ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A908:A909

Extra

PDB:
ATOM 1 O3' A A 907 -122.126 40.826 9.485 1.00 45.80 O
ATOM 2 P C A 908 -122.933 40.549 10.841 1.00 74.36 P
ATOM 3 OP1 C A 908 -123.409 39.139 10.799 1.00 85.61 O
ATOM 4 OP2 C A 908 -123.913 41.650 11.039 1.00 89.11 O
ATOM 5 O5' C A 908 -121.802 40.671 11.960 1.00 34.16 O
ATOM 6 C5' C A 908 -120.755 39.682 12.054 1.00 32.17 C
ATOM 7 C4' C A 908 -119.772 40.039 13.146 1.00 30.47 C
ATOM 8 O4' C A 908 -119.107 41.293 12.826 1.00 30.95 O
ATOM 9 C3' C A 908 -120.340 40.254 14.534 1.00 31.68 C
ATOM 10 O3' C A 908 -120.565 39.021 15.215 1.00 33.27 O
ATOM 11 C2' C A 908 -119.260 41.112 15.187 1.00 31.19 C
ATOM 12 O2' C A 908 -118.167 40.365 15.672 1.00 31.33 O
ATOM 13 C1' C A 908 -118.789 41.982 14.019 1.00 29.13 C
ATOM 14 N1 C A 908 -119.472 43.286 14.007 1.00 59.48 N
ATOM 15 C2 C A 908 -119.062 44.269 14.917 1.00 59.22 C
ATOM 16 O2 C A 908 -118.098 44.039 15.647 1.00 60.09 O
ATOM 17 N3 C A 908 -119.731 45.444 14.972 1.00 60.45 N
ATOM 18 C4 C A 908 -120.765 45.662 14.153 1.00 60.94 C
ATOM 19 N4 C A 908 -121.419 46.823 14.260 1.00 57.90 N
ATOM 20 C5 C A 908 -121.180 44.693 13.189 1.00 59.14 C
ATOM 21 C6 C A 908 -120.510 43.531 13.150 1.00 59.72 C
ATOM 22 P A A 909 -121.801 38.881 16.251 1.00 58.88 P
ATOM 23 OP1 A A 909 -121.785 37.484 16.752 1.00 71.61 O
ATOM 24 OP2 A A 909 -123.049 39.422 15.642 1.00 74.66 O
ATOM 25 O5' A A 909 -121.412 39.854 17.454 1.00 41.11 O
TER

ATOM 1 O3' C B 908 -120.565 39.021 15.215 1.00 33.27 O
ATOM 2 P A B 909 -121.801 38.881 16.251 1.00 58.88 P
ATOM 3 OP1 A B 909 -121.785 37.484 16.752 1.00 71.61 O
ATOM 4 OP2 A B 909 -123.049 39.422 15.642 1.00 74.66 O
ATOM 5 O5' A B 909 -121.412 39.854 17.454 1.00 41.11 O
ATOM 6 C5' A B 909 -120.152 39.716 18.147 1.00 40.53 C
ATOM 7 C4' A B 909 -119.782 41.007 18.860 1.00 41.18 C
ATOM 8 O4' A B 909 -119.579 42.062 17.883 1.00 42.72 O
ATOM 9 C3' A B 909 -120.801 41.598 19.831 1.00 42.27 C
ATOM 10 O3' A B 909 -120.808 41.006 21.121 1.00 45.01 O
ATOM 11 C2' A B 909 -120.393 43.063 19.876 1.00 42.15 C
ATOM 12 O2' A B 909 -119.267 43.309 20.705 1.00 41.57 O
ATOM 13 C1' A B 909 -120.026 43.303 18.413 1.00 41.25 C
ATOM 14 N9 A B 909 -121.207 43.733 17.654 1.00 48.34 N
ATOM 15 C8 A B 909 -121.960 43.008 16.761 1.00 48.67 C
ATOM 16 N7 A B 909 -122.964 43.676 16.251 1.00 47.95 N
ATOM 17 C5 A B 909 -122.868 44.928 16.843 1.00 47.08 C
ATOM 18 C6 A B 909 -123.645 46.091 16.728 1.00 45.74 C
ATOM 19 N6 A B 909 -124.698 46.201 15.922 1.00 45.85 N
ATOM 20 N1 A B 909 -123.297 47.155 17.479 1.00 45.18 N
ATOM 21 C2 A B 909 -122.237 47.053 18.285 1.00 45.67 C
ATOM 22 N3 A B 909 -121.422 46.024 18.476 1.00 44.08 N
ATOM 23 C4 A B 909 -121.797 44.976 17.716 1.00 46.23 C
ATOM 24 P A B 910 -122.214 40.763 21.861 1.00 37.49 P
ATOM 25 OP1 A B 910 -121.912 40.260 23.233 1.00 43.03 O
ATOM 26 OP2 A B 910 -123.113 39.974 20.968 1.00 44.48 O
ATOM 27 O5' A B 910 -122.835 42.227 21.987 1.00 55.45 O
TER

Atoms:
C2: (-119.062,44.269,14.917)
OP1: (-123.409,39.139,10.799)
OP2: (-123.913,41.650,11.039)
C4: (-120.765,45.662,14.153)
O5': (-121.802,40.671,11.960)
C3': (-120.340,40.254,14.534)
C1': (-118.789,41.982,14.019)
O4': (-119.107,41.293,12.826)
C5': (-120.755,39.682,12.054)
P: (-122.933,40.549,10.841)
O2: (-118.098,44.039,15.647)
C4': (-119.772,40.039,13.146)
C2': (-119.260,41.112,15.187)
O2': (-118.167,40.365,15.672)
N1: (-119.472,43.286,14.007)
N3: (-119.731,45.444,14.972)
N4: (-121.419,46.823,14.260)
C6: (-120.510,43.531,13.150)
C5: (-121.180,44.693,13.189)
O3': (-120.565,39.021,15.215)
OP1: (-121.785,37.484,16.752)
OP2: (-123.049,39.422,15.642)
C3': (-120.801,41.598,19.831)
C1': (-120.026,43.303,18.413)
C5': (-120.152,39.716,18.147)
O4': (-119.579,42.062,17.883)
C8: (-121.960,43.008,16.761)
O2': (-119.267,43.309,20.705)
C6: (-123.645,46.091,16.728)
C5: (-122.868,44.928,16.843)
C4: (-121.797,44.976,17.716)
P: (-121.801,38.881,16.251)
C4': (-119.782,41.007,18.860)
C2': (-120.393,43.063,19.876)
C2: (-122.237,47.053,18.285)
N1: (-123.297,47.155,17.479)
N3: (-121.422,46.024,18.476)
N6: (-124.698,46.201,15.922)
N7: (-122.964,43.676,16.251)
N9: (-121.207,43.733,17.654)
O5': (-121.412,39.854,17.454)
O3': (-120.808,41.006,21.121)
Image (generated by PyMOL):
PyMOL image
show in jmol