Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01028:01029
Extra
PDB:
ATOM 1 O3' C A1027 35.308 94.830 97.281 1.00 25.04 O
ATOM 2 P C A1028 35.247 95.834 96.046 1.00 26.83 P
ATOM 3 OP1 C A1028 34.031 96.670 96.212 1.00 25.54 O
ATOM 4 OP2 C A1028 35.434 95.036 94.804 1.00 22.95 O
ATOM 5 O5' C A1028 36.529 96.751 96.255 1.00 27.40 O
ATOM 6 C5' C A1028 36.563 97.759 97.282 1.00 26.70 C
ATOM 7 C4' C A1028 37.827 98.574 97.167 1.00 27.76 C
ATOM 8 O4' C A1028 38.985 97.756 97.493 1.00 28.08 O
ATOM 9 C3' C A1028 38.136 99.105 95.774 1.00 26.13 C
ATOM 10 O3' C A1028 37.433 100.305 95.503 1.00 26.22 O
ATOM 11 C2' C A1028 39.629 99.360 95.860 1.00 25.80 C
ATOM 12 O2' C A1028 39.883 100.538 96.598 1.00 24.95 O
ATOM 13 C1' C A1028 40.082 98.153 96.681 1.00 26.20 C
ATOM 14 N1 C A1028 40.479 97.009 95.844 1.00 26.64 N
ATOM 15 C2 C A1028 41.790 96.955 95.353 1.00 26.59 C
ATOM 16 O2 C A1028 42.560 97.904 95.589 1.00 27.63 O
ATOM 17 N3 C A1028 42.182 95.876 94.636 1.00 26.34 N
ATOM 18 C4 C A1028 41.318 94.883 94.396 1.00 26.39 C
ATOM 19 N4 C A1028 41.750 93.820 93.707 1.00 21.68 N
ATOM 20 C5 C A1028 39.974 94.931 94.856 1.00 25.70 C
ATOM 21 C6 C A1028 39.598 96.002 95.565 1.00 24.70 C
ATOM 22 P A A1029 37.142 100.727 93.986 1.00 27.32 P
ATOM 23 OP1 A A1029 36.649 102.120 94.019 1.00 24.83 O
ATOM 24 OP2 A A1029 36.308 99.670 93.371 1.00 27.12 O
ATOM 25 O5' A A1029 38.578 100.680 93.287 1.00 30.48 O
TER
ATOM 1 O3' C B1028 37.433 100.305 95.503 1.00 26.22 O
ATOM 2 P A B1029 37.142 100.727 93.986 1.00 27.32 P
ATOM 3 OP1 A B1029 36.649 102.120 94.019 1.00 24.83 O
ATOM 4 OP2 A B1029 36.308 99.670 93.371 1.00 27.12 O
ATOM 5 O5' A B1029 38.578 100.680 93.287 1.00 30.48 O
ATOM 6 C5' A B1029 39.590 101.688 93.543 1.00 28.42 C
ATOM 7 C4' A B1029 40.854 101.347 92.791 1.00 28.68 C
ATOM 8 O4' A B1029 41.321 100.037 93.206 1.00 30.04 O
ATOM 9 C3' A B1029 40.679 101.247 91.285 1.00 27.67 C
ATOM 10 O3' A B1029 40.878 102.540 90.740 1.00 28.94 O
ATOM 11 C2' A B1029 41.767 100.257 90.876 1.00 28.73 C
ATOM 12 O2' A B1029 43.049 100.827 90.739 1.00 29.82 O
ATOM 13 C1' A B1029 41.790 99.310 92.079 1.00 30.35 C
ATOM 14 N9 A B1029 40.939 98.130 91.918 1.00 31.47 N
ATOM 15 C8 A B1029 39.603 98.033 92.210 1.00 33.30 C
ATOM 16 N7 A B1029 39.095 96.855 91.964 1.00 34.12 N
ATOM 17 C5 A B1029 40.166 96.126 91.478 1.00 31.27 C
ATOM 18 C6 A B1029 40.273 94.810 91.029 1.00 32.43 C
ATOM 19 N6 A B1029 39.242 93.961 90.987 1.00 32.83 N
ATOM 20 N1 A B1029 41.483 94.387 90.609 1.00 31.93 N
ATOM 21 C2 A B1029 42.499 95.245 90.633 1.00 30.52 C
ATOM 22 N3 A B1029 42.520 96.510 91.027 1.00 31.39 N
ATOM 23 C4 A B1029 41.307 96.895 91.445 1.00 30.34 C
