Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01278:01277
Extra
PDB:
ATOM 1 O3' A A1277 19.513 129.237 61.418 1.00 40.53 O
ATOM 2 P G A1278 19.399 129.156 63.012 1.00 40.92 P
ATOM 3 OP1 G A1278 20.001 127.862 63.399 1.00 41.33 O
ATOM 4 OP2 G A1278 18.011 129.460 63.417 1.00 41.28 O
ATOM 5 O5' G A1278 20.336 130.346 63.498 1.00 40.33 O
ATOM 6 C5' G A1278 21.739 130.371 63.148 1.00 40.19 C
ATOM 7 C4' G A1278 22.346 131.699 63.526 1.00 38.49 C
ATOM 8 O4' G A1278 21.707 132.747 62.756 1.00 40.54 O
ATOM 9 C3' G A1278 22.107 132.113 64.961 1.00 37.70 C
ATOM 10 O3' G A1278 23.019 131.493 65.844 1.00 36.56 O
ATOM 11 C2' G A1278 22.232 133.626 64.888 1.00 38.15 C
ATOM 12 O2' G A1278 23.560 134.083 64.786 1.00 38.26 O
ATOM 13 C1' G A1278 21.535 133.905 63.561 1.00 39.49 C
ATOM 14 N9 G A1278 20.104 134.138 63.732 1.00 39.65 N
ATOM 15 C8 G A1278 19.096 133.221 63.566 1.00 40.25 C
ATOM 16 N7 G A1278 17.915 133.707 63.831 1.00 41.92 N
ATOM 17 C5 G A1278 18.157 135.028 64.183 1.00 40.40 C
ATOM 18 C6 G A1278 17.261 136.044 64.581 1.00 39.70 C
ATOM 19 O6 G A1278 16.034 135.985 64.683 1.00 40.58 O
ATOM 20 N1 G A1278 17.924 137.227 64.868 1.00 39.02 N
ATOM 21 C2 G A1278 19.277 137.416 64.766 1.00 40.30 C
ATOM 22 N2 G A1278 19.733 138.648 65.083 1.00 40.75 N
ATOM 23 N3 G A1278 20.126 136.475 64.382 1.00 39.69 N
ATOM 24 C4 G A1278 19.501 135.313 64.115 1.00 39.48 C
ATOM 25 P C A1279 22.521 131.052 67.303 1.00 37.32 P
ATOM 26 OP1 C A1279 23.691 130.434 67.963 1.00 38.20 O
ATOM 27 OP2 C A1279 21.257 130.286 67.188 1.00 36.21 O
ATOM 28 O5' C A1279 22.226 132.431 68.035 1.00 35.19 O
TER
ATOM 1 O3' A B1276 14.108 130.404 58.940 1.00 44.29 O
ATOM 2 P A B1277 14.607 130.327 60.464 1.00 44.58 P
ATOM 3 OP1 A B1277 14.281 128.958 60.958 1.00 44.18 O
ATOM 4 OP2 A B1277 14.106 131.518 61.204 1.00 42.38 O
ATOM 5 O5' A B1277 16.187 130.454 60.342 1.00 42.91 O
ATOM 6 C5' A B1277 16.946 129.530 59.549 1.00 40.34 C
ATOM 7 C4' A B1277 18.369 130.009 59.431 1.00 39.34 C
ATOM 8 O4' A B1277 18.408 131.244 58.673 1.00 39.61 O
ATOM 9 C3' A B1277 19.027 130.381 60.744 1.00 38.33 C
ATOM 10 O3' A B1277 19.513 129.237 61.418 1.00 40.53 O
ATOM 11 C2' A B1277 20.140 131.306 60.288 1.00 37.32 C
ATOM 12 O2' A B1277 21.226 130.590 59.736 1.00 35.97 O
ATOM 13 C1' A B1277 19.427 132.087 59.185 1.00 37.02 C
ATOM 14 N9 A B1277 18.799 133.308 59.684 1.00 35.51 N
ATOM 15 C8 A B1277 17.489 133.496 60.042 1.00 34.37 C
ATOM 16 N7 A B1277 17.230 134.701 60.479 1.00 34.66 N
ATOM 17 C5 A B1277 18.451 135.355 60.403 1.00 34.88 C
ATOM 18 C6 A B1277 18.851 136.662 60.738 1.00 34.53 C
ATOM 19 N6 A B1277 18.032 137.585 61.243 1.00 33.17 N
ATOM 20 N1 A B1277 20.144 136.992 60.534 1.00 34.47 N
ATOM 21 C2 A B1277 20.969 136.070 60.030 1.00 33.60 C
ATOM 22 N3 A B1277 20.716 134.814 59.685 1.00 34.24 N
ATOM 23 C4 A B1277 19.424 134.513 59.902 1.00 35.53 C
