Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12677:12678
Extra
PDB:
ATOM 1 O3' U A2676 10.837 14.234 50.789 1.00 57.85 O
ATOM 2 P C A2677 9.549 14.883 50.067 1.00 58.08 P
ATOM 3 OP1 C A2677 10.019 15.454 48.778 1.00 58.24 O
ATOM 4 OP2 C A2677 8.878 15.821 51.066 1.00 58.24 O
ATOM 5 O5' C A2677 8.627 13.603 49.792 1.00 58.08 O
ATOM 6 C5' C A2677 9.114 12.483 49.080 1.00 57.92 C
ATOM 7 C4' C A2677 8.258 11.273 49.325 1.00 57.88 C
ATOM 8 O4' C A2677 8.285 10.928 50.738 1.00 57.66 O
ATOM 9 C3' C A2677 6.781 11.428 49.017 1.00 58.20 C
ATOM 10 O3' C A2677 6.481 11.274 47.662 1.00 58.41 O
ATOM 11 C2' C A2677 6.141 10.365 49.880 1.00 58.07 C
ATOM 12 O2' C A2677 6.292 9.088 49.276 1.00 57.96 O
ATOM 13 C1' C A2677 7.015 10.431 51.131 1.00 57.78 C
ATOM 14 N1 C A2677 6.452 11.342 52.170 1.00 57.89 N
ATOM 15 C2 C A2677 5.447 10.913 53.032 1.00 57.93 C
ATOM 16 O2 C A2677 5.003 9.794 52.877 1.00 57.88 O
ATOM 17 N3 C A2677 4.958 11.692 54.013 1.00 58.03 N
ATOM 18 C4 C A2677 5.460 12.911 54.135 1.00 58.10 C
ATOM 19 N4 C A2677 4.974 13.678 55.097 1.00 58.22 N
ATOM 20 C5 C A2677 6.506 13.413 53.291 1.00 58.06 C
ATOM 21 C6 C A2677 6.972 12.597 52.338 1.00 57.95 C
ATOM 22 P A A2678 5.349 12.206 47.007 1.00 52.55 P
ATOM 23 OP1 A A2678 5.116 11.706 45.608 1.00 52.73 O
ATOM 24 OP2 A A2678 5.792 13.623 47.183 1.00 52.65 O
ATOM 25 O5' A A2678 4.063 11.919 47.932 1.00 52.64 O
TER
ATOM 1 O3' C B2677 6.481 11.274 47.662 1.00 58.41 O
ATOM 2 P A B2678 5.349 12.206 47.007 1.00 52.55 P
ATOM 3 OP1 A B2678 5.116 11.706 45.608 1.00 52.73 O
ATOM 4 OP2 A B2678 5.792 13.623 47.183 1.00 52.65 O
ATOM 5 O5' A B2678 4.063 11.919 47.932 1.00 52.64 O
ATOM 6 C5' A B2678 3.319 10.728 47.795 1.00 52.64 C
ATOM 7 C4' A B2678 2.325 10.561 48.909 1.00 52.68 C
ATOM 8 O4' A B2678 2.947 10.818 50.192 1.00 52.43 O
ATOM 9 C3' A B2678 1.141 11.489 48.880 1.00 53.05 C
ATOM 10 O3' A B2678 0.148 11.029 47.995 1.00 53.31 O
ATOM 11 C2' A B2678 0.684 11.460 50.322 1.00 52.96 C
ATOM 12 O2' A B2678 -0.045 10.281 50.562 1.00 52.93 O
ATOM 13 C1' A B2678 2.006 11.370 51.078 1.00 52.59 C
ATOM 14 N9 A B2678 2.483 12.704 51.498 1.00 52.63 N
ATOM 15 C8 A B2678 3.587 13.381 51.029 1.00 52.56 C
ATOM 16 N7 A B2678 3.766 14.575 51.544 1.00 52.65 N
ATOM 17 C5 A B2678 2.701 14.693 52.412 1.00 52.79 C
ATOM 18 C6 A B2678 2.324 15.732 53.265 1.00 52.94 C
ATOM 19 N6 A B2678 3.015 16.848 53.356 1.00 52.98 N
ATOM 20 N1 A B2678 1.227 15.562 54.021 1.00 53.06 N
ATOM 21 C2 A B2678 0.559 14.414 53.893 1.00 53.03 C
ATOM 22 N3 A B2678 0.805 13.367 53.133 1.00 52.90 N
ATOM 23 C4 A B2678 1.905 13.561 52.403 1.00 52.77 C
