Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3P59:B6:B5
Extra
PDB:
ATOM 1 O3' A A 5 1.405 -24.795 8.700 1.00 37.04 O
ATOM 2 P G A 6 0.383 -24.050 7.730 1.00 33.53 P
ATOM 3 OP1 G A 6 0.803 -22.622 7.647 1.00 32.72 O
ATOM 4 OP2 G A 6 -0.979 -24.362 8.205 1.00 32.20 O
ATOM 5 O5' G A 6 0.652 -24.766 6.341 1.00 50.33 O
ATOM 6 C5' G A 6 1.970 -25.105 5.946 1.00 34.42 C
ATOM 7 C4' G A 6 1.985 -25.964 4.713 1.00 28.68 C
ATOM 8 O4' G A 6 1.502 -27.297 5.028 1.00 30.85 O
ATOM 9 C3' G A 6 1.129 -25.456 3.547 1.00 38.94 C
ATOM 10 O3' G A 6 1.932 -25.267 2.392 1.00 49.23 O
ATOM 11 C2' G A 6 0.129 -26.583 3.287 1.00 37.15 C
ATOM 12 O2' G A 6 -0.182 -26.786 1.920 1.00 35.78 O
ATOM 13 C1' G A 6 0.831 -27.794 3.895 1.00 33.65 C
ATOM 14 N9 G A 6 -0.092 -28.857 4.291 1.00 26.60 N
ATOM 15 C8 G A 6 -1.034 -28.784 5.278 1.00 13.66 C
ATOM 16 N7 G A 6 -1.764 -29.859 5.313 1.00 18.83 N
ATOM 17 C5 G A 6 -1.305 -30.695 4.295 1.00 28.05 C
ATOM 18 C6 G A 6 -1.734 -31.992 3.857 1.00 25.39 C
ATOM 19 O6 G A 6 -2.619 -32.713 4.307 1.00 20.19 O
ATOM 20 N1 G A 6 -1.002 -32.456 2.775 1.00 24.89 N
ATOM 21 C2 G A 6 0.011 -31.757 2.180 1.00 29.45 C
ATOM 22 N2 G A 6 0.599 -32.368 1.139 1.00 35.00 N
ATOM 23 N3 G A 6 0.424 -30.556 2.567 1.00 30.81 N
ATOM 24 C4 G A 6 -0.274 -30.070 3.628 1.00 32.56 C
ATOM 25 P C A 7 2.098 -23.792 1.805 1.00 37.34 P
ATOM 26 OP1 C A 7 2.964 -23.892 0.610 1.00 38.93 O
ATOM 27 OP2 C A 7 2.520 -22.941 2.931 1.00 40.20 O
ATOM 28 O5' C A 7 0.628 -23.410 1.365 1.00 36.11 O
TER
ATOM 1 O3' C B 4 -0.986 -27.311 13.692 1.00 48.62 O
ATOM 2 P A B 5 -1.704 -26.738 12.371 1.00 26.70 P
ATOM 3 OP1 A B 5 -2.048 -25.323 12.638 1.00 30.20 O
ATOM 4 OP2 A B 5 -2.778 -27.666 12.015 1.00 32.94 O
ATOM 5 O5' A B 5 -0.553 -26.805 11.287 1.00 24.07 O
ATOM 6 C5' A B 5 0.672 -26.142 11.504 1.00 28.08 C
ATOM 7 C4' A B 5 1.661 -26.475 10.435 1.00 29.90 C
ATOM 8 O4' A B 5 1.895 -27.900 10.419 1.00 29.95 O
ATOM 9 C3' A B 5 1.224 -26.160 9.026 1.00 33.53 C
ATOM 10 O3' A B 5 1.405 -24.795 8.700 1.00 37.04 O
ATOM 11 C2' A B 5 2.079 -27.108 8.190 1.00 39.31 C
ATOM 12 O2' A B 5 3.379 -26.581 7.998 1.00 43.72 O
ATOM 13 C1' A B 5 2.195 -28.313 9.106 1.00 31.74 C
ATOM 14 N9 A B 5 1.294 -29.425 8.718 1.00 23.96 N
ATOM 15 C8 A B 5 0.115 -29.848 9.283 1.00 17.29 C
ATOM 16 N7 A B 5 -0.384 -30.904 8.720 1.00 14.78 N
ATOM 17 C5 A B 5 0.527 -31.196 7.718 1.00 8.74 C
ATOM 18 C6 A B 5 0.567 -32.215 6.774 1.00 12.78 C
ATOM 19 N6 A B 5 -0.384 -33.157 6.705 1.00 18.73 N
ATOM 20 N1 A B 5 1.620 -32.228 5.906 1.00 13.30 N
ATOM 21 C2 A B 5 2.566 -31.274 5.997 1.00 14.53 C
ATOM 22 N3 A B 5 2.657 -30.283 6.873 1.00 22.72 N
ATOM 23 C4 A B 5 1.584 -30.316 7.714 1.00 18.18 C
