Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NYI:B18:B19
Extra
PDB:
ATOM 1 O3' U A 17 34.284 4.219 28.038 1.00 49.36 O
ATOM 2 P C A 18 33.754 4.802 29.439 1.00 47.81 P
ATOM 3 OP1 C A 18 34.848 4.699 30.423 1.00 47.77 O
ATOM 4 OP2 C A 18 32.372 4.368 29.746 1.00 47.30 O
ATOM 5 O5' C A 18 33.571 6.331 29.062 1.00 47.82 O
ATOM 6 C5' C A 18 33.345 6.658 27.715 1.00 48.02 C
ATOM 7 C4' C A 18 33.660 8.115 27.486 1.00 48.31 C
ATOM 8 O4' C A 18 32.588 8.640 26.665 1.00 49.24 O
ATOM 9 C3' C A 18 33.674 8.945 28.760 1.00 48.42 C
ATOM 10 O3' C A 18 35.010 9.153 29.180 1.00 46.73 O
ATOM 11 C2' C A 18 33.036 10.244 28.299 1.00 49.15 C
ATOM 12 O2' C A 18 34.006 11.029 27.639 1.00 51.24 O
ATOM 13 C1' C A 18 31.997 9.764 27.299 1.00 48.76 C
ATOM 14 N1 C A 18 30.651 9.440 27.903 1.00 47.55 N
ATOM 15 C2 C A 18 29.722 10.468 27.980 1.00 47.01 C
ATOM 16 O2 C A 18 30.052 11.560 27.552 1.00 48.91 O
ATOM 17 N3 C A 18 28.495 10.251 28.501 1.00 46.69 N
ATOM 18 C4 C A 18 28.177 9.041 28.951 1.00 47.37 C
ATOM 19 N4 C A 18 26.952 8.880 29.457 1.00 47.06 N
ATOM 20 C5 C A 18 29.104 7.946 28.886 1.00 47.58 C
ATOM 21 C6 C A 18 30.316 8.192 28.366 1.00 47.45 C
ATOM 22 P A A 19 35.301 9.610 30.687 1.00 47.19 P
ATOM 23 OP1 A A 19 36.751 9.923 30.783 1.00 45.56 O
ATOM 24 OP2 A A 19 34.565 8.761 31.668 1.00 43.08 O
ATOM 25 O5' A A 19 34.544 11.013 30.705 1.00 47.78 O
TER
ATOM 1 O3' C B 18 35.010 9.153 29.180 1.00 46.73 O
ATOM 2 P A B 19 35.301 9.610 30.687 1.00 47.19 P
ATOM 3 OP1 A B 19 36.751 9.923 30.783 1.00 45.56 O
ATOM 4 OP2 A B 19 34.565 8.761 31.668 1.00 43.08 O
ATOM 5 O5' A B 19 34.544 11.013 30.705 1.00 47.78 O
ATOM 6 C5' A B 19 35.244 12.207 30.515 1.00 48.35 C
ATOM 7 C4' A B 19 34.219 13.296 30.680 1.00 50.20 C
ATOM 8 O4' A B 19 33.018 12.954 29.938 1.00 51.11 O
ATOM 9 C3' A B 19 33.693 13.507 32.089 1.00 49.53 C
ATOM 10 O3' A B 19 34.630 14.254 32.800 1.00 49.37 O
ATOM 11 C2' A B 19 32.515 14.378 31.711 1.00 49.28 C
ATOM 12 O2' A B 19 33.022 15.572 31.166 1.00 48.28 O
ATOM 13 C1' A B 19 31.910 13.540 30.594 1.00 49.48 C
ATOM 14 N9 A B 19 30.990 12.505 31.070 1.00 48.18 N
ATOM 15 C8 A B 19 31.246 11.216 31.441 1.00 46.89 C
ATOM 16 N7 A B 19 30.177 10.553 31.824 1.00 46.28 N
ATOM 17 C5 A B 19 29.151 11.465 31.700 1.00 46.45 C
ATOM 18 C6 A B 19 27.761 11.412 31.948 1.00 45.76 C
ATOM 19 N6 A B 19 27.128 10.342 32.391 1.00 44.56 N
ATOM 20 N1 A B 19 27.021 12.515 31.716 1.00 46.18 N
ATOM 21 C2 A B 19 27.644 13.613 31.262 1.00 46.96 C
ATOM 22 N3 A B 19 28.941 13.794 30.988 1.00 47.01 N
ATOM 23 C4 A B 19 29.642 12.674 31.235 1.00 47.39 C
ATOM 24 P C B 20 34.424 14.460 34.359 1.00 49.81 P
ATOM 25 OP1 C B 20 35.626 15.162 34.853 1.00 50.34 O
ATOM 26 OP2 C B 20 33.963 13.185 34.961 1.00 48.56 O
ATOM 27 O5' C B 20 33.220 15.503 34.458 1.00 48.50 O
TER
ATOM 2 P C A 18 33.754 4.802 29.439 1.00 47.81 P
ATOM 3 OP1 C A 18 34.848 4.699 30.423 1.00 47.77 O
ATOM 4 OP2 C A 18 32.372 4.368 29.746 1.00 47.30 O
