Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0242:0243
Extra
PDB:
ATOM 1 O3' U A 241 80.056 143.935 0.196 1.00 74.50 O
ATOM 2 P C A 242 78.521 143.772 -0.260 1.00 76.17 P
ATOM 3 OP1 C A 242 77.928 145.127 -0.344 1.00 76.76 O
ATOM 4 OP2 C A 242 77.885 142.744 0.607 1.00 75.91 O
ATOM 5 O5' C A 242 78.614 143.185 -1.738 1.00 77.90 O
ATOM 6 C5' C A 242 77.436 142.745 -2.436 1.00 81.23 C
ATOM 7 C4' C A 242 77.463 143.230 -3.868 1.00 84.16 C
ATOM 8 O4' C A 242 77.365 144.679 -3.900 1.00 85.43 O
ATOM 9 C3' C A 242 78.740 142.939 -4.635 1.00 84.89 C
ATOM 10 O3' C A 242 78.770 141.617 -5.145 1.00 86.34 O
ATOM 11 C2' C A 242 78.702 143.982 -5.741 1.00 84.93 C
ATOM 12 O2' C A 242 77.858 143.614 -6.811 1.00 84.35 O
ATOM 13 C1' C A 242 78.115 145.186 -4.997 1.00 85.75 C
ATOM 14 N1 C A 242 79.143 146.119 -4.483 1.00 86.86 N
ATOM 15 C2 C A 242 79.959 146.808 -5.403 1.00 88.17 C
ATOM 16 O2 C A 242 79.787 146.627 -6.622 1.00 89.19 O
ATOM 17 N3 C A 242 80.914 147.650 -4.938 1.00 88.30 N
ATOM 18 C4 C A 242 81.071 147.822 -3.624 1.00 87.23 C
ATOM 19 N4 C A 242 82.032 148.654 -3.213 1.00 85.56 N
ATOM 20 C5 C A 242 80.252 147.146 -2.671 1.00 87.38 C
ATOM 21 C6 C A 242 79.311 146.314 -3.140 1.00 86.78 C
ATOM 22 P A A 243 80.158 140.813 -5.162 1.00 87.68 P
ATOM 23 OP1 A A 243 79.903 139.476 -5.766 1.00 87.70 O
ATOM 24 OP2 A A 243 80.734 140.905 -3.794 1.00 87.20 O
ATOM 25 O5' A A 243 81.080 141.659 -6.153 1.00 87.45 O
TER
ATOM 1 O3' C B 242 78.770 141.617 -5.145 1.00 86.34 O
ATOM 2 P A B 243 80.158 140.813 -5.162 1.00 87.68 P
ATOM 3 OP1 A B 243 79.903 139.476 -5.766 1.00 87.70 O
ATOM 4 OP2 A B 243 80.734 140.905 -3.794 1.00 87.20 O
ATOM 5 O5' A B 243 81.080 141.659 -6.153 1.00 87.45 O
ATOM 6 C5' A B 243 80.733 141.822 -7.551 1.00 86.43 C
ATOM 7 C4' A B 243 81.605 142.883 -8.194 1.00 85.03 C
ATOM 8 O4' A B 243 81.409 144.147 -7.506 1.00 84.53 O
ATOM 9 C3' A B 243 83.106 142.650 -8.120 1.00 84.52 C
ATOM 10 O3' A B 243 83.557 141.803 -9.173 1.00 84.66 O
ATOM 11 C2' A B 243 83.663 144.060 -8.257 1.00 83.99 C
ATOM 12 O2' A B 243 83.667 144.503 -9.596 1.00 83.69 O
ATOM 13 C1' A B 243 82.629 144.871 -7.475 1.00 84.10 C
ATOM 14 N9 A B 243 82.997 145.116 -6.077 1.00 84.34 N
ATOM 15 C8 A B 243 82.566 144.455 -4.951 1.00 84.60 C
ATOM 16 N7 A B 243 83.074 144.923 -3.837 1.00 84.00 N
ATOM 17 C5 A B 243 83.897 145.959 -4.254 1.00 84.17 C
ATOM 18 C6 A B 243 84.729 146.851 -3.550 1.00 84.41 C
ATOM 19 N6 A B 243 84.874 146.844 -2.223 1.00 84.21 N
ATOM 20 N1 A B 243 85.421 147.761 -4.266 1.00 84.33 N
ATOM 21 C2 A B 243 85.284 147.766 -5.596 1.00 84.76 C
ATOM 22 N3 A B 243 84.538 146.980 -6.371 1.00 84.95 N
ATOM 23 C4 A B 243 83.861 146.088 -5.630 1.00 84.33 C