ATOM 24 P G B 6 0.383 -24.050 7.730 1.00 33.53 P
ATOM 25 OP1 G B 6 0.803 -22.622 7.647 1.00 32.72 O
ATOM 26 OP2 G B 6 -0.979 -24.362 8.205 1.00 32.20 O
ATOM 27 O5' G B 6 0.652 -24.766 6.341 1.00 50.33 O
TER
ATOM 2 P G A 6 0.383 -24.050 7.730 1.00 33.53 P
ATOM 3 OP1 G A 6 0.803 -22.622 7.647 1.00 32.72 O
ATOM 4 OP2 G A 6 -0.979 -24.362 8.205 1.00 32.20 O
ATOM 5 O5' G A 6 0.652 -24.766 6.341 1.00 50.33 O
ATOM 6 C5' G A 6 1.970 -25.105 5.946 1.00 34.42 C
ATOM 7 C4' G A 6 1.985 -25.964 4.713 1.00 28.68 C
ATOM 8 O4' G A 6 1.502 -27.297 5.028 1.00 30.85 O
ATOM 9 C3' G A 6 1.129 -25.456 3.547 1.00 38.94 C
ATOM 10 O3' G A 6 1.932 -25.267 2.392 1.00 49.23 O
ATOM 11 C2' G A 6 0.129 -26.583 3.287 1.00 37.15 C
ATOM 12 O2' G A 6 -0.182 -26.786 1.920 1.00 35.78 O
ATOM 13 C1' G A 6 0.831 -27.794 3.895 1.00 33.65 C
ATOM 14 N9 G A 6 -0.092 -28.857 4.291 1.00 26.60 N
ATOM 15 C8 G A 6 -1.034 -28.784 5.278 1.00 13.66 C
ATOM 16 N7 G A 6 -1.764 -29.859 5.313 1.00 18.83 N
ATOM 17 C5 G A 6 -1.305 -30.695 4.295 1.00 28.05 C
ATOM 18 C6 G A 6 -1.734 -31.992 3.857 1.00 25.39 C
ATOM 19 O6 G A 6 -2.619 -32.713 4.307 1.00 20.19 O
ATOM 20 N1 G A 6 -1.002 -32.456 2.775 1.00 24.89 N
ATOM 21 C2 G A 6 0.011 -31.757 2.180 1.00 29.45 C
ATOM 22 N2 G A 6 0.599 -32.368 1.139 1.00 35.00 N
ATOM 23 N3 G A 6 0.424 -30.556 2.567 1.00 30.81 N
ATOM 24 C4 G A 6 -0.274 -30.070 3.628 1.00 32.56 C
ATOM 25 P C A 7 2.098 -23.792 1.805 1.00 37.34 P
ATOM 26 OP1 C A 7 2.964 -23.892 0.610 1.00 38.93 O
ATOM 27 OP2 C A 7 2.520 -22.941 2.931 1.00 40.20 O
ATOM 28 O5' C A 7 0.628 -23.410 1.365 1.00 36.11 O
TER
ATOM 1 O3' C B 4 -0.986 -27.311 13.692 1.00 48.62 O
ATOM 2 P A B 5 -1.704 -26.738 12.371 1.00 26.70 P
ATOM 3 OP1 A B 5 -2.048 -25.323 12.638 1.00 30.20 O
ATOM 4 OP2 A B 5 -2.778 -27.666 12.015 1.00 32.94 O
ATOM 5 O5' A B 5 -0.553 -26.805 11.287 1.00 24.07 O
ATOM 6 C5' A B 5 0.672 -26.142 11.504 1.00 28.08 C
ATOM 7 C4' A B 5 1.661 -26.475 10.435 1.00 29.90 C
ATOM 8 O4' A B 5 1.895 -27.900 10.419 1.00 29.95 O
ATOM 9 C3' A B 5 1.224 -26.160 9.026 1.00 33.53 C
ATOM 10 O3' A B 5 1.405 -24.795 8.700 1.00 37.04 O
ATOM 11 C2' A B 5 2.079 -27.108 8.190 1.00 39.31 C
ATOM 12 O2' A B 5 3.379 -26.581 7.998 1.00 43.72 O
ATOM 13 C1' A B 5 2.195 -28.313 9.106 1.00 31.74 C
ATOM 14 N9 A B 5 1.294 -29.425 8.718 1.00 23.96 N
ATOM 15 C8 A B 5 0.115 -29.848 9.283 1.00 17.29 C
ATOM 16 N7 A B 5 -0.384 -30.904 8.720 1.00 14.78 N
ATOM 17 C5 A B 5 0.527 -31.196 7.718 1.00 8.74 C
ATOM 18 C6 A B 5 0.567 -32.215 6.774 1.00 12.78 C
ATOM 19 N6 A B 5 -0.384 -33.157 6.705 1.00 18.73 N
ATOM 20 N1 A B 5 1.620 -32.228 5.906 1.00 13.30 N
ATOM 21 C2 A B 5 2.566 -31.274 5.997 1.00 14.53 C
ATOM 22 N3 A B 5 2.657 -30.283 6.873 1.00 22.72 N
