Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1390:A1389
Extra
PDB:
ATOM 1 O3' A A1389 15.821 -14.431 -2.461 1.00 63.90 O
ATOM 2 P G A1390 15.050 -15.649 -1.777 1.00 75.71 P
ATOM 3 OP1 G A1390 14.888 -15.334 -0.335 1.00 73.23 O
ATOM 4 OP2 G A1390 15.719 -16.915 -2.191 1.00 68.28 O
ATOM 5 O5' G A1390 13.623 -15.584 -2.471 1.00 70.55 O
ATOM 6 C5' G A1390 12.884 -14.370 -2.466 1.00 66.93 C
ATOM 7 C4' G A1390 11.842 -14.401 -3.546 1.00 65.83 C
ATOM 8 O4' G A1390 12.477 -14.380 -4.849 1.00 66.75 O
ATOM 9 C3' G A1390 11.022 -15.666 -3.525 1.00 69.19 C
ATOM 10 O3' G A1390 9.971 -15.565 -2.575 1.00 75.71 O
ATOM 11 C2' G A1390 10.581 -15.817 -4.976 1.00 69.10 C
ATOM 12 O2' G A1390 9.414 -15.094 -5.290 1.00 72.22 O
ATOM 13 C1' G A1390 11.788 -15.247 -5.731 1.00 69.25 C
ATOM 14 N9 G A1390 12.725 -16.290 -6.140 1.00 73.77 N
ATOM 15 C8 G A1390 13.778 -16.777 -5.398 1.00 75.22 C
ATOM 16 N7 G A1390 14.427 -17.735 -5.998 1.00 76.07 N
ATOM 17 C5 G A1390 13.776 -17.889 -7.214 1.00 74.73 C
ATOM 18 C6 G A1390 14.031 -18.782 -8.276 1.00 75.21 C
ATOM 19 O6 G A1390 14.915 -19.641 -8.358 1.00 73.60 O
ATOM 20 N1 G A1390 13.131 -18.610 -9.322 1.00 78.50 N
ATOM 21 C2 G A1390 12.110 -17.695 -9.344 1.00 75.97 C
ATOM 22 N2 G A1390 11.339 -17.695 -10.453 1.00 74.63 N
ATOM 23 N3 G A1390 11.860 -16.845 -8.354 1.00 74.22 N
ATOM 24 C4 G A1390 12.726 -17.000 -7.325 1.00 74.98 C
ATOM 25 P G A1391 9.334 -16.902 -1.960 1.00 84.90 P
ATOM 26 OP1 G A1391 8.512 -16.559 -0.772 1.00 79.96 O
ATOM 27 OP2 G A1391 10.419 -17.916 -1.827 1.00 68.95 O
ATOM 28 O5' G A1391 8.357 -17.356 -3.127 1.00 72.49 O
TER
ATOM 1 O3' U B1388 21.279 -15.572 -3.720 1.00 56.53 O
ATOM 2 P A B1389 20.312 -16.755 -3.246 1.00 58.84 P
ATOM 3 OP1 A B1389 20.784 -17.188 -1.909 1.00 50.08 O
ATOM 4 OP2 A B1389 20.210 -17.750 -4.359 1.00 58.05 O
ATOM 5 O5' A B1389 18.923 -15.994 -3.103 1.00 62.21 O
ATOM 6 C5' A B1389 18.907 -14.597 -2.841 1.00 65.24 C
ATOM 7 C4' A B1389 17.835 -13.924 -3.654 1.00 65.77 C
ATOM 8 O4' A B1389 18.197 -13.827 -5.056 1.00 60.62 O
ATOM 9 C3' A B1389 16.518 -14.656 -3.662 1.00 66.05 C
ATOM 10 O3' A B1389 15.821 -14.431 -2.461 1.00 63.90 O
ATOM 11 C2' A B1389 15.836 -14.110 -4.905 1.00 66.59 C
ATOM 12 O2' A B1389 15.207 -12.870 -4.679 1.00 72.18 O
ATOM 13 C1' A B1389 17.026 -13.926 -5.847 1.00 63.18 C
ATOM 14 N9 A B1389 17.171 -15.063 -6.750 1.00 65.58 N
ATOM 15 C8 A B1389 18.119 -16.063 -6.746 1.00 66.05 C
ATOM 16 N7 A B1389 17.976 -16.929 -7.720 1.00 69.22 N
ATOM 17 C5 A B1389 16.861 -16.470 -8.407 1.00 70.31 C
ATOM 18 C6 A B1389 16.206 -16.944 -9.538 1.00 71.57 C
ATOM 19 N6 A B1389 16.614 -18.006 -10.214 1.00 77.23 N
ATOM 20 N1 A B1389 15.108 -16.281 -9.961 1.00 72.30 N
ATOM 21 C2 A B1389 14.710 -15.198 -9.277 1.00 77.66 C
ATOM 22 N3 A B1389 15.255 -14.641 -8.199 1.00 77.74 N
ATOM 23 C4 A B1389 16.345 -15.334 -7.812 1.00 72.85 C
