Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J6S:A3:A2
Extra
PDB:
ATOM 1 O3' A A 2 7.568 11.846 17.478 1.00 6.55 O
ATOM 2 P G A 3 7.489 11.615 15.897 1.00 7.64 P
ATOM 3 OP1 G A 3 8.491 10.524 15.603 1.00 8.43 O
ATOM 4 OP2 G A 3 7.608 12.896 15.155 1.00 9.09 O
ATOM 5 O5' G A 3 5.989 11.118 15.672 1.00 7.36 O
ATOM 6 C5' G A 3 5.616 9.819 16.020 1.00 7.12 C
ATOM 7 C4' G A 3 4.110 9.703 15.968 1.00 6.61 C
ATOM 8 O4' G A 3 3.492 10.657 16.862 1.00 6.20 O
ATOM 9 C3' G A 3 3.515 10.100 14.630 1.00 7.60 C
ATOM 10 O3' G A 3 3.703 9.048 13.665 1.00 8.48 O
ATOM 11 C2' G A 3 2.062 10.303 15.017 1.00 6.34 C
ATOM 12 O2' G A 3 1.374 9.092 15.262 1.00 7.67 O
ATOM 13 C1' G A 3 2.250 11.056 16.338 1.00 6.74 C
ATOM 14 N9 G A 3 2.281 12.521 16.194 1.00 5.39 N
ATOM 15 C8 G A 3 3.400 13.297 16.122 1.00 5.66 C
ATOM 16 N7 G A 3 3.145 14.577 16.122 1.00 5.07 N
ATOM 17 C5 G A 3 1.759 14.642 16.139 1.00 5.15 C
ATOM 18 C6 G A 3 0.899 15.775 16.202 1.00 4.49 C
ATOM 19 O6 G A 3 1.209 16.942 16.233 1.00 4.84 O
ATOM 20 N1 G A 3 -0.451 15.395 16.269 1.00 4.95 N
ATOM 21 C2 G A 3 -0.903 14.071 16.258 1.00 5.26 C
ATOM 22 N2 G A 3 -2.202 13.899 16.291 1.00 4.61 N
ATOM 23 N3 G A 3 -0.104 13.021 16.199 1.00 4.75 N
ATOM 24 C4 G A 3 1.210 13.377 16.157 1.00 4.85 C
ATOM 25 P G A 4 3.671 9.389 12.096 1.00 9.65 P
ATOM 26 OP1 G A 4 4.162 8.152 11.384 1.00 10.62 O
ATOM 27 OP2 G A 4 4.340 10.687 11.839 1.00 10.05 O
ATOM 28 O5' G A 4 2.136 9.589 11.782 1.00 8.97 O
TER
ATOM 1 O3' G B 1 10.550 16.889 20.679 1.00 7.07 O
ATOM 2 P A B 2 10.274 16.426 19.183 1.00 7.47 P
ATOM 3 OP1 A B 2 11.591 15.893 18.712 1.00 9.06 O
ATOM 4 OP2 A B 2 9.589 17.494 18.434 1.00 7.91 O
ATOM 5 O5' A B 2 9.265 15.236 19.463 1.00 7.07 O
ATOM 6 C5' A B 2 8.357 14.782 18.504 1.00 6.96 C
ATOM 7 C4' A B 2 7.589 13.641 19.074 1.00 6.46 C
ATOM 8 O4' A B 2 6.595 14.141 19.999 1.00 6.11 O
ATOM 9 C3' A B 2 6.774 12.855 18.079 1.00 6.73 C
ATOM 10 O3' A B 2 7.568 11.846 17.478 1.00 6.55 O
ATOM 11 C2' A B 2 5.689 12.246 18.947 1.00 6.64 C
ATOM 12 O2' A B 2 6.174 11.161 19.670 1.00 7.21 O
ATOM 13 C1' A B 2 5.431 13.359 19.943 1.00 5.60 C
ATOM 14 N9 A B 2 4.318 14.260 19.650 1.00 5.39 N
ATOM 15 C8 A B 2 4.380 15.620 19.532 1.00 5.11 C
ATOM 16 N7 A B 2 3.202 16.192 19.420 1.00 5.05 N
ATOM 17 C5 A B 2 2.313 15.131 19.474 1.00 4.95 C
ATOM 18 C6 A B 2 0.898 15.061 19.446 1.00 4.85 C
ATOM 19 N6 A B 2 0.119 16.150 19.373 1.00 5.32 N
ATOM 20 N1 A B 2 0.320 13.846 19.479 1.00 5.12 N
ATOM 21 C2 A B 2 1.111 12.783 19.548 1.00 5.78 C
ATOM 22 N3 A B 2 2.435 12.709 19.619 1.00 5.66 N
ATOM 23 C4 A B 2 2.991 13.932 19.574 1.00 5.34 C
