Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0248:0249
Extra
PDB:
ATOM 1 O3' G A 247 94.695 134.670 4.794 1.00 56.67 O
ATOM 2 P C A 248 95.626 133.400 4.454 1.00 57.53 P
ATOM 3 OP1 C A 248 96.657 133.307 5.513 1.00 55.85 O
ATOM 4 OP2 C A 248 96.039 133.449 3.029 1.00 58.10 O
ATOM 5 O5' C A 248 94.648 132.155 4.590 1.00 57.18 O
ATOM 6 C5' C A 248 93.846 131.975 5.761 1.00 55.10 C
ATOM 7 C4' C A 248 92.857 130.861 5.545 1.00 52.73 C
ATOM 8 O4' C A 248 91.933 131.222 4.489 1.00 53.21 O
ATOM 9 C3' C A 248 93.440 129.538 5.088 1.00 50.16 C
ATOM 10 O3' C A 248 93.930 128.813 6.203 1.00 48.63 O
ATOM 11 C2' C A 248 92.225 128.862 4.472 1.00 52.19 C
ATOM 12 O2' C A 248 91.365 128.334 5.461 1.00 51.82 O
ATOM 13 C1' C A 248 91.522 130.051 3.808 1.00 53.56 C
ATOM 14 N1 C A 248 91.794 130.208 2.363 1.00 55.85 N
ATOM 15 C2 C A 248 91.189 129.316 1.469 1.00 56.28 C
ATOM 16 O2 C A 248 90.477 128.411 1.921 1.00 55.96 O
ATOM 17 N3 C A 248 91.402 129.462 0.138 1.00 56.92 N
ATOM 18 C4 C A 248 92.192 130.440 -0.309 1.00 56.29 C
ATOM 19 N4 C A 248 92.372 130.541 -1.626 1.00 55.55 N
ATOM 20 C5 C A 248 92.832 131.357 0.577 1.00 56.19 C
ATOM 21 C6 C A 248 92.608 131.205 1.892 1.00 57.08 C
ATOM 22 P A A 249 95.220 127.874 6.048 1.00 48.69 P
ATOM 23 OP1 A A 249 95.416 127.164 7.337 1.00 48.33 O
ATOM 24 OP2 A A 249 96.323 128.677 5.491 1.00 49.20 O
ATOM 25 O5' A A 249 94.782 126.811 4.949 1.00 50.11 O
TER
ATOM 1 O3' C B 248 93.930 128.813 6.203 1.00 48.63 O
ATOM 2 P A B 249 95.220 127.874 6.048 1.00 48.69 P
ATOM 3 OP1 A B 249 95.416 127.164 7.337 1.00 48.33 O
ATOM 4 OP2 A B 249 96.323 128.677 5.491 1.00 49.20 O
ATOM 5 O5' A B 249 94.782 126.811 4.949 1.00 50.11 O
ATOM 6 C5' A B 249 93.861 125.751 5.262 1.00 49.93 C
ATOM 7 C4' A B 249 93.557 124.959 4.019 1.00 50.81 C
ATOM 8 O4' A B 249 92.786 125.780 3.104 1.00 51.77 O
ATOM 9 C3' A B 249 94.787 124.557 3.221 1.00 50.69 C
ATOM 10 O3' A B 249 95.397 123.375 3.720 1.00 50.81 O
ATOM 11 C2' A B 249 94.219 124.383 1.821 1.00 51.49 C
ATOM 12 O2' A B 249 93.553 123.153 1.645 1.00 52.22 O
ATOM 13 C1' A B 249 93.209 125.533 1.769 1.00 53.70 C
ATOM 14 N9 A B 249 93.825 126.753 1.241 1.00 56.63 N
ATOM 15 C8 A B 249 94.343 127.822 1.936 1.00 57.05 C
ATOM 16 N7 A B 249 94.886 128.735 1.172 1.00 57.80 N
ATOM 17 C5 A B 249 94.705 128.243 -0.114 1.00 58.88 C
ATOM 18 C6 A B 249 95.070 128.739 -1.375 1.00 59.58 C
ATOM 19 N6 A B 249 95.745 129.873 -1.555 1.00 62.05 N
ATOM 20 N1 A B 249 94.724 128.016 -2.459 1.00 60.49 N
ATOM 21 C2 A B 249 94.070 126.864 -2.278 1.00 61.04 C
ATOM 22 N3 A B 249 93.685 126.284 -1.145 1.00 60.06 N
ATOM 23 C4 A B 249 94.036 127.035 -0.086 1.00 58.10 C
