Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:01236:01237
Extra
PDB:
ATOM 1 O3' U A1235 4.249 85.949 58.718 1.00 52.17 O
ATOM 2 P C A1236 5.082 85.151 57.593 1.00 52.84 P
ATOM 3 OP1 C A1236 4.294 85.175 56.332 1.00 52.14 O
ATOM 4 OP2 C A1236 5.481 83.840 58.178 1.00 52.26 O
ATOM 5 O5' C A1236 6.385 86.049 57.388 1.00 53.23 O
ATOM 6 C5' C A1236 7.527 85.559 56.650 1.00 53.58 C
ATOM 7 C4' C A1236 8.563 86.652 56.509 1.00 53.70 C
ATOM 8 O4' C A1236 8.052 87.707 55.657 1.00 54.77 O
ATOM 9 C3' C A1236 8.929 87.343 57.809 1.00 52.79 C
ATOM 10 O3' C A1236 9.942 86.601 58.471 1.00 51.85 O
ATOM 11 C2' C A1236 9.403 88.716 57.344 1.00 54.28 C
ATOM 12 O2' C A1236 10.741 88.728 56.882 1.00 54.47 O
ATOM 13 C1' C A1236 8.478 88.966 56.149 1.00 54.92 C
ATOM 14 N1 C A1236 7.287 89.792 56.428 1.00 55.43 N
ATOM 15 C2 C A1236 7.413 91.190 56.407 1.00 56.18 C
ATOM 16 O2 C A1236 8.534 91.694 56.215 1.00 58.27 O
ATOM 17 N3 C A1236 6.314 91.955 56.604 1.00 55.90 N
ATOM 18 C4 C A1236 5.131 91.380 56.831 1.00 55.99 C
ATOM 19 N4 C A1236 4.073 92.176 57.001 1.00 56.10 N
ATOM 20 C5 C A1236 4.979 89.963 56.890 1.00 55.88 C
ATOM 21 C6 C A1236 6.073 89.214 56.685 1.00 55.63 C
ATOM 22 P A A1237 9.951 86.516 60.073 1.00 51.94 P
ATOM 23 OP1 A A1237 11.114 85.671 60.449 1.00 50.76 O
ATOM 24 OP2 A A1237 8.590 86.148 60.548 1.00 53.01 O
ATOM 25 O5' A A1237 10.226 88.018 60.519 1.00 53.82 O
TER
ATOM 1 O3' C B1236 9.942 86.601 58.471 1.00 51.85 O
ATOM 2 P A B1237 9.951 86.516 60.073 1.00 51.94 P
ATOM 3 OP1 A B1237 11.114 85.671 60.449 1.00 50.76 O
ATOM 4 OP2 A B1237 8.590 86.148 60.548 1.00 53.01 O
ATOM 5 O5' A B1237 10.226 88.018 60.519 1.00 53.82 O
ATOM 6 C5' A B1237 11.516 88.627 60.327 1.00 56.73 C
ATOM 7 C4' A B1237 11.467 90.072 60.749 1.00 58.73 C
ATOM 8 O4' A B1237 10.569 90.786 59.865 1.00 58.46 O
ATOM 9 C3' A B1237 10.903 90.302 62.140 1.00 61.07 C
ATOM 10 O3' A B1237 11.923 90.162 63.121 1.00 67.22 O
ATOM 11 C2' A B1237 10.355 91.721 62.046 1.00 59.65 C
ATOM 12 O2' A B1237 11.355 92.709 62.199 1.00 60.50 O
ATOM 13 C1' A B1237 9.835 91.747 60.604 1.00 57.78 C
ATOM 14 N9 A B1237 8.422 91.412 60.472 1.00 56.36 N
ATOM 15 C8 A B1237 7.846 90.169 60.567 1.00 55.96 C
ATOM 16 N7 A B1237 6.548 90.174 60.399 1.00 55.79 N
ATOM 17 C5 A B1237 6.246 91.509 60.184 1.00 56.32 C
ATOM 18 C6 A B1237 5.035 92.172 59.957 1.00 58.15 C
ATOM 19 N6 A B1237 3.850 91.553 59.915 1.00 57.91 N
ATOM 20 N1 A B1237 5.078 93.513 59.778 1.00 58.93 N
ATOM 21 C2 A B1237 6.267 94.130 59.837 1.00 57.28 C
ATOM 22 N3 A B1237 7.474 93.613 60.053 1.00 56.83 N
ATOM 23 C4 A B1237 7.393 92.283 60.220 1.00 56.56 C