ATOM 24 P C B 244 84.937 140.992 -9.012 1.00 86.01 P
ATOM 25 OP1 C B 244 85.230 140.344 -10.316 1.00 85.16 O
ATOM 26 OP2 C B 244 84.854 140.160 -7.783 1.00 86.71 O
ATOM 27 O5' C B 244 86.034 142.120 -8.755 1.00 84.38 O
TER
ATOM 2 P C A 242 78.521 143.772 -0.260 1.00 76.17 P
ATOM 3 OP1 C A 242 77.928 145.127 -0.344 1.00 76.76 O
ATOM 4 OP2 C A 242 77.885 142.744 0.607 1.00 75.91 O
ATOM 5 O5' C A 242 78.614 143.185 -1.738 1.00 77.90 O
ATOM 6 C5' C A 242 77.436 142.745 -2.436 1.00 81.23 C
ATOM 7 C4' C A 242 77.463 143.230 -3.868 1.00 84.16 C
ATOM 8 O4' C A 242 77.365 144.679 -3.900 1.00 85.43 O
ATOM 9 C3' C A 242 78.740 142.939 -4.635 1.00 84.89 C
ATOM 10 O3' C A 242 78.770 141.617 -5.145 1.00 86.34 O
ATOM 11 C2' C A 242 78.702 143.982 -5.741 1.00 84.93 C
ATOM 12 O2' C A 242 77.858 143.614 -6.811 1.00 84.35 O
ATOM 13 C1' C A 242 78.115 145.186 -4.997 1.00 85.75 C
ATOM 14 N1 C A 242 79.143 146.119 -4.483 1.00 86.86 N
ATOM 15 C2 C A 242 79.959 146.808 -5.403 1.00 88.17 C
ATOM 16 O2 C A 242 79.787 146.627 -6.622 1.00 89.19 O
ATOM 17 N3 C A 242 80.914 147.650 -4.938 1.00 88.30 N
ATOM 18 C4 C A 242 81.071 147.822 -3.624 1.00 87.23 C
ATOM 19 N4 C A 242 82.032 148.654 -3.213 1.00 85.56 N
ATOM 20 C5 C A 242 80.252 147.146 -2.671 1.00 87.38 C
ATOM 21 C6 C A 242 79.311 146.314 -3.140 1.00 86.78 C
ATOM 22 P A A 243 80.158 140.813 -5.162 1.00 87.68 P
ATOM 23 OP1 A A 243 79.903 139.476 -5.766 1.00 87.70 O
ATOM 24 OP2 A A 243 80.734 140.905 -3.794 1.00 87.20 O
ATOM 25 O5' A A 243 81.080 141.659 -6.153 1.00 87.45 O
TER
ATOM 1 O3' C B 242 78.770 141.617 -5.145 1.00 86.34 O
ATOM 2 P A B 243 80.158 140.813 -5.162 1.00 87.68 P
ATOM 3 OP1 A B 243 79.903 139.476 -5.766 1.00 87.70 O
ATOM 4 OP2 A B 243 80.734 140.905 -3.794 1.00 87.20 O
ATOM 5 O5' A B 243 81.080 141.659 -6.153 1.00 87.45 O
ATOM 6 C5' A B 243 80.733 141.822 -7.551 1.00 86.43 C
ATOM 7 C4' A B 243 81.605 142.883 -8.194 1.00 85.03 C
ATOM 8 O4' A B 243 81.409 144.147 -7.506 1.00 84.53 O
ATOM 9 C3' A B 243 83.106 142.650 -8.120 1.00 84.52 C
ATOM 10 O3' A B 243 83.557 141.803 -9.173 1.00 84.66 O
ATOM 11 C2' A B 243 83.663 144.060 -8.257 1.00 83.99 C
ATOM 12 O2' A B 243 83.667 144.503 -9.596 1.00 83.69 O
ATOM 13 C1' A B 243 82.629 144.871 -7.475 1.00 84.10 C
ATOM 14 N9 A B 243 82.997 145.116 -6.077 1.00 84.34 N
ATOM 15 C8 A B 243 82.566 144.455 -4.951 1.00 84.60 C
ATOM 16 N7 A B 243 83.074 144.923 -3.837 1.00 84.00 N
ATOM 17 C5 A B 243 83.897 145.959 -4.254 1.00 84.17 C
ATOM 18 C6 A B 243 84.729 146.851 -3.550 1.00 84.41 C
ATOM 19 N6 A B 243 84.874 146.844 -2.223 1.00 84.21 N
ATOM 20 N1 A B 243 85.421 147.761 -4.266 1.00 84.33 N
ATOM 21 C2 A B 243 85.284 147.766 -5.596 1.00 84.76 C