ATOM 24 P A B 250 96.963 123.376 4.074 1.00 51.28 P
ATOM 25 OP1 A B 250 97.109 123.288 5.543 1.00 51.90 O
ATOM 26 OP2 A B 250 97.578 124.507 3.352 1.00 53.04 O
ATOM 27 O5' A B 250 97.509 122.014 3.449 1.00 51.65 O
TER
ATOM 2 P C A 248 95.626 133.400 4.454 1.00 57.53 P
ATOM 3 OP1 C A 248 96.657 133.307 5.513 1.00 55.85 O
ATOM 4 OP2 C A 248 96.039 133.449 3.029 1.00 58.10 O
ATOM 5 O5' C A 248 94.648 132.155 4.590 1.00 57.18 O
ATOM 6 C5' C A 248 93.846 131.975 5.761 1.00 55.10 C
ATOM 7 C4' C A 248 92.857 130.861 5.545 1.00 52.73 C
ATOM 8 O4' C A 248 91.933 131.222 4.489 1.00 53.21 O
ATOM 9 C3' C A 248 93.440 129.538 5.088 1.00 50.16 C
ATOM 10 O3' C A 248 93.930 128.813 6.203 1.00 48.63 O
ATOM 11 C2' C A 248 92.225 128.862 4.472 1.00 52.19 C
ATOM 12 O2' C A 248 91.365 128.334 5.461 1.00 51.82 O
ATOM 13 C1' C A 248 91.522 130.051 3.808 1.00 53.56 C
ATOM 14 N1 C A 248 91.794 130.208 2.363 1.00 55.85 N
ATOM 15 C2 C A 248 91.189 129.316 1.469 1.00 56.28 C
ATOM 16 O2 C A 248 90.477 128.411 1.921 1.00 55.96 O
ATOM 17 N3 C A 248 91.402 129.462 0.138 1.00 56.92 N
ATOM 18 C4 C A 248 92.192 130.440 -0.309 1.00 56.29 C
ATOM 19 N4 C A 248 92.372 130.541 -1.626 1.00 55.55 N
ATOM 20 C5 C A 248 92.832 131.357 0.577 1.00 56.19 C
ATOM 21 C6 C A 248 92.608 131.205 1.892 1.00 57.08 C
ATOM 22 P A A 249 95.220 127.874 6.048 1.00 48.69 P
ATOM 23 OP1 A A 249 95.416 127.164 7.337 1.00 48.33 O
ATOM 24 OP2 A A 249 96.323 128.677 5.491 1.00 49.20 O
ATOM 25 O5' A A 249 94.782 126.811 4.949 1.00 50.11 O
TER
ATOM 1 O3' C B 248 93.930 128.813 6.203 1.00 48.63 O
ATOM 2 P A B 249 95.220 127.874 6.048 1.00 48.69 P
ATOM 3 OP1 A B 249 95.416 127.164 7.337 1.00 48.33 O
ATOM 4 OP2 A B 249 96.323 128.677 5.491 1.00 49.20 O
ATOM 5 O5' A B 249 94.782 126.811 4.949 1.00 50.11 O
ATOM 6 C5' A B 249 93.861 125.751 5.262 1.00 49.93 C
ATOM 7 C4' A B 249 93.557 124.959 4.019 1.00 50.81 C
ATOM 8 O4' A B 249 92.786 125.780 3.104 1.00 51.77 O
ATOM 9 C3' A B 249 94.787 124.557 3.221 1.00 50.69 C
ATOM 10 O3' A B 249 95.397 123.375 3.720 1.00 50.81 O
ATOM 11 C2' A B 249 94.219 124.383 1.821 1.00 51.49 C
ATOM 12 O2' A B 249 93.553 123.153 1.645 1.00 52.22 O
ATOM 13 C1' A B 249 93.209 125.533 1.769 1.00 53.70 C
ATOM 14 N9 A B 249 93.825 126.753 1.241 1.00 56.63 N
ATOM 15 C8 A B 249 94.343 127.822 1.936 1.00 57.05 C
ATOM 16 N7 A B 249 94.886 128.735 1.172 1.00 57.80 N
ATOM 17 C5 A B 249 94.705 128.243 -0.114 1.00 58.88 C
ATOM 18 C6 A B 249 95.070 128.739 -1.375 1.00 59.58 C
ATOM 19 N6 A B 249 95.745 129.873 -1.555 1.00 62.05 N
ATOM 20 N1 A B 249 94.724 128.016 -2.459 1.00 60.49 N
ATOM 21 C2 A B 249 94.070 126.864 -2.278 1.00 61.04 C