ATOM 24 P U B1238 11.565 89.575 64.577 1.00 71.71 P
ATOM 25 OP1 U B1238 11.664 88.093 64.494 1.00 69.75 O
ATOM 26 OP2 U B1238 10.296 90.207 65.035 1.00 71.48 O
ATOM 27 O5' U B1238 12.770 90.094 65.489 1.00 76.08 O
TER
ATOM 2 P C A1236 5.082 85.151 57.593 1.00 52.84 P
ATOM 3 OP1 C A1236 4.294 85.175 56.332 1.00 52.14 O
ATOM 4 OP2 C A1236 5.481 83.840 58.178 1.00 52.26 O
ATOM 5 O5' C A1236 6.385 86.049 57.388 1.00 53.23 O
ATOM 6 C5' C A1236 7.527 85.559 56.650 1.00 53.58 C
ATOM 7 C4' C A1236 8.563 86.652 56.509 1.00 53.70 C
ATOM 8 O4' C A1236 8.052 87.707 55.657 1.00 54.77 O
ATOM 9 C3' C A1236 8.929 87.343 57.809 1.00 52.79 C
ATOM 10 O3' C A1236 9.942 86.601 58.471 1.00 51.85 O
ATOM 11 C2' C A1236 9.403 88.716 57.344 1.00 54.28 C
ATOM 12 O2' C A1236 10.741 88.728 56.882 1.00 54.47 O
ATOM 13 C1' C A1236 8.478 88.966 56.149 1.00 54.92 C
ATOM 14 N1 C A1236 7.287 89.792 56.428 1.00 55.43 N
ATOM 15 C2 C A1236 7.413 91.190 56.407 1.00 56.18 C
ATOM 16 O2 C A1236 8.534 91.694 56.215 1.00 58.27 O
ATOM 17 N3 C A1236 6.314 91.955 56.604 1.00 55.90 N
ATOM 18 C4 C A1236 5.131 91.380 56.831 1.00 55.99 C
ATOM 19 N4 C A1236 4.073 92.176 57.001 1.00 56.10 N
ATOM 20 C5 C A1236 4.979 89.963 56.890 1.00 55.88 C
ATOM 21 C6 C A1236 6.073 89.214 56.685 1.00 55.63 C
ATOM 22 P A A1237 9.951 86.516 60.073 1.00 51.94 P
ATOM 23 OP1 A A1237 11.114 85.671 60.449 1.00 50.76 O
ATOM 24 OP2 A A1237 8.590 86.148 60.548 1.00 53.01 O
ATOM 25 O5' A A1237 10.226 88.018 60.519 1.00 53.82 O
TER
ATOM 1 O3' C B1236 9.942 86.601 58.471 1.00 51.85 O
ATOM 2 P A B1237 9.951 86.516 60.073 1.00 51.94 P
ATOM 3 OP1 A B1237 11.114 85.671 60.449 1.00 50.76 O
ATOM 4 OP2 A B1237 8.590 86.148 60.548 1.00 53.01 O
ATOM 5 O5' A B1237 10.226 88.018 60.519 1.00 53.82 O
ATOM 6 C5' A B1237 11.516 88.627 60.327 1.00 56.73 C
ATOM 7 C4' A B1237 11.467 90.072 60.749 1.00 58.73 C
ATOM 8 O4' A B1237 10.569 90.786 59.865 1.00 58.46 O
ATOM 9 C3' A B1237 10.903 90.302 62.140 1.00 61.07 C
ATOM 10 O3' A B1237 11.923 90.162 63.121 1.00 67.22 O
ATOM 11 C2' A B1237 10.355 91.721 62.046 1.00 59.65 C
ATOM 12 O2' A B1237 11.355 92.709 62.199 1.00 60.50 O
ATOM 13 C1' A B1237 9.835 91.747 60.604 1.00 57.78 C
ATOM 14 N9 A B1237 8.422 91.412 60.472 1.00 56.36 N
ATOM 15 C8 A B1237 7.846 90.169 60.567 1.00 55.96 C
ATOM 16 N7 A B1237 6.548 90.174 60.399 1.00 55.79 N
ATOM 17 C5 A B1237 6.246 91.509 60.184 1.00 56.32 C
ATOM 18 C6 A B1237 5.035 92.172 59.957 1.00 58.15 C
ATOM 19 N6 A B1237 3.850 91.553 59.915 1.00 57.91 N
ATOM 20 N1 A B1237 5.078 93.513 59.778 1.00 58.93 N