ATOM 24 P G B1390 15.050 -15.649 -1.777 1.00 75.71 P
ATOM 25 OP1 G B1390 14.888 -15.334 -0.335 1.00 73.23 O
ATOM 26 OP2 G B1390 15.719 -16.915 -2.191 1.00 68.28 O
ATOM 27 O5' G B1390 13.623 -15.584 -2.471 1.00 70.55 O
TER
ATOM 2 P G A1390 15.050 -15.649 -1.777 1.00 75.71 P
ATOM 3 OP1 G A1390 14.888 -15.334 -0.335 1.00 73.23 O
ATOM 4 OP2 G A1390 15.719 -16.915 -2.191 1.00 68.28 O
ATOM 5 O5' G A1390 13.623 -15.584 -2.471 1.00 70.55 O
ATOM 6 C5' G A1390 12.884 -14.370 -2.466 1.00 66.93 C
ATOM 7 C4' G A1390 11.842 -14.401 -3.546 1.00 65.83 C
ATOM 8 O4' G A1390 12.477 -14.380 -4.849 1.00 66.75 O
ATOM 9 C3' G A1390 11.022 -15.666 -3.525 1.00 69.19 C
ATOM 10 O3' G A1390 9.971 -15.565 -2.575 1.00 75.71 O
ATOM 11 C2' G A1390 10.581 -15.817 -4.976 1.00 69.10 C
ATOM 12 O2' G A1390 9.414 -15.094 -5.290 1.00 72.22 O
ATOM 13 C1' G A1390 11.788 -15.247 -5.731 1.00 69.25 C
ATOM 14 N9 G A1390 12.725 -16.290 -6.140 1.00 73.77 N
ATOM 15 C8 G A1390 13.778 -16.777 -5.398 1.00 75.22 C
ATOM 16 N7 G A1390 14.427 -17.735 -5.998 1.00 76.07 N
ATOM 17 C5 G A1390 13.776 -17.889 -7.214 1.00 74.73 C
ATOM 18 C6 G A1390 14.031 -18.782 -8.276 1.00 75.21 C
ATOM 19 O6 G A1390 14.915 -19.641 -8.358 1.00 73.60 O
ATOM 20 N1 G A1390 13.131 -18.610 -9.322 1.00 78.50 N
ATOM 21 C2 G A1390 12.110 -17.695 -9.344 1.00 75.97 C
ATOM 22 N2 G A1390 11.339 -17.695 -10.453 1.00 74.63 N
ATOM 23 N3 G A1390 11.860 -16.845 -8.354 1.00 74.22 N
ATOM 24 C4 G A1390 12.726 -17.000 -7.325 1.00 74.98 C
ATOM 25 P G A1391 9.334 -16.902 -1.960 1.00 84.90 P
ATOM 26 OP1 G A1391 8.512 -16.559 -0.772 1.00 79.96 O
ATOM 27 OP2 G A1391 10.419 -17.916 -1.827 1.00 68.95 O
ATOM 28 O5' G A1391 8.357 -17.356 -3.127 1.00 72.49 O
TER
ATOM 1 O3' U B1388 21.279 -15.572 -3.720 1.00 56.53 O
ATOM 2 P A B1389 20.312 -16.755 -3.246 1.00 58.84 P
ATOM 3 OP1 A B1389 20.784 -17.188 -1.909 1.00 50.08 O
ATOM 4 OP2 A B1389 20.210 -17.750 -4.359 1.00 58.05 O
ATOM 5 O5' A B1389 18.923 -15.994 -3.103 1.00 62.21 O
ATOM 6 C5' A B1389 18.907 -14.597 -2.841 1.00 65.24 C
ATOM 7 C4' A B1389 17.835 -13.924 -3.654 1.00 65.77 C
ATOM 8 O4' A B1389 18.197 -13.827 -5.056 1.00 60.62 O
ATOM 9 C3' A B1389 16.518 -14.656 -3.662 1.00 66.05 C
ATOM 10 O3' A B1389 15.821 -14.431 -2.461 1.00 63.90 O
ATOM 11 C2' A B1389 15.836 -14.110 -4.905 1.00 66.59 C
ATOM 12 O2' A B1389 15.207 -12.870 -4.679 1.00 72.18 O
ATOM 13 C1' A B1389 17.026 -13.926 -5.847 1.00 63.18 C
ATOM 14 N9 A B1389 17.171 -15.063 -6.750 1.00 65.58 N
ATOM 15 C8 A B1389 18.119 -16.063 -6.746 1.00 66.05 C
ATOM 16 N7 A B1389 17.976 -16.929 -7.720 1.00 69.22 N
ATOM 17 C5 A B1389 16.861 -16.470 -8.407 1.00 70.31 C
ATOM 18 C6 A B1389 16.206 -16.944 -9.538 1.00 71.57 C
ATOM 19 N6 A B1389 16.614 -18.006 -10.214 1.00 77.23 N
ATOM 20 N1 A B1389 15.108 -16.281 -9.961 1.00 72.30 N
ATOM 21 C2 A B1389 14.710 -15.198 -9.277 1.00 77.66 C