ATOM 24 P G B1030 40.219 102.942 89.334 1.00 29.01 P
ATOM 25 OP1 G B1030 40.917 102.192 88.258 1.00 27.27 O
ATOM 26 OP2 G B1030 40.168 104.428 89.292 1.00 27.35 O
ATOM 27 O5' G B1030 38.734 102.397 89.444 1.00 30.67 O
TER
ATOM 2 P C A1028 35.247 95.834 96.046 1.00 26.83 P
ATOM 3 OP1 C A1028 34.031 96.670 96.212 1.00 25.54 O
ATOM 4 OP2 C A1028 35.434 95.036 94.804 1.00 22.95 O
ATOM 5 O5' C A1028 36.529 96.751 96.255 1.00 27.40 O
ATOM 6 C5' C A1028 36.563 97.759 97.282 1.00 26.70 C
ATOM 7 C4' C A1028 37.827 98.574 97.167 1.00 27.76 C
ATOM 8 O4' C A1028 38.985 97.756 97.493 1.00 28.08 O
ATOM 9 C3' C A1028 38.136 99.105 95.774 1.00 26.13 C
ATOM 10 O3' C A1028 37.433 100.305 95.503 1.00 26.22 O
ATOM 11 C2' C A1028 39.629 99.360 95.860 1.00 25.80 C
ATOM 12 O2' C A1028 39.883 100.538 96.598 1.00 24.95 O
ATOM 13 C1' C A1028 40.082 98.153 96.681 1.00 26.20 C
ATOM 14 N1 C A1028 40.479 97.009 95.844 1.00 26.64 N
ATOM 15 C2 C A1028 41.790 96.955 95.353 1.00 26.59 C
ATOM 16 O2 C A1028 42.560 97.904 95.589 1.00 27.63 O
ATOM 17 N3 C A1028 42.182 95.876 94.636 1.00 26.34 N
ATOM 18 C4 C A1028 41.318 94.883 94.396 1.00 26.39 C
ATOM 19 N4 C A1028 41.750 93.820 93.707 1.00 21.68 N
ATOM 20 C5 C A1028 39.974 94.931 94.856 1.00 25.70 C
ATOM 21 C6 C A1028 39.598 96.002 95.565 1.00 24.70 C
ATOM 22 P A A1029 37.142 100.727 93.986 1.00 27.32 P
ATOM 23 OP1 A A1029 36.649 102.120 94.019 1.00 24.83 O
ATOM 24 OP2 A A1029 36.308 99.670 93.371 1.00 27.12 O
ATOM 25 O5' A A1029 38.578 100.680 93.287 1.00 30.48 O
TER
ATOM 1 O3' C B1028 37.433 100.305 95.503 1.00 26.22 O
ATOM 2 P A B1029 37.142 100.727 93.986 1.00 27.32 P
ATOM 3 OP1 A B1029 36.649 102.120 94.019 1.00 24.83 O
ATOM 4 OP2 A B1029 36.308 99.670 93.371 1.00 27.12 O
ATOM 5 O5' A B1029 38.578 100.680 93.287 1.00 30.48 O
ATOM 6 C5' A B1029 39.590 101.688 93.543 1.00 28.42 C
ATOM 7 C4' A B1029 40.854 101.347 92.791 1.00 28.68 C
ATOM 8 O4' A B1029 41.321 100.037 93.206 1.00 30.04 O
ATOM 9 C3' A B1029 40.679 101.247 91.285 1.00 27.67 C
ATOM 10 O3' A B1029 40.878 102.540 90.740 1.00 28.94 O
ATOM 11 C2' A B1029 41.767 100.257 90.876 1.00 28.73 C
ATOM 12 O2' A B1029 43.049 100.827 90.739 1.00 29.82 O
ATOM 13 C1' A B1029 41.790 99.310 92.079 1.00 30.35 C
ATOM 14 N9 A B1029 40.939 98.130 91.918 1.00 31.47 N
ATOM 15 C8 A B1029 39.603 98.033 92.210 1.00 33.30 C
ATOM 16 N7 A B1029 39.095 96.855 91.964 1.00 34.12 N
ATOM 17 C5 A B1029 40.166 96.126 91.478 1.00 31.27 C
ATOM 18 C6 A B1029 40.273 94.810 91.029 1.00 32.43 C
ATOM 19 N6 A B1029 39.242 93.961 90.987 1.00 32.83 N
ATOM 20 N1 A B1029 41.483 94.387 90.609 1.00 31.93 N
ATOM 21 C2 A B1029 42.499 95.245 90.633 1.00 30.52 C