ATOM 24 P G B 3 7.489 11.615 15.897 1.00 7.64 P
ATOM 25 OP1 G B 3 8.491 10.524 15.603 1.00 8.43 O
ATOM 26 OP2 G B 3 7.608 12.896 15.155 1.00 9.09 O
ATOM 27 O5' G B 3 5.989 11.118 15.672 1.00 7.36 O
TER
ATOM 2 P G A 3 7.489 11.615 15.897 1.00 7.64 P
ATOM 3 OP1 G A 3 8.491 10.524 15.603 1.00 8.43 O
ATOM 4 OP2 G A 3 7.608 12.896 15.155 1.00 9.09 O
ATOM 5 O5' G A 3 5.989 11.118 15.672 1.00 7.36 O
ATOM 6 C5' G A 3 5.616 9.819 16.020 1.00 7.12 C
ATOM 7 C4' G A 3 4.110 9.703 15.968 1.00 6.61 C
ATOM 8 O4' G A 3 3.492 10.657 16.862 1.00 6.20 O
ATOM 9 C3' G A 3 3.515 10.100 14.630 1.00 7.60 C
ATOM 10 O3' G A 3 3.703 9.048 13.665 1.00 8.48 O
ATOM 11 C2' G A 3 2.062 10.303 15.017 1.00 6.34 C
ATOM 12 O2' G A 3 1.374 9.092 15.262 1.00 7.67 O
ATOM 13 C1' G A 3 2.250 11.056 16.338 1.00 6.74 C
ATOM 14 N9 G A 3 2.281 12.521 16.194 1.00 5.39 N
ATOM 15 C8 G A 3 3.400 13.297 16.122 1.00 5.66 C
ATOM 16 N7 G A 3 3.145 14.577 16.122 1.00 5.07 N
ATOM 17 C5 G A 3 1.759 14.642 16.139 1.00 5.15 C
ATOM 18 C6 G A 3 0.899 15.775 16.202 1.00 4.49 C
ATOM 19 O6 G A 3 1.209 16.942 16.233 1.00 4.84 O
ATOM 20 N1 G A 3 -0.451 15.395 16.269 1.00 4.95 N
ATOM 21 C2 G A 3 -0.903 14.071 16.258 1.00 5.26 C
ATOM 22 N2 G A 3 -2.202 13.899 16.291 1.00 4.61 N
ATOM 23 N3 G A 3 -0.104 13.021 16.199 1.00 4.75 N
ATOM 24 C4 G A 3 1.210 13.377 16.157 1.00 4.85 C
ATOM 25 P G A 4 3.671 9.389 12.096 1.00 9.65 P
ATOM 26 OP1 G A 4 4.162 8.152 11.384 1.00 10.62 O
ATOM 27 OP2 G A 4 4.340 10.687 11.839 1.00 10.05 O
ATOM 28 O5' G A 4 2.136 9.589 11.782 1.00 8.97 O
TER
ATOM 1 O3' G B 1 10.550 16.889 20.679 1.00 7.07 O
ATOM 2 P A B 2 10.274 16.426 19.183 1.00 7.47 P
ATOM 3 OP1 A B 2 11.591 15.893 18.712 1.00 9.06 O
ATOM 4 OP2 A B 2 9.589 17.494 18.434 1.00 7.91 O
ATOM 5 O5' A B 2 9.265 15.236 19.463 1.00 7.07 O
ATOM 6 C5' A B 2 8.357 14.782 18.504 1.00 6.96 C
ATOM 7 C4' A B 2 7.589 13.641 19.074 1.00 6.46 C
ATOM 8 O4' A B 2 6.595 14.141 19.999 1.00 6.11 O
ATOM 9 C3' A B 2 6.774 12.855 18.079 1.00 6.73 C
ATOM 10 O3' A B 2 7.568 11.846 17.478 1.00 6.55 O
ATOM 11 C2' A B 2 5.689 12.246 18.947 1.00 6.64 C
ATOM 12 O2' A B 2 6.174 11.161 19.670 1.00 7.21 O
ATOM 13 C1' A B 2 5.431 13.359 19.943 1.00 5.60 C
ATOM 14 N9 A B 2 4.318 14.260 19.650 1.00 5.39 N
ATOM 15 C8 A B 2 4.380 15.620 19.532 1.00 5.11 C
ATOM 16 N7 A B 2 3.202 16.192 19.420 1.00 5.05 N
ATOM 17 C5 A B 2 2.313 15.131 19.474 1.00 4.95 C
ATOM 18 C6 A B 2 0.898 15.061 19.446 1.00 4.85 C
ATOM 19 N6 A B 2 0.119 16.150 19.373 1.00 5.32 N
ATOM 20 N1 A B 2 0.320 13.846 19.479 1.00 5.12 N
ATOM 21 C2 A B 2 1.111 12.783 19.548 1.00 5.78 C
ATOM 22 N3 A B 2 2.435 12.709 19.619 1.00 5.66 N
