Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW4:A24:A23
Extra
PDB:
ATOM 1 O3' A A 23 -6.928 13.865 3.640 1.00 15.58 O
ATOM 2 P G A 24 -7.476 15.368 3.649 1.00 18.28 P
ATOM 3 OP1 G A 24 -8.711 15.385 4.462 1.00 19.44 O
ATOM 4 OP2 G A 24 -7.498 15.862 2.257 1.00 20.10 O
ATOM 5 O5' G A 24 -6.320 16.185 4.397 1.00 18.91 O
ATOM 6 C5' G A 24 -6.372 16.448 5.790 1.00 18.13 C
ATOM 7 C4' G A 24 -5.017 16.887 6.322 1.00 15.57 C
ATOM 8 O4' G A 24 -3.961 16.384 5.466 1.00 14.20 O
ATOM 9 C3' G A 24 -4.712 18.377 6.359 1.00 13.91 C
ATOM 10 O3' G A 24 -5.396 18.995 7.440 1.00 13.47 O
ATOM 11 C2' G A 24 -3.219 18.286 6.642 1.00 13.30 C
ATOM 12 O2' G A 24 -2.991 17.881 7.977 1.00 13.46 O
ATOM 13 C1' G A 24 -2.803 17.169 5.689 1.00 13.20 C
ATOM 14 N9 G A 24 -2.275 17.643 4.412 1.00 12.16 N
ATOM 15 C8 G A 24 -2.850 17.538 3.168 1.00 12.39 C
ATOM 16 N7 G A 24 -2.126 18.063 2.217 1.00 12.36 N
ATOM 17 C5 G A 24 -0.999 18.543 2.872 1.00 11.79 C
ATOM 18 C6 G A 24 0.139 19.209 2.362 1.00 10.81 C
ATOM 19 O6 G A 24 0.387 19.519 1.189 1.00 11.34 O
ATOM 20 N1 G A 24 1.044 19.521 3.375 1.00 10.51 N
ATOM 21 C2 G A 24 0.872 19.229 4.708 1.00 10.34 C
ATOM 22 N2 G A 24 1.855 19.617 5.533 1.00 10.67 N
ATOM 23 N3 G A 24 -0.190 18.603 5.198 1.00 10.87 N
ATOM 24 C4 G A 24 -1.078 18.292 4.223 1.00 11.25 C
ATOM 25 P U A 25 -5.842 20.532 7.377 1.00 13.68 P
ATOM 26 OP1 U A 25 -6.643 20.806 8.590 1.00 14.55 O
ATOM 27 OP2 U A 25 -6.416 20.787 6.039 1.00 15.48 O
ATOM 28 O5' U A 25 -4.470 21.338 7.468 1.00 12.41 O
TER
ATOM 1 O3' G B 22 -5.421 10.995 -1.583 1.00 12.86 O
ATOM 2 P A B 23 -6.283 12.312 -1.322 1.00 15.12 P
ATOM 3 OP1 A B 23 -7.708 11.917 -1.394 1.00 16.02 O
ATOM 4 OP2 A B 23 -5.772 13.386 -2.201 1.00 16.55 O
ATOM 5 O5' A B 23 -5.923 12.694 0.186 1.00 13.69 O
ATOM 6 C5' A B 23 -6.378 11.843 1.226 1.00 12.50 C
ATOM 7 C4' A B 23 -5.659 12.128 2.530 1.00 11.55 C
ATOM 8 O4' A B 23 -4.244 11.853 2.383 1.00 10.26 O
ATOM 9 C3' A B 23 -5.692 13.571 3.005 1.00 12.68 C
ATOM 10 O3' A B 23 -6.928 13.865 3.640 1.00 15.58 O
ATOM 11 C2' A B 23 -4.552 13.537 4.010 1.00 11.54 C
ATOM 12 O2' A B 23 -4.904 12.839 5.187 1.00 11.83 O
ATOM 13 C1' A B 23 -3.521 12.732 3.228 1.00 10.51 C
ATOM 14 N9 A B 23 -2.628 13.557 2.419 1.00 10.00 N
ATOM 15 C8 A B 23 -2.710 13.836 1.082 1.00 10.37 C
ATOM 16 N7 A B 23 -1.745 14.612 0.643 1.00 10.12 N
ATOM 17 C5 A B 23 -0.974 14.862 1.768 1.00 9.34 C
ATOM 18 C6 A B 23 0.198 15.616 1.977 1.00 9.31 C
ATOM 19 N6 A B 23 0.835 16.291 1.014 1.00 9.80 N
ATOM 20 N1 A B 23 0.696 15.653 3.230 1.00 9.02 N
ATOM 21 C2 A B 23 0.067 14.978 4.199 1.00 9.10 C
ATOM 22 N3 A B 23 -1.035 14.235 4.121 1.00 9.58 N
ATOM 23 C4 A B 23 -1.509 14.218 2.868 1.00 9.47 C