ATOM 22 N3 A B 249 93.685 126.284 -1.145 1.00 60.06 N
ATOM 23 C4 A B 249 94.036 127.035 -0.086 1.00 58.10 C
ATOM 24 P A B 250 96.963 123.376 4.074 1.00 51.28 P
ATOM 25 OP1 A B 250 97.109 123.288 5.543 1.00 51.90 O
ATOM 26 OP2 A B 250 97.578 124.507 3.352 1.00 53.04 O
ATOM 27 O5' A B 250 97.509 122.014 3.449 1.00 51.65 O
TER
Atoms:
C2: (91.189,129.316,1.469)
OP1: (96.657,133.307,5.513)
OP2: (96.039,133.449,3.029)
C4: (92.192,130.440,-0.309)
O5': (94.648,132.155,4.590)
C3': (93.440,129.538,5.088)
C1': (91.522,130.051,3.808)
O4': (91.933,131.222,4.489)
C5': (93.846,131.975,5.761)
P: (95.626,133.400,4.454)
O2: (90.477,128.411,1.921)
C4': (92.857,130.861,5.545)
C2': (92.225,128.862,4.472)
O2': (91.365,128.334,5.461)
N1: (91.794,130.208,2.363)
N3: (91.402,129.462,0.138)
N4: (92.372,130.541,-1.626)
C6: (92.608,131.205,1.892)
C5: (92.832,131.357,0.577)
O3': (93.930,128.813,6.203)
OP1: (96.657,133.307,5.513)
OP2: (96.039,133.449,3.029)
C4: (92.192,130.440,-0.309)
O5': (94.648,132.155,4.590)
C3': (93.440,129.538,5.088)
C1': (91.522,130.051,3.808)
O4': (91.933,131.222,4.489)
C5': (93.846,131.975,5.761)
P: (95.626,133.400,4.454)
O2: (90.477,128.411,1.921)
C4': (92.857,130.861,5.545)
C2': (92.225,128.862,4.472)
O2': (91.365,128.334,5.461)
N1: (91.794,130.208,2.363)
N3: (91.402,129.462,0.138)
N4: (92.372,130.541,-1.626)
C6: (92.608,131.205,1.892)
C5: (92.832,131.357,0.577)
O3': (93.930,128.813,6.203)
OP1: (95.416,127.164,7.337)
OP2: (96.323,128.677,5.491)
C3': (94.787,124.557,3.221)
C1': (93.209,125.533,1.769)
C5': (93.861,125.751,5.262)
O4': (92.786,125.780,3.104)
C8: (94.343,127.822,1.936)
O2': (93.553,123.153,1.645)
C6: (95.070,128.739,-1.375)
C5: (94.705,128.243,-0.114)
C4: (94.036,127.035,-0.086)
P: (95.220,127.874,6.048)
C4': (93.557,124.959,4.019)
C2': (94.219,124.383,1.821)
C2: (94.070,126.864,-2.278)
N1: (94.724,128.016,-2.459)
N3: (93.685,126.284,-1.145)
N6: (95.745,129.873,-1.555)
N7: (94.886,128.735,1.172)
N9: (93.825,126.753,1.241)
O5': (94.782,126.811,4.949)
O3': (95.397,123.375,3.720)
OP2: (96.323,128.677,5.491)
C3': (94.787,124.557,3.221)
C1': (93.209,125.533,1.769)
C5': (93.861,125.751,5.262)
O4': (92.786,125.780,3.104)
C8: (94.343,127.822,1.936)
O2': (93.553,123.153,1.645)
C6: (95.070,128.739,-1.375)
C5: (94.705,128.243,-0.114)
C4: (94.036,127.035,-0.086)
P: (95.220,127.874,6.048)
C4': (93.557,124.959,4.019)
C2': (94.219,124.383,1.821)
C2: (94.070,126.864,-2.278)
N1: (94.724,128.016,-2.459)
N3: (93.685,126.284,-1.145)
N6: (95.745,129.873,-1.555)
N7: (94.886,128.735,1.172)
N9: (93.825,126.753,1.241)
O5': (94.782,126.811,4.949)
O3': (95.397,123.375,3.720)
Image (generated by PyMOL):