ATOM 24 P C B2679 -0.425 11.957 46.810 1.00 53.65 P
ATOM 25 OP1 C B2679 -0.730 11.043 45.679 1.00 53.75 O
ATOM 26 OP2 C B2679 0.525 13.076 46.595 1.00 53.63 O
ATOM 27 O5' C B2679 -1.771 12.511 47.435 1.00 53.93 O
TER
ATOM 2 P C A2677 9.549 14.883 50.067 1.00 58.08 P
ATOM 3 OP1 C A2677 10.019 15.454 48.778 1.00 58.24 O
ATOM 4 OP2 C A2677 8.878 15.821 51.066 1.00 58.24 O
ATOM 5 O5' C A2677 8.627 13.603 49.792 1.00 58.08 O
ATOM 6 C5' C A2677 9.114 12.483 49.080 1.00 57.92 C
ATOM 7 C4' C A2677 8.258 11.273 49.325 1.00 57.88 C
ATOM 8 O4' C A2677 8.285 10.928 50.738 1.00 57.66 O
ATOM 9 C3' C A2677 6.781 11.428 49.017 1.00 58.20 C
ATOM 10 O3' C A2677 6.481 11.274 47.662 1.00 58.41 O
ATOM 11 C2' C A2677 6.141 10.365 49.880 1.00 58.07 C
ATOM 12 O2' C A2677 6.292 9.088 49.276 1.00 57.96 O
ATOM 13 C1' C A2677 7.015 10.431 51.131 1.00 57.78 C
ATOM 14 N1 C A2677 6.452 11.342 52.170 1.00 57.89 N
ATOM 15 C2 C A2677 5.447 10.913 53.032 1.00 57.93 C
ATOM 16 O2 C A2677 5.003 9.794 52.877 1.00 57.88 O
ATOM 17 N3 C A2677 4.958 11.692 54.013 1.00 58.03 N
ATOM 18 C4 C A2677 5.460 12.911 54.135 1.00 58.10 C
ATOM 19 N4 C A2677 4.974 13.678 55.097 1.00 58.22 N
ATOM 20 C5 C A2677 6.506 13.413 53.291 1.00 58.06 C
ATOM 21 C6 C A2677 6.972 12.597 52.338 1.00 57.95 C
ATOM 22 P A A2678 5.349 12.206 47.007 1.00 52.55 P
ATOM 23 OP1 A A2678 5.116 11.706 45.608 1.00 52.73 O
ATOM 24 OP2 A A2678 5.792 13.623 47.183 1.00 52.65 O
ATOM 25 O5' A A2678 4.063 11.919 47.932 1.00 52.64 O
TER
ATOM 1 O3' C B2677 6.481 11.274 47.662 1.00 58.41 O
ATOM 2 P A B2678 5.349 12.206 47.007 1.00 52.55 P
ATOM 3 OP1 A B2678 5.116 11.706 45.608 1.00 52.73 O
ATOM 4 OP2 A B2678 5.792 13.623 47.183 1.00 52.65 O
ATOM 5 O5' A B2678 4.063 11.919 47.932 1.00 52.64 O
ATOM 6 C5' A B2678 3.319 10.728 47.795 1.00 52.64 C
ATOM 7 C4' A B2678 2.325 10.561 48.909 1.00 52.68 C
ATOM 8 O4' A B2678 2.947 10.818 50.192 1.00 52.43 O
ATOM 9 C3' A B2678 1.141 11.489 48.880 1.00 53.05 C
ATOM 10 O3' A B2678 0.148 11.029 47.995 1.00 53.31 O
ATOM 11 C2' A B2678 0.684 11.460 50.322 1.00 52.96 C
ATOM 12 O2' A B2678 -0.045 10.281 50.562 1.00 52.93 O
ATOM 13 C1' A B2678 2.006 11.370 51.078 1.00 52.59 C
ATOM 14 N9 A B2678 2.483 12.704 51.498 1.00 52.63 N
ATOM 15 C8 A B2678 3.587 13.381 51.029 1.00 52.56 C
ATOM 16 N7 A B2678 3.766 14.575 51.544 1.00 52.65 N
ATOM 17 C5 A B2678 2.701 14.693 52.412 1.00 52.79 C
ATOM 18 C6 A B2678 2.324 15.732 53.265 1.00 52.94 C
ATOM 19 N6 A B2678 3.015 16.848 53.356 1.00 52.98 N
ATOM 20 N1 A B2678 1.227 15.562 54.021 1.00 53.06 N