ATOM 24 P G B 24 -7.476 15.368 3.649 1.00 18.28 P
ATOM 25 OP1 G B 24 -8.711 15.385 4.462 1.00 19.44 O
ATOM 26 OP2 G B 24 -7.498 15.862 2.257 1.00 20.10 O
ATOM 27 O5' G B 24 -6.320 16.185 4.397 1.00 18.91 O
TER
ATOM 2 P G A 24 -7.476 15.368 3.649 1.00 18.28 P
ATOM 3 OP1 G A 24 -8.711 15.385 4.462 1.00 19.44 O
ATOM 4 OP2 G A 24 -7.498 15.862 2.257 1.00 20.10 O
ATOM 5 O5' G A 24 -6.320 16.185 4.397 1.00 18.91 O
ATOM 6 C5' G A 24 -6.372 16.448 5.790 1.00 18.13 C
ATOM 7 C4' G A 24 -5.017 16.887 6.322 1.00 15.57 C
ATOM 8 O4' G A 24 -3.961 16.384 5.466 1.00 14.20 O
ATOM 9 C3' G A 24 -4.712 18.377 6.359 1.00 13.91 C
ATOM 10 O3' G A 24 -5.396 18.995 7.440 1.00 13.47 O
ATOM 11 C2' G A 24 -3.219 18.286 6.642 1.00 13.30 C
ATOM 12 O2' G A 24 -2.991 17.881 7.977 1.00 13.46 O
ATOM 13 C1' G A 24 -2.803 17.169 5.689 1.00 13.20 C
ATOM 14 N9 G A 24 -2.275 17.643 4.412 1.00 12.16 N
ATOM 15 C8 G A 24 -2.850 17.538 3.168 1.00 12.39 C
ATOM 16 N7 G A 24 -2.126 18.063 2.217 1.00 12.36 N
ATOM 17 C5 G A 24 -0.999 18.543 2.872 1.00 11.79 C
ATOM 18 C6 G A 24 0.139 19.209 2.362 1.00 10.81 C
ATOM 19 O6 G A 24 0.387 19.519 1.189 1.00 11.34 O
ATOM 20 N1 G A 24 1.044 19.521 3.375 1.00 10.51 N
ATOM 21 C2 G A 24 0.872 19.229 4.708 1.00 10.34 C
ATOM 22 N2 G A 24 1.855 19.617 5.533 1.00 10.67 N
ATOM 23 N3 G A 24 -0.190 18.603 5.198 1.00 10.87 N
ATOM 24 C4 G A 24 -1.078 18.292 4.223 1.00 11.25 C
ATOM 25 P U A 25 -5.842 20.532 7.377 1.00 13.68 P
ATOM 26 OP1 U A 25 -6.643 20.806 8.590 1.00 14.55 O
ATOM 27 OP2 U A 25 -6.416 20.787 6.039 1.00 15.48 O
ATOM 28 O5' U A 25 -4.470 21.338 7.468 1.00 12.41 O
TER
ATOM 1 O3' G B 22 -5.421 10.995 -1.583 1.00 12.86 O
ATOM 2 P A B 23 -6.283 12.312 -1.322 1.00 15.12 P
ATOM 3 OP1 A B 23 -7.708 11.917 -1.394 1.00 16.02 O
ATOM 4 OP2 A B 23 -5.772 13.386 -2.201 1.00 16.55 O
ATOM 5 O5' A B 23 -5.923 12.694 0.186 1.00 13.69 O
ATOM 6 C5' A B 23 -6.378 11.843 1.226 1.00 12.50 C
ATOM 7 C4' A B 23 -5.659 12.128 2.530 1.00 11.55 C
ATOM 8 O4' A B 23 -4.244 11.853 2.383 1.00 10.26 O
ATOM 9 C3' A B 23 -5.692 13.571 3.005 1.00 12.68 C
ATOM 10 O3' A B 23 -6.928 13.865 3.640 1.00 15.58 O
ATOM 11 C2' A B 23 -4.552 13.537 4.010 1.00 11.54 C
ATOM 12 O2' A B 23 -4.904 12.839 5.187 1.00 11.83 O
ATOM 13 C1' A B 23 -3.521 12.732 3.228 1.00 10.51 C
ATOM 14 N9 A B 23 -2.628 13.557 2.419 1.00 10.00 N
ATOM 15 C8 A B 23 -2.710 13.836 1.082 1.00 10.37 C
ATOM 16 N7 A B 23 -1.745 14.612 0.643 1.00 10.12 N
ATOM 17 C5 A B 23 -0.974 14.862 1.768 1.00 9.34 C
ATOM 18 C6 A B 23 0.198 15.616 1.977 1.00 9.31 C
ATOM 19 N6 A B 23 0.835 16.291 1.014 1.00 9.80 N
ATOM 20 N1 A B 23 0.696 15.653 3.230 1.00 9.02 N
ATOM 21 C2 A B 23 0.067 14.978 4.199 1.00 9.10 C
