 44.249 118.811 28.999 1.00 42.35 C
ATOM 7 C4' G A 28 43.802 120.056 28.272 1.00 43.32 C
ATOM 8 O4' G A 28 43.252 121.008 29.220 1.00 42.82 O
ATOM 9 C3' G A 28 44.876 120.859 27.563 1.00 44.33 C
ATOM 10 O3' G A 28 45.249 120.307 26.316 1.00 44.50 O
ATOM 11 C2' G A 28 44.190 122.203 27.403 1.00 44.00 C
ATOM 12 O2' G A 28 43.216 122.186 26.382 1.00 44.41 O
ATOM 13 C1' G A 28 43.497 122.328 28.759 1.00 44.34 C
ATOM 14 N9 G A 28 44.357 123.013 29.723 1.00 45.97 N
ATOM 15 C8 G A 28 45.066 122.462 30.765 1.00 45.38 C
ATOM 16 N7 G A 28 45.749 123.347 31.443 1.00 45.68 N
ATOM 17 C5 G A 28 45.476 124.551 30.810 1.00 45.37 C
ATOM 18 C6 G A 28 45.931 125.864 31.096 1.00 45.56 C
ATOM 19 O6 G A 28 46.693 126.238 31.996 1.00 45.24 O
ATOM 20 N1 G A 28 45.407 126.790 30.199 1.00 46.15 N
ATOM 21 C2 G A 28 44.560 126.492 29.158 1.00 46.62 C
ATOM 22 N2 G A 28 44.169 127.517 28.393 1.00 47.72 N
ATOM 23 N3 G A 28 44.127 125.276 28.885 1.00 46.12 N
ATOM 24 C4 G A 28 44.619 124.361 29.746 1.00 46.11 C
ATOM 25 P G A 29 46.752 120.506 25.784 1.00 44.95 P
ATOM 26 OP1 G A 29 46.855 119.743 24.511 1.00 45.50 O
ATOM 27 OP2 G A 29 47.702 120.212 26.888 1.00 44.79 O
ATOM 28 O5' G A 29 46.836 122.065 25.465 1.00 44.13 O
TER
ATOM 1 O3' C B 26 45.136 117.574 38.135 1.00 34.43 O
ATOM 2 P A B 27 46.139 117.726 36.890 1.00 37.51 P
ATOM 3 OP1 A B 27 46.561 116.354 36.522 1.00 37.20 O
ATOM 4 OP2 A B 27 47.166 118.752 37.193 1.00 37.78 O
ATOM 5 O5' A B 27 45.217 118.315 35.734 1.00 39.81 O
ATOM 6 C5' A B 27 44.132 117.545 35.209 1.00 39.60 C
ATOM 7 C4' A B 27 43.372 118.342 34.185 1.00 41.16 C
ATOM 8 O4' A B 27 42.803 119.522 34.810 1.00 40.69 O
ATOM 9 C3' A B 27 44.161 118.903 33.014 1.00 40.69 C
ATOM 10 O3' A B 27 44.408 117.915 32.016 1.00 41.06 O
ATOM 11 C2' A B 27 43.221 119.992 32.523 1.00 40.79 C
ATOM 12 O2' A B 27 42.112 119.459 31.830 1.00 41.09 O
ATOM 13 C1' A B 27 42.709 120.559 33.848 1.00 42.09 C
ATOM 14 N9 A B 27 43.489 121.702 34.318 1.00 43.42 N
ATOM 15 C8 A B 27 44.467 121.733 35.281 1.00 44.06 C
ATOM 16 N7 A B 27 44.961 122.927 35.494 1.00 44.08 N
ATOM 17 C5 A B 27 44.263 123.739 34.610 1.00 44.47 C
ATOM 18 C6 A B 27 44.306 125.126 34.356 1.00 44.45 C
ATOM 19 N6 A B 27 45.109 125.976 34.999 1.00 43.70 N
ATOM 20 N1 A B 27 43.481 125.615 33.404 1.00 44.22 N
ATOM 21 C2 A B 27 42.675 124.766 32.758 1.00 44.93 C
ATOM 22 N3 A B 27 42.537 123.450 32.913 1.00 45.12 N
ATOM 23 C4 A B 27 43.366 122.994 33.868 1.00 44.44 C
ATOM 24 P G B 28 45.695 118.049 31.060 1.00 42.89 P
ATOM 25 OP1 G B 28 45.895 116.750 30.386 1.00 42.58 O
ATOM 26 OP2 G B 28 46.813 118.635 31.833 1.00 46.12 O