ATOM 21 C2 A B1237 6.267 94.130 59.837 1.00 57.28 C
ATOM 22 N3 A B1237 7.474 93.613 60.053 1.00 56.83 N
ATOM 23 C4 A B1237 7.393 92.283 60.220 1.00 56.56 C
ATOM 24 P U B1238 11.565 89.575 64.577 1.00 71.71 P
ATOM 25 OP1 U B1238 11.664 88.093 64.494 1.00 69.75 O
ATOM 26 OP2 U B1238 10.296 90.207 65.035 1.00 71.48 O
ATOM 27 O5' U B1238 12.770 90.094 65.489 1.00 76.08 O
TER
Atoms:
C2: (7.413,91.190,56.407)
OP1: (4.294,85.175,56.332)
OP2: (5.481,83.840,58.178)
C4: (5.131,91.380,56.831)
O5': (6.385,86.049,57.388)
C3': (8.929,87.343,57.809)
C1': (8.478,88.966,56.149)
O4': (8.052,87.707,55.657)
C5': (7.527,85.559,56.650)
P: (5.082,85.151,57.593)
O2: (8.534,91.694,56.215)
C4': (8.563,86.652,56.509)
C2': (9.403,88.716,57.344)
O2': (10.741,88.728,56.882)
N1: (7.287,89.792,56.428)
N3: (6.314,91.955,56.604)
N4: (4.073,92.176,57.001)
C6: (6.073,89.214,56.685)
C5: (4.979,89.963,56.890)
O3': (9.942,86.601,58.471)
OP1: (4.294,85.175,56.332)
OP2: (5.481,83.840,58.178)
C4: (5.131,91.380,56.831)
O5': (6.385,86.049,57.388)
C3': (8.929,87.343,57.809)
C1': (8.478,88.966,56.149)
O4': (8.052,87.707,55.657)
C5': (7.527,85.559,56.650)
P: (5.082,85.151,57.593)
O2: (8.534,91.694,56.215)
C4': (8.563,86.652,56.509)
C2': (9.403,88.716,57.344)
O2': (10.741,88.728,56.882)
N1: (7.287,89.792,56.428)
N3: (6.314,91.955,56.604)
N4: (4.073,92.176,57.001)
C6: (6.073,89.214,56.685)
C5: (4.979,89.963,56.890)
O3': (9.942,86.601,58.471)
OP1: (11.114,85.671,60.449)
OP2: (8.590,86.148,60.548)
C3': (10.903,90.302,62.140)
C1': (9.835,91.747,60.604)
C5': (11.516,88.627,60.327)
O4': (10.569,90.786,59.865)
C8: (7.846,90.169,60.567)
O2': (11.355,92.709,62.199)
C6: (5.035,92.172,59.957)
C5: (6.246,91.509,60.184)
C4: (7.393,92.283,60.220)
P: (9.951,86.516,60.073)
C4': (11.467,90.072,60.749)
C2': (10.355,91.721,62.046)
C2: (6.267,94.130,59.837)
N1: (5.078,93.513,59.778)
N3: (7.474,93.613,60.053)
N6: (3.850,91.553,59.915)
N7: (6.548,90.174,60.399)
N9: (8.422,91.412,60.472)
O5': (10.226,88.018,60.519)
O3': (11.923,90.162,63.121)
OP2: (8.590,86.148,60.548)
C3': (10.903,90.302,62.140)
C1': (9.835,91.747,60.604)
C5': (11.516,88.627,60.327)
O4': (10.569,90.786,59.865)
C8: (7.846,90.169,60.567)
O2': (11.355,92.709,62.199)
C6: (5.035,92.172,59.957)
C5: (6.246,91.509,60.184)
C4: (7.393,92.283,60.220)
P: (9.951,86.516,60.073)
C4': (11.467,90.072,60.749)
C2': (10.355,91.721,62.046)
C2: (6.267,94.130,59.837)
N1: (5.078,93.513,59.778)
N3: (7.474,93.613,60.053)
N6: (3.850,91.553,59.915)
N7: (6.548,90.174,60.399)
N9: (8.422,91.412,60.472)
O5': (10.226,88.018,60.519)
O3': (11.923,90.162,63.121)
Image (generated by PyMOL):