ATOM 22 N3 A B1029 42.520 96.510 91.027 1.00 31.39 N
ATOM 23 C4 A B1029 41.307 96.895 91.445 1.00 30.34 C
ATOM 24 P G B1030 40.219 102.942 89.334 1.00 29.01 P
ATOM 25 OP1 G B1030 40.917 102.192 88.258 1.00 27.27 O
ATOM 26 OP2 G B1030 40.168 104.428 89.292 1.00 27.35 O
ATOM 27 O5' G B1030 38.734 102.397 89.444 1.00 30.67 O
TER
Atoms:
C2: (41.790,96.955,95.353)
OP1: (34.031,96.670,96.212)
OP2: (35.434,95.036,94.804)
C4: (41.318,94.883,94.396)
O5': (36.529,96.751,96.255)
C3': (38.136,99.105,95.774)
C1': (40.082,98.153,96.681)
O4': (38.985,97.756,97.493)
C5': (36.563,97.759,97.282)
P: (35.247,95.834,96.046)
O2: (42.560,97.904,95.589)
C4': (37.827,98.574,97.167)
C2': (39.629,99.360,95.860)
O2': (39.883,100.538,96.598)
N1: (40.479,97.009,95.844)
N3: (42.182,95.876,94.636)
N4: (41.750,93.820,93.707)
C6: (39.598,96.002,95.565)
C5: (39.974,94.931,94.856)
O3': (37.433,100.305,95.503)
OP1: (34.031,96.670,96.212)
OP2: (35.434,95.036,94.804)
C4: (41.318,94.883,94.396)
O5': (36.529,96.751,96.255)
C3': (38.136,99.105,95.774)
C1': (40.082,98.153,96.681)
O4': (38.985,97.756,97.493)
C5': (36.563,97.759,97.282)
P: (35.247,95.834,96.046)
O2: (42.560,97.904,95.589)
C4': (37.827,98.574,97.167)
C2': (39.629,99.360,95.860)
O2': (39.883,100.538,96.598)
N1: (40.479,97.009,95.844)
N3: (42.182,95.876,94.636)
N4: (41.750,93.820,93.707)
C6: (39.598,96.002,95.565)
C5: (39.974,94.931,94.856)
O3': (37.433,100.305,95.503)
OP1: (36.649,102.120,94.019)
OP2: (36.308,99.670,93.371)
C3': (40.679,101.247,91.285)
C1': (41.790,99.310,92.079)
C5': (39.590,101.688,93.543)
O4': (41.321,100.037,93.206)
C8: (39.603,98.033,92.210)
O2': (43.049,100.827,90.739)
C6: (40.273,94.810,91.029)
C5: (40.166,96.126,91.478)
C4: (41.307,96.895,91.445)
P: (37.142,100.727,93.986)
C4': (40.854,101.347,92.791)
C2': (41.767,100.257,90.876)
C2: (42.499,95.245,90.633)
N1: (41.483,94.387,90.609)
N3: (42.520,96.510,91.027)
N6: (39.242,93.961,90.987)
N7: (39.095,96.855,91.964)
N9: (40.939,98.130,91.918)
O5': (38.578,100.680,93.287)
O3': (40.878,102.540,90.740)
OP2: (36.308,99.670,93.371)
C3': (40.679,101.247,91.285)
C1': (41.790,99.310,92.079)
C5': (39.590,101.688,93.543)
O4': (41.321,100.037,93.206)
C8: (39.603,98.033,92.210)
O2': (43.049,100.827,90.739)
C6: (40.273,94.810,91.029)
C5: (40.166,96.126,91.478)
C4: (41.307,96.895,91.445)
P: (37.142,100.727,93.986)
C4': (40.854,101.347,92.791)
C2': (41.767,100.257,90.876)
C2: (42.499,95.245,90.633)
N1: (41.483,94.387,90.609)
N3: (42.520,96.510,91.027)
N6: (39.242,93.961,90.987)
N7: (39.095,96.855,91.964)
N9: (40.939,98.130,91.918)
O5': (38.578,100.680,93.287)
O3': (40.878,102.540,90.740)
Image (generated by PyMOL):