ATOM 23 C4 A B 2 2.991 13.932 19.574 1.00 5.34 C
ATOM 24 P G B 3 7.489 11.615 15.897 1.00 7.64 P
ATOM 25 OP1 G B 3 8.491 10.524 15.603 1.00 8.43 O
ATOM 26 OP2 G B 3 7.608 12.896 15.155 1.00 9.09 O
ATOM 27 O5' G B 3 5.989 11.118 15.672 1.00 7.36 O
TER
Atoms:
OP1: (8.491,10.524,15.603)
OP2: (7.608,12.896,15.155)
C3': (3.515,10.100,14.630)
C1': (2.250,11.056,16.338)
C5': (5.616,9.819,16.020)
O6: (1.209,16.942,16.233)
O4': (3.492,10.657,16.862)
C8: (3.400,13.297,16.122)
C2: (-0.903,14.071,16.258)
C6: (0.899,15.775,16.202)
C5: (1.759,14.642,16.139)
C4: (1.210,13.377,16.157)
P: (7.489,11.615,15.897)
C4': (4.110,9.703,15.968)
C2': (2.062,10.303,15.017)
O2': (1.374,9.092,15.262)
N1: (-0.451,15.395,16.269)
N2: (-2.202,13.899,16.291)
N3: (-0.104,13.021,16.199)
N7: (3.145,14.577,16.122)
N9: (2.281,12.521,16.194)
O5': (5.989,11.118,15.672)
O3': (3.703,9.048,13.665)
OP2: (7.608,12.896,15.155)
C3': (3.515,10.100,14.630)
C1': (2.250,11.056,16.338)
C5': (5.616,9.819,16.020)
O6: (1.209,16.942,16.233)
O4': (3.492,10.657,16.862)
C8: (3.400,13.297,16.122)
C2: (-0.903,14.071,16.258)
C6: (0.899,15.775,16.202)
C5: (1.759,14.642,16.139)
C4: (1.210,13.377,16.157)
P: (7.489,11.615,15.897)
C4': (4.110,9.703,15.968)
C2': (2.062,10.303,15.017)
O2': (1.374,9.092,15.262)
N1: (-0.451,15.395,16.269)
N2: (-2.202,13.899,16.291)
N3: (-0.104,13.021,16.199)
N7: (3.145,14.577,16.122)
N9: (2.281,12.521,16.194)
O5': (5.989,11.118,15.672)
O3': (3.703,9.048,13.665)
OP1: (11.591,15.893,18.712)
OP2: (9.589,17.494,18.434)
C3': (6.774,12.855,18.079)
C1': (5.431,13.359,19.943)
C5': (8.357,14.782,18.504)
O4': (6.595,14.141,19.999)
C8: (4.380,15.620,19.532)
O2': (6.174,11.161,19.670)
C6: (0.898,15.061,19.446)
C5: (2.313,15.131,19.474)
C4: (2.991,13.932,19.574)
P: (10.274,16.426,19.183)
C4': (7.589,13.641,19.074)
C2': (5.689,12.246,18.947)
C2: (1.111,12.783,19.548)
N1: (0.320,13.846,19.479)
N3: (2.435,12.709,19.619)
N6: (0.119,16.150,19.373)
N7: (3.202,16.192,19.420)
N9: (4.318,14.260,19.650)
O5': (9.265,15.236,19.463)
O3': (7.568,11.846,17.478)
OP2: (9.589,17.494,18.434)
C3': (6.774,12.855,18.079)
C1': (5.431,13.359,19.943)
C5': (8.357,14.782,18.504)
O4': (6.595,14.141,19.999)
C8: (4.380,15.620,19.532)
O2': (6.174,11.161,19.670)
C6: (0.898,15.061,19.446)
C5: (2.313,15.131,19.474)
C4: (2.991,13.932,19.574)
P: (10.274,16.426,19.183)
C4': (7.589,13.641,19.074)
C2': (5.689,12.246,18.947)
C2: (1.111,12.783,19.548)
N1: (0.320,13.846,19.479)
N3: (2.435,12.709,19.619)
N6: (0.119,16.150,19.373)
N7: (3.202,16.192,19.420)
N9: (4.318,14.260,19.650)
O5': (9.265,15.236,19.463)
O3': (7.568,11.846,17.478)
Image (generated by PyMOL):