ATOM 23 C4 A B 5 1.584 -30.316 7.714 1.00 18.18 C
ATOM 24 P G B 6 0.383 -24.050 7.730 1.00 33.53 P
ATOM 25 OP1 G B 6 0.803 -22.622 7.647 1.00 32.72 O
ATOM 26 OP2 G B 6 -0.979 -24.362 8.205 1.00 32.20 O
ATOM 27 O5' G B 6 0.652 -24.766 6.341 1.00 50.33 O
TER
Atoms:
OP1: (0.803,-22.622,7.647)
OP2: (-0.979,-24.362,8.205)
C3': (1.129,-25.456,3.547)
C1': (0.831,-27.794,3.895)
C5': (1.970,-25.105,5.946)
O6: (-2.619,-32.713,4.307)
O4': (1.502,-27.297,5.028)
C8: (-1.034,-28.784,5.278)
C2: (0.011,-31.757,2.180)
C6: (-1.734,-31.992,3.857)
C5: (-1.305,-30.695,4.295)
C4: (-0.274,-30.070,3.628)
P: (0.383,-24.050,7.730)
C4': (1.985,-25.964,4.713)
C2': (0.129,-26.583,3.287)
O2': (-0.182,-26.786,1.920)
N1: (-1.002,-32.456,2.775)
N2: (0.599,-32.368,1.139)
N3: (0.424,-30.556,2.567)
N7: (-1.764,-29.859,5.313)
N9: (-0.092,-28.857,4.291)
O5': (0.652,-24.766,6.341)
O3': (1.932,-25.267,2.392)
OP2: (-0.979,-24.362,8.205)
C3': (1.129,-25.456,3.547)
C1': (0.831,-27.794,3.895)
C5': (1.970,-25.105,5.946)
O6: (-2.619,-32.713,4.307)
O4': (1.502,-27.297,5.028)
C8: (-1.034,-28.784,5.278)
C2: (0.011,-31.757,2.180)
C6: (-1.734,-31.992,3.857)
C5: (-1.305,-30.695,4.295)
C4: (-0.274,-30.070,3.628)
P: (0.383,-24.050,7.730)
C4': (1.985,-25.964,4.713)
C2': (0.129,-26.583,3.287)
O2': (-0.182,-26.786,1.920)
N1: (-1.002,-32.456,2.775)
N2: (0.599,-32.368,1.139)
N3: (0.424,-30.556,2.567)
N7: (-1.764,-29.859,5.313)
N9: (-0.092,-28.857,4.291)
O5': (0.652,-24.766,6.341)
O3': (1.932,-25.267,2.392)
OP1: (-2.048,-25.323,12.638)
OP2: (-2.778,-27.666,12.015)
C3': (1.224,-26.160,9.026)
C1': (2.195,-28.313,9.106)
C5': (0.672,-26.142,11.504)
O4': (1.895,-27.900,10.419)
C8: (0.115,-29.848,9.283)
O2': (3.379,-26.581,7.998)
C6: (0.567,-32.215,6.774)
C5: (0.527,-31.196,7.718)
C4: (1.584,-30.316,7.714)
P: (-1.704,-26.738,12.371)
C4': (1.661,-26.475,10.435)
C2': (2.079,-27.108,8.190)
C2: (2.566,-31.274,5.997)
N1: (1.620,-32.228,5.906)
N3: (2.657,-30.283,6.873)
N6: (-0.384,-33.157,6.705)
N7: (-0.384,-30.904,8.720)
N9: (1.294,-29.425,8.718)
O5': (-0.553,-26.805,11.287)
O3': (1.405,-24.795,8.700)
OP2: (-2.778,-27.666,12.015)
C3': (1.224,-26.160,9.026)
C1': (2.195,-28.313,9.106)
C5': (0.672,-26.142,11.504)
O4': (1.895,-27.900,10.419)
C8: (0.115,-29.848,9.283)
O2': (3.379,-26.581,7.998)
C6: (0.567,-32.215,6.774)
C5: (0.527,-31.196,7.718)
C4: (1.584,-30.316,7.714)
P: (-1.704,-26.738,12.371)
C4': (1.661,-26.475,10.435)
C2': (2.079,-27.108,8.190)
C2: (2.566,-31.274,5.997)
N1: (1.620,-32.228,5.906)
N3: (2.657,-30.283,6.873)
N6: (-0.384,-33.157,6.705)
N7: (-0.384,-30.904,8.720)
N9: (1.294,-29.425,8.718)
O5': (-0.553,-26.805,11.287)
O3': (1.405,-24.795,8.700)
Image (generated by PyMOL):