ATOM 24 P G B1278 19.399 129.156 63.012 1.00 40.92 P
ATOM 25 OP1 G B1278 20.001 127.862 63.399 1.00 41.33 O
ATOM 26 OP2 G B1278 18.011 129.460 63.417 1.00 41.28 O
ATOM 27 O5' G B1278 20.336 130.346 63.498 1.00 40.33 O
TER
ATOM 2 P G A1278 19.399 129.156 63.012 1.00 40.92 P
ATOM 3 OP1 G A1278 20.001 127.862 63.399 1.00 41.33 O
ATOM 4 OP2 G A1278 18.011 129.460 63.417 1.00 41.28 O
ATOM 5 O5' G A1278 20.336 130.346 63.498 1.00 40.33 O
ATOM 6 C5' G A1278 21.739 130.371 63.148 1.00 40.19 C
ATOM 7 C4' G A1278 22.346 131.699 63.526 1.00 38.49 C
ATOM 8 O4' G A1278 21.707 132.747 62.756 1.00 40.54 O
ATOM 9 C3' G A1278 22.107 132.113 64.961 1.00 37.70 C
ATOM 10 O3' G A1278 23.019 131.493 65.844 1.00 36.56 O
ATOM 11 C2' G A1278 22.232 133.626 64.888 1.00 38.15 C
ATOM 12 O2' G A1278 23.560 134.083 64.786 1.00 38.26 O
ATOM 13 C1' G A1278 21.535 133.905 63.561 1.00 39.49 C
ATOM 14 N9 G A1278 20.104 134.138 63.732 1.00 39.65 N
ATOM 15 C8 G A1278 19.096 133.221 63.566 1.00 40.25 C
ATOM 16 N7 G A1278 17.915 133.707 63.831 1.00 41.92 N
ATOM 17 C5 G A1278 18.157 135.028 64.183 1.00 40.40 C
ATOM 18 C6 G A1278 17.261 136.044 64.581 1.00 39.70 C
ATOM 19 O6 G A1278 16.034 135.985 64.683 1.00 40.58 O
ATOM 20 N1 G A1278 17.924 137.227 64.868 1.00 39.02 N
ATOM 21 C2 G A1278 19.277 137.416 64.766 1.00 40.30 C
ATOM 22 N2 G A1278 19.733 138.648 65.083 1.00 40.75 N
ATOM 23 N3 G A1278 20.126 136.475 64.382 1.00 39.69 N
ATOM 24 C4 G A1278 19.501 135.313 64.115 1.00 39.48 C
ATOM 25 P C A1279 22.521 131.052 67.303 1.00 37.32 P
ATOM 26 OP1 C A1279 23.691 130.434 67.963 1.00 38.20 O
ATOM 27 OP2 C A1279 21.257 130.286 67.188 1.00 36.21 O
ATOM 28 O5' C A1279 22.226 132.431 68.035 1.00 35.19 O
TER
ATOM 1 O3' A B1276 14.108 130.404 58.940 1.00 44.29 O
ATOM 2 P A B1277 14.607 130.327 60.464 1.00 44.58 P
ATOM 3 OP1 A B1277 14.281 128.958 60.958 1.00 44.18 O
ATOM 4 OP2 A B1277 14.106 131.518 61.204 1.00 42.38 O
ATOM 5 O5' A B1277 16.187 130.454 60.342 1.00 42.91 O
ATOM 6 C5' A B1277 16.946 129.530 59.549 1.00 40.34 C
ATOM 7 C4' A B1277 18.369 130.009 59.431 1.00 39.34 C
ATOM 8 O4' A B1277 18.408 131.244 58.673 1.00 39.61 O
ATOM 9 C3' A B1277 19.027 130.381 60.744 1.00 38.33 C
ATOM 10 O3' A B1277 19.513 129.237 61.418 1.00 40.53 O
ATOM 11 C2' A B1277 20.140 131.306 60.288 1.00 37.32 C
ATOM 12 O2' A B1277 21.226 130.590 59.736 1.00 35.97 O
ATOM 13 C1' A B1277 19.427 132.087 59.185 1.00 37.02 C
ATOM 14 N9 A B1277 18.799 133.308 59.684 1.00 35.51 N
ATOM 15 C8 A B1277 17.489 133.496 60.042 1.00 34.37 C
ATOM 16 N7 A B1277 17.230 134.701 60.479 1.00 34.66 N
ATOM 17 C5 A B1277 18.451 135.355 60.403 1.00 34.88 C
ATOM 18 C6 A B1277 18.851 136.662 60.738 1.00 34.53 C
ATOM 19 N6 A B1277 18.032 137.585 61.243 1.00 33.17 N
ATOM 20 N1 A B1277 20.144 136.992 60.534 1.00 34.47 N
ATOM 21 C2 A B1277 20.969 136.070 60.030 1.00 33.60 C