ATOM 21 C2 A B2678 0.559 14.414 53.893 1.00 53.03 C
ATOM 22 N3 A B2678 0.805 13.367 53.133 1.00 52.90 N
ATOM 23 C4 A B2678 1.905 13.561 52.403 1.00 52.77 C
ATOM 24 P C B2679 -0.425 11.957 46.810 1.00 53.65 P
ATOM 25 OP1 C B2679 -0.730 11.043 45.679 1.00 53.75 O
ATOM 26 OP2 C B2679 0.525 13.076 46.595 1.00 53.63 O
ATOM 27 O5' C B2679 -1.771 12.511 47.435 1.00 53.93 O
TER
Atoms:
C2: (5.447,10.913,53.032)
OP1: (10.019,15.454,48.778)
OP2: (8.878,15.821,51.066)
C4: (5.460,12.911,54.135)
O5': (8.627,13.603,49.792)
C3': (6.781,11.428,49.017)
C1': (7.015,10.431,51.131)
O4': (8.285,10.928,50.738)
C5': (9.114,12.483,49.080)
P: (9.549,14.883,50.067)
O2: (5.003,9.794,52.877)
C4': (8.258,11.273,49.325)
C2': (6.141,10.365,49.880)
O2': (6.292,9.088,49.276)
N1: (6.452,11.342,52.170)
N3: (4.958,11.692,54.013)
N4: (4.974,13.678,55.097)
C6: (6.972,12.597,52.338)
C5: (6.506,13.413,53.291)
O3': (6.481,11.274,47.662)
OP1: (10.019,15.454,48.778)
OP2: (8.878,15.821,51.066)
C4: (5.460,12.911,54.135)
O5': (8.627,13.603,49.792)
C3': (6.781,11.428,49.017)
C1': (7.015,10.431,51.131)
O4': (8.285,10.928,50.738)
C5': (9.114,12.483,49.080)
P: (9.549,14.883,50.067)
O2: (5.003,9.794,52.877)
C4': (8.258,11.273,49.325)
C2': (6.141,10.365,49.880)
O2': (6.292,9.088,49.276)
N1: (6.452,11.342,52.170)
N3: (4.958,11.692,54.013)
N4: (4.974,13.678,55.097)
C6: (6.972,12.597,52.338)
C5: (6.506,13.413,53.291)
O3': (6.481,11.274,47.662)
OP1: (5.116,11.706,45.608)
OP2: (5.792,13.623,47.183)
C3': (1.141,11.489,48.880)
C1': (2.006,11.370,51.078)
C5': (3.319,10.728,47.795)
O4': (2.947,10.818,50.192)
C8: (3.587,13.381,51.029)
O2': (-0.045,10.281,50.562)
C6: (2.324,15.732,53.265)
C5: (2.701,14.693,52.412)
C4: (1.905,13.561,52.403)
P: (5.349,12.206,47.007)
C4': (2.325,10.561,48.909)
C2': (0.684,11.460,50.322)
C2: (0.559,14.414,53.893)
N1: (1.227,15.562,54.021)
N3: (0.805,13.367,53.133)
N6: (3.015,16.848,53.356)
N7: (3.766,14.575,51.544)
N9: (2.483,12.704,51.498)
O5': (4.063,11.919,47.932)
O3': (0.148,11.029,47.995)
OP2: (5.792,13.623,47.183)
C3': (1.141,11.489,48.880)
C1': (2.006,11.370,51.078)
C5': (3.319,10.728,47.795)
O4': (2.947,10.818,50.192)
C8: (3.587,13.381,51.029)
O2': (-0.045,10.281,50.562)
C6: (2.324,15.732,53.265)
C5: (2.701,14.693,52.412)
C4: (1.905,13.561,52.403)
P: (5.349,12.206,47.007)
C4': (2.325,10.561,48.909)
C2': (0.684,11.460,50.322)
C2: (0.559,14.414,53.893)
N1: (1.227,15.562,54.021)
N3: (0.805,13.367,53.133)
N6: (3.015,16.848,53.356)
N7: (3.766,14.575,51.544)
N9: (2.483,12.704,51.498)
O5': (4.063,11.919,47.932)
O3': (0.148,11.029,47.995)
Image (generated by PyMOL):