ATOM 22 N3 A B 23 -1.035 14.235 4.121 1.00 9.58 N
ATOM 23 C4 A B 23 -1.509 14.218 2.868 1.00 9.47 C
ATOM 24 P G B 24 -7.476 15.368 3.649 1.00 18.28 P
ATOM 25 OP1 G B 24 -8.711 15.385 4.462 1.00 19.44 O
ATOM 26 OP2 G B 24 -7.498 15.862 2.257 1.00 20.10 O
ATOM 27 O5' G B 24 -6.320 16.185 4.397 1.00 18.91 O
TER
Atoms:
OP1: (-8.711,15.385,4.462)
OP2: (-7.498,15.862,2.257)
C3': (-4.712,18.377,6.359)
C1': (-2.803,17.169,5.689)
C5': (-6.372,16.448,5.790)
O6: (0.387,19.519,1.189)
O4': (-3.961,16.384,5.466)
C8: (-2.850,17.538,3.168)
C2: (0.872,19.229,4.708)
C6: (0.139,19.209,2.362)
C5: (-0.999,18.543,2.872)
C4: (-1.078,18.292,4.223)
P: (-7.476,15.368,3.649)
C4': (-5.017,16.887,6.322)
C2': (-3.219,18.286,6.642)
O2': (-2.991,17.881,7.977)
N1: (1.044,19.521,3.375)
N2: (1.855,19.617,5.533)
N3: (-0.190,18.603,5.198)
N7: (-2.126,18.063,2.217)
N9: (-2.275,17.643,4.412)
O5': (-6.320,16.185,4.397)
O3': (-5.396,18.995,7.440)
OP2: (-7.498,15.862,2.257)
C3': (-4.712,18.377,6.359)
C1': (-2.803,17.169,5.689)
C5': (-6.372,16.448,5.790)
O6: (0.387,19.519,1.189)
O4': (-3.961,16.384,5.466)
C8: (-2.850,17.538,3.168)
C2: (0.872,19.229,4.708)
C6: (0.139,19.209,2.362)
C5: (-0.999,18.543,2.872)
C4: (-1.078,18.292,4.223)
P: (-7.476,15.368,3.649)
C4': (-5.017,16.887,6.322)
C2': (-3.219,18.286,6.642)
O2': (-2.991,17.881,7.977)
N1: (1.044,19.521,3.375)
N2: (1.855,19.617,5.533)
N3: (-0.190,18.603,5.198)
N7: (-2.126,18.063,2.217)
N9: (-2.275,17.643,4.412)
O5': (-6.320,16.185,4.397)
O3': (-5.396,18.995,7.440)
OP1: (-7.708,11.917,-1.394)
OP2: (-5.772,13.386,-2.201)
C3': (-5.692,13.571,3.005)
C1': (-3.521,12.732,3.228)
C5': (-6.378,11.843,1.226)
O4': (-4.244,11.853,2.383)
C8: (-2.710,13.836,1.082)
O2': (-4.904,12.839,5.187)
C6: (0.198,15.616,1.977)
C5: (-0.974,14.862,1.768)
C4: (-1.509,14.218,2.868)
P: (-6.283,12.312,-1.322)
C4': (-5.659,12.128,2.530)
C2': (-4.552,13.537,4.010)
C2: (0.067,14.978,4.199)
N1: (0.696,15.653,3.230)
N3: (-1.035,14.235,4.121)
N6: (0.835,16.291,1.014)
N7: (-1.745,14.612,0.643)
N9: (-2.628,13.557,2.419)
O5': (-5.923,12.694,0.186)
O3': (-6.928,13.865,3.640)
OP2: (-5.772,13.386,-2.201)
C3': (-5.692,13.571,3.005)
C1': (-3.521,12.732,3.228)
C5': (-6.378,11.843,1.226)
O4': (-4.244,11.853,2.383)
C8: (-2.710,13.836,1.082)
O2': (-4.904,12.839,5.187)
C6: (0.198,15.616,1.977)
C5: (-0.974,14.862,1.768)
C4: (-1.509,14.218,2.868)
P: (-6.283,12.312,-1.322)
C4': (-5.659,12.128,2.530)
C2': (-4.552,13.537,4.010)
C2: (0.067,14.978,4.199)
N1: (0.696,15.653,3.230)
N3: (-1.035,14.235,4.121)
N6: (0.835,16.291,1.014)
N7: (-1.745,14.612,0.643)
N9: (-2.628,13.557,2.419)
O5': (-5.923,12.694,0.186)
O3': (-6.928,13.865,3.640)
Image (generated by PyMOL):