ATOM 22 N3 A B1277 20.716 134.814 59.685 1.00 34.24 N
ATOM 23 C4 A B1277 19.424 134.513 59.902 1.00 35.53 C
ATOM 24 P G B1278 19.399 129.156 63.012 1.00 40.92 P
ATOM 25 OP1 G B1278 20.001 127.862 63.399 1.00 41.33 O
ATOM 26 OP2 G B1278 18.011 129.460 63.417 1.00 41.28 O
ATOM 27 O5' G B1278 20.336 130.346 63.498 1.00 40.33 O
TER
Atoms:
OP1: (20.001,127.862,63.399)
OP2: (18.011,129.460,63.417)
C3': (22.107,132.113,64.961)
C1': (21.535,133.905,63.561)
C5': (21.739,130.371,63.148)
O6: (16.034,135.985,64.683)
O4': (21.707,132.747,62.756)
C8: (19.096,133.221,63.566)
C2: (19.277,137.416,64.766)
C6: (17.261,136.044,64.581)
C5: (18.157,135.028,64.183)
C4: (19.501,135.313,64.115)
P: (19.399,129.156,63.012)
C4': (22.346,131.699,63.526)
C2': (22.232,133.626,64.888)
O2': (23.560,134.083,64.786)
N1: (17.924,137.227,64.868)
N2: (19.733,138.648,65.083)
N3: (20.126,136.475,64.382)
N7: (17.915,133.707,63.831)
N9: (20.104,134.138,63.732)
O5': (20.336,130.346,63.498)
O3': (23.019,131.493,65.844)
OP2: (18.011,129.460,63.417)
C3': (22.107,132.113,64.961)
C1': (21.535,133.905,63.561)
C5': (21.739,130.371,63.148)
O6: (16.034,135.985,64.683)
O4': (21.707,132.747,62.756)
C8: (19.096,133.221,63.566)
C2: (19.277,137.416,64.766)
C6: (17.261,136.044,64.581)
C5: (18.157,135.028,64.183)
C4: (19.501,135.313,64.115)
P: (19.399,129.156,63.012)
C4': (22.346,131.699,63.526)
C2': (22.232,133.626,64.888)
O2': (23.560,134.083,64.786)
N1: (17.924,137.227,64.868)
N2: (19.733,138.648,65.083)
N3: (20.126,136.475,64.382)
N7: (17.915,133.707,63.831)
N9: (20.104,134.138,63.732)
O5': (20.336,130.346,63.498)
O3': (23.019,131.493,65.844)
OP1: (14.281,128.958,60.958)
OP2: (14.106,131.518,61.204)
C3': (19.027,130.381,60.744)
C1': (19.427,132.087,59.185)
C5': (16.946,129.530,59.549)
O4': (18.408,131.244,58.673)
C8: (17.489,133.496,60.042)
O2': (21.226,130.590,59.736)
C6: (18.851,136.662,60.738)
C5: (18.451,135.355,60.403)
C4: (19.424,134.513,59.902)
P: (14.607,130.327,60.464)
C4': (18.369,130.009,59.431)
C2': (20.140,131.306,60.288)
C2: (20.969,136.070,60.030)
N1: (20.144,136.992,60.534)
N3: (20.716,134.814,59.685)
N6: (18.032,137.585,61.243)
N7: (17.230,134.701,60.479)
N9: (18.799,133.308,59.684)
O5': (16.187,130.454,60.342)
O3': (19.513,129.237,61.418)
OP2: (14.106,131.518,61.204)
C3': (19.027,130.381,60.744)
C1': (19.427,132.087,59.185)
C5': (16.946,129.530,59.549)
O4': (18.408,131.244,58.673)
C8: (17.489,133.496,60.042)
O2': (21.226,130.590,59.736)
C6: (18.851,136.662,60.738)
C5: (18.451,135.355,60.403)
C4: (19.424,134.513,59.902)
P: (14.607,130.327,60.464)
C4': (18.369,130.009,59.431)
C2': (20.140,131.306,60.288)
C2: (20.969,136.070,60.030)
N1: (20.144,136.992,60.534)
N3: (20.716,134.814,59.685)
N6: (18.032,137.585,61.243)
N7: (17.230,134.701,60.479)
N9: (18.799,133.308,59.684)
O5': (16.187,130.454,60.342)
O3': (19.513,129.237,61.418)
Image (generated by PyMOL):