ATOM 27 O5' G B 28 45.246 119.130 29.978 1.00 43.29 O
TER
Atoms:
OP1: (45.895,116.750,30.386)
OP2: (46.813,118.635,31.833)
C3': (44.876,120.859,27.563)
C1': (43.497,122.328,28.759)
C5': (44.249,118.811,28.999)
O6: (46.693,126.238,31.996)
O4': (43.252,121.008,29.220)
C8: (45.066,122.462,30.765)
C2: (44.560,126.492,29.158)
C6: (45.931,125.864,31.096)
C5: (45.476,124.551,30.810)
C4: (44.619,124.361,29.746)
P: (45.695,118.049,31.060)
C4': (43.802,120.056,28.272)
C2': (44.190,122.203,27.403)
O2': (43.216,122.186,26.382)
N1: (45.407,126.790,30.199)
N2: (44.169,127.517,28.393)
N3: (44.127,125.276,28.885)
N7: (45.749,123.347,31.443)
N9: (44.357,123.013,29.723)
O5': (45.246,119.130,29.978)
O3': (45.249,120.307,26.316)
OP2: (46.813,118.635,31.833)
C3': (44.876,120.859,27.563)
C1': (43.497,122.328,28.759)
C5': (44.249,118.811,28.999)
O6: (46.693,126.238,31.996)
O4': (43.252,121.008,29.220)
C8: (45.066,122.462,30.765)
C2: (44.560,126.492,29.158)
C6: (45.931,125.864,31.096)
C5: (45.476,124.551,30.810)
C4: (44.619,124.361,29.746)
P: (45.695,118.049,31.060)
C4': (43.802,120.056,28.272)
C2': (44.190,122.203,27.403)
O2': (43.216,122.186,26.382)
N1: (45.407,126.790,30.199)
N2: (44.169,127.517,28.393)
N3: (44.127,125.276,28.885)
N7: (45.749,123.347,31.443)
N9: (44.357,123.013,29.723)
O5': (45.246,119.130,29.978)
O3': (45.249,120.307,26.316)
OP1: (46.561,116.354,36.522)
OP2: (47.166,118.752,37.193)
C3': (44.161,118.903,33.014)
C1': (42.709,120.559,33.848)
C5': (44.132,117.545,35.209)
O4': (42.803,119.522,34.810)
C8: (44.467,121.733,35.281)
O2': (42.112,119.459,31.830)
C6: (44.306,125.126,34.356)
C5: (44.263,123.739,34.610)
C4: (43.366,122.994,33.868)
P: (46.139,117.726,36.890)
C4': (43.372,118.342,34.185)
C2': (43.221,119.992,32.523)
C2: (42.675,124.766,32.758)
N1: (43.481,125.615,33.404)
N3: (42.537,123.450,32.913)
N6: (45.109,125.976,34.999)
N7: (44.961,122.927,35.494)
N9: (43.489,121.702,34.318)
O5': (45.217,118.315,35.734)
O3': (44.408,117.915,32.016)
OP2: (47.166,118.752,37.193)
C3': (44.161,118.903,33.014)
C1': (42.709,120.559,33.848)
C5': (44.132,117.545,35.209)
O4': (42.803,119.522,34.810)
C8: (44.467,121.733,35.281)
O2': (42.112,119.459,31.830)
C6: (44.306,125.126,34.356)
C5: (44.263,123.739,34.610)
C4: (43.366,122.994,33.868)
P: (46.139,117.726,36.890)
C4': (43.372,118.342,34.185)
C2': (43.221,119.992,32.523)
C2: (42.675,124.766,32.758)
N1: (43.481,125.615,33.404)
N3: (42.537,123.450,32.913)
N6: (45.109,125.976,34.999)
N7: (44.961,122.927,35.494)
N9: (43.489,121.702,34.318)
O5': (45.217,118.315,35.734)
O3': (44.408,117.915,32.016)
Image (generated by PyMOL):