ATOM 22 N3 A B 243 84.538 146.980 -6.371 1.00 84.95 N
ATOM 23 C4 A B 243 83.861 146.088 -5.630 1.00 84.33 C
ATOM 24 P C B 244 84.937 140.992 -9.012 1.00 86.01 P
ATOM 25 OP1 C B 244 85.230 140.344 -10.316 1.00 85.16 O
ATOM 26 OP2 C B 244 84.854 140.160 -7.783 1.00 86.71 O
ATOM 27 O5' C B 244 86.034 142.120 -8.755 1.00 84.38 O
TER
Atoms:
C2: (79.959,146.808,-5.403)
OP1: (77.928,145.127,-0.344)
OP2: (77.885,142.744,0.607)
C4: (81.071,147.822,-3.624)
O5': (78.614,143.185,-1.738)
C3': (78.740,142.939,-4.635)
C1': (78.115,145.186,-4.997)
O4': (77.365,144.679,-3.900)
C5': (77.436,142.745,-2.436)
P: (78.521,143.772,-0.260)
O2: (79.787,146.627,-6.622)
C4': (77.463,143.230,-3.868)
C2': (78.702,143.982,-5.741)
O2': (77.858,143.614,-6.811)
N1: (79.143,146.119,-4.483)
N3: (80.914,147.650,-4.938)
N4: (82.032,148.654,-3.213)
C6: (79.311,146.314,-3.140)
C5: (80.252,147.146,-2.671)
O3': (78.770,141.617,-5.145)
OP1: (77.928,145.127,-0.344)
OP2: (77.885,142.744,0.607)
C4: (81.071,147.822,-3.624)
O5': (78.614,143.185,-1.738)
C3': (78.740,142.939,-4.635)
C1': (78.115,145.186,-4.997)
O4': (77.365,144.679,-3.900)
C5': (77.436,142.745,-2.436)
P: (78.521,143.772,-0.260)
O2: (79.787,146.627,-6.622)
C4': (77.463,143.230,-3.868)
C2': (78.702,143.982,-5.741)
O2': (77.858,143.614,-6.811)
N1: (79.143,146.119,-4.483)
N3: (80.914,147.650,-4.938)
N4: (82.032,148.654,-3.213)
C6: (79.311,146.314,-3.140)
C5: (80.252,147.146,-2.671)
O3': (78.770,141.617,-5.145)
OP1: (79.903,139.476,-5.766)
OP2: (80.734,140.905,-3.794)
C3': (83.106,142.650,-8.120)
C1': (82.629,144.871,-7.475)
C5': (80.733,141.822,-7.551)
O4': (81.409,144.147,-7.506)
C8: (82.566,144.455,-4.951)
O2': (83.667,144.503,-9.596)
C6: (84.729,146.851,-3.550)
C5: (83.897,145.959,-4.254)
C4: (83.861,146.088,-5.630)
P: (80.158,140.813,-5.162)
C4': (81.605,142.883,-8.194)
C2': (83.663,144.060,-8.257)
C2: (85.284,147.766,-5.596)
N1: (85.421,147.761,-4.266)
N3: (84.538,146.980,-6.371)
N6: (84.874,146.844,-2.223)
N7: (83.074,144.923,-3.837)
N9: (82.997,145.116,-6.077)
O5': (81.080,141.659,-6.153)
O3': (83.557,141.803,-9.173)
OP2: (80.734,140.905,-3.794)
C3': (83.106,142.650,-8.120)
C1': (82.629,144.871,-7.475)
C5': (80.733,141.822,-7.551)
O4': (81.409,144.147,-7.506)
C8: (82.566,144.455,-4.951)
O2': (83.667,144.503,-9.596)
C6: (84.729,146.851,-3.550)
C5: (83.897,145.959,-4.254)
C4: (83.861,146.088,-5.630)
P: (80.158,140.813,-5.162)
C4': (81.605,142.883,-8.194)
C2': (83.663,144.060,-8.257)
C2: (85.284,147.766,-5.596)
N1: (85.421,147.761,-4.266)
N3: (84.538,146.980,-6.371)
N6: (84.874,146.844,-2.223)
N7: (83.074,144.923,-3.837)
N9: (82.997,145.116,-6.077)
O5': (81.080,141.659,-6.153)
O3': (83.557,141.803,-9.173)
Image (generated by PyMOL):