ATOM 22 N3 A B1389 15.255 -14.641 -8.199 1.00 77.74 N
ATOM 23 C4 A B1389 16.345 -15.334 -7.812 1.00 72.85 C
ATOM 24 P G B1390 15.050 -15.649 -1.777 1.00 75.71 P
ATOM 25 OP1 G B1390 14.888 -15.334 -0.335 1.00 73.23 O
ATOM 26 OP2 G B1390 15.719 -16.915 -2.191 1.00 68.28 O
ATOM 27 O5' G B1390 13.623 -15.584 -2.471 1.00 70.55 O
TER
Atoms:
OP1: (14.888,-15.334,-0.335)
OP2: (15.719,-16.915,-2.191)
C3': (11.022,-15.666,-3.525)
C1': (11.788,-15.247,-5.731)
C5': (12.884,-14.370,-2.466)
O6: (14.915,-19.641,-8.358)
O4': (12.477,-14.380,-4.849)
C8: (13.778,-16.777,-5.398)
C2: (12.110,-17.695,-9.344)
C6: (14.031,-18.782,-8.276)
C5: (13.776,-17.889,-7.214)
C4: (12.726,-17.000,-7.325)
P: (15.050,-15.649,-1.777)
C4': (11.842,-14.401,-3.546)
C2': (10.581,-15.817,-4.976)
O2': (9.414,-15.094,-5.290)
N1: (13.131,-18.610,-9.322)
N2: (11.339,-17.695,-10.453)
N3: (11.860,-16.845,-8.354)
N7: (14.427,-17.735,-5.998)
N9: (12.725,-16.290,-6.140)
O5': (13.623,-15.584,-2.471)
O3': (9.971,-15.565,-2.575)
OP2: (15.719,-16.915,-2.191)
C3': (11.022,-15.666,-3.525)
C1': (11.788,-15.247,-5.731)
C5': (12.884,-14.370,-2.466)
O6: (14.915,-19.641,-8.358)
O4': (12.477,-14.380,-4.849)
C8: (13.778,-16.777,-5.398)
C2: (12.110,-17.695,-9.344)
C6: (14.031,-18.782,-8.276)
C5: (13.776,-17.889,-7.214)
C4: (12.726,-17.000,-7.325)
P: (15.050,-15.649,-1.777)
C4': (11.842,-14.401,-3.546)
C2': (10.581,-15.817,-4.976)
O2': (9.414,-15.094,-5.290)
N1: (13.131,-18.610,-9.322)
N2: (11.339,-17.695,-10.453)
N3: (11.860,-16.845,-8.354)
N7: (14.427,-17.735,-5.998)
N9: (12.725,-16.290,-6.140)
O5': (13.623,-15.584,-2.471)
O3': (9.971,-15.565,-2.575)
OP1: (20.784,-17.188,-1.909)
OP2: (20.210,-17.750,-4.359)
C3': (16.518,-14.656,-3.662)
C1': (17.026,-13.926,-5.847)
C5': (18.907,-14.597,-2.841)
O4': (18.197,-13.827,-5.056)
C8: (18.119,-16.063,-6.746)
O2': (15.207,-12.870,-4.679)
C6: (16.206,-16.944,-9.538)
C5: (16.861,-16.470,-8.407)
C4: (16.345,-15.334,-7.812)
P: (20.312,-16.755,-3.246)
C4': (17.835,-13.924,-3.654)
C2': (15.836,-14.110,-4.905)
C2: (14.710,-15.198,-9.277)
N1: (15.108,-16.281,-9.961)
N3: (15.255,-14.641,-8.199)
N6: (16.614,-18.006,-10.214)
N7: (17.976,-16.929,-7.720)
N9: (17.171,-15.063,-6.750)
O5': (18.923,-15.994,-3.103)
O3': (15.821,-14.431,-2.461)
OP2: (20.210,-17.750,-4.359)
C3': (16.518,-14.656,-3.662)
C1': (17.026,-13.926,-5.847)
C5': (18.907,-14.597,-2.841)
O4': (18.197,-13.827,-5.056)
C8: (18.119,-16.063,-6.746)
O2': (15.207,-12.870,-4.679)
C6: (16.206,-16.944,-9.538)
C5: (16.861,-16.470,-8.407)
C4: (16.345,-15.334,-7.812)
P: (20.312,-16.755,-3.246)
C4': (17.835,-13.924,-3.654)
C2': (15.836,-14.110,-4.905)
C2: (14.710,-15.198,-9.277)
N1: (15.108,-16.281,-9.961)
N3: (15.255,-14.641,-8.199)
N6: (16.614,-18.006,-10.214)
N7: (17.976,-16.929,-7.720)
N9: (17.171,-15.063,-6.750)
O5': (18.923,-15.994,-3.103)
O3': (15.821,-14.431,-2.461)
Image (generated by PyMOL):