ATOM 5 O5' C A 18 33.571 6.331 29.062 1.00 47.82 O
ATOM 6 C5' C A 18 33.345 6.658 27.715 1.00 48.02 C
ATOM 7 C4' C A 18 33.660 8.115 27.486 1.00 48.31 C
ATOM 8 O4' C A 18 32.588 8.640 26.665 1.00 49.24 O
ATOM 9 C3' C A 18 33.674 8.945 28.760 1.00 48.42 C
ATOM 10 O3' C A 18 35.010 9.153 29.180 1.00 46.73 O
ATOM 11 C2' C A 18 33.036 10.244 28.299 1.00 49.15 C
ATOM 12 O2' C A 18 34.006 11.029 27.639 1.00 51.24 O
ATOM 13 C1' C A 18 31.997 9.764 27.299 1.00 48.76 C
ATOM 14 N1 C A 18 30.651 9.440 27.903 1.00 47.55 N
ATOM 15 C2 C A 18 29.722 10.468 27.980 1.00 47.01 C
ATOM 16 O2 C A 18 30.052 11.560 27.552 1.00 48.91 O
ATOM 17 N3 C A 18 28.495 10.251 28.501 1.00 46.69 N
ATOM 18 C4 C A 18 28.177 9.041 28.951 1.00 47.37 C
ATOM 19 N4 C A 18 26.952 8.880 29.457 1.00 47.06 N
ATOM 20 C5 C A 18 29.104 7.946 28.886 1.00 47.58 C
ATOM 21 C6 C A 18 30.316 8.192 28.366 1.00 47.45 C
ATOM 22 P A A 19 35.301 9.610 30.687 1.00 47.19 P
ATOM 23 OP1 A A 19 36.751 9.923 30.783 1.00 45.56 O
ATOM 24 OP2 A A 19 34.565 8.761 31.668 1.00 43.08 O
ATOM 25 O5' A A 19 34.544 11.013 30.705 1.00 47.78 O
TER
ATOM 1 O3' C B 18 35.010 9.153 29.180 1.00 46.73 O
ATOM 2 P A B 19 35.301 9.610 30.687 1.00 47.19 P
ATOM 3 OP1 A B 19 36.751 9.923 30.783 1.00 45.56 O
ATOM 4 OP2 A B 19 34.565 8.761 31.668 1.00 43.08 O
ATOM 5 O5' A B 19 34.544 11.013 30.705 1.00 47.78 O
ATOM 6 C5' A B 19 35.244 12.207 30.515 1.00 48.35 C
ATOM 7 C4' A B 19 34.219 13.296 30.680 1.00 50.20 C
ATOM 8 O4' A B 19 33.018 12.954 29.938 1.00 51.11 O
ATOM 9 C3' A B 19 33.693 13.507 32.089 1.00 49.53 C
ATOM 10 O3' A B 19 34.630 14.254 32.800 1.00 49.37 O
ATOM 11 C2' A B 19 32.515 14.378 31.711 1.00 49.28 C
ATOM 12 O2' A B 19 33.022 15.572 31.166 1.00 48.28 O
ATOM 13 C1' A B 19 31.910 13.540 30.594 1.00 49.48 C
ATOM 14 N9 A B 19 30.990 12.505 31.070 1.00 48.18 N
ATOM 15 C8 A B 19 31.246 11.216 31.441 1.00 46.89 C
ATOM 16 N7 A B 19 30.177 10.553 31.824 1.00 46.28 N
ATOM 17 C5 A B 19 29.151 11.465 31.700 1.00 46.45 C
ATOM 18 C6 A B 19 27.761 11.412 31.948 1.00 45.76 C
ATOM 19 N6 A B 19 27.128 10.342 32.391 1.00 44.56 N
ATOM 20 N1 A B 19 27.021 12.515 31.716 1.00 46.18 N
ATOM 21 C2 A B 19 27.644 13.613 31.262 1.00 46.96 C
ATOM 22 N3 A B 19 28.941 13.794 30.988 1.00 47.01 N
ATOM 23 C4 A B 19 29.642 12.674 31.235 1.00 47.39 C
ATOM 24 P C B 20 34.424 14.460 34.359 1.00 49.81 P
ATOM 25 OP1 C B 20 35.626 15.162 34.853 1.00 50.34 O
ATOM 26 OP2 C B 20 33.963 13.185 34.961 1.00 48.56 O
ATOM 27 O5' C B 20 33.220 15.503 34.458 1.00 48.50 O
TER
Atoms:
C2: (29.722,10.468,27.980)
OP1: (34.848,4.699,30.423)
OP2: (32.372,4.368,29.746)
C4: (28.177,9.041,28.951)
O5': (33.571,6.331,29.062)
C3': (33.674,8.945,28.760)
C1': (31.997,9.764,27.299)
O4': (32.588,8.640,26.665)
C5': (33.345,6.658,27.715)
P: (33.754,4.802,29.439)
O2: (30.052,11.560,27.552)
C4': (33.660,8.115,27.486)
C2': (33.036,10.244,28.299)
O2': (34.006,11.029,27.639)
N1: (30.651,9.440,27.903)
N3: (28.495,10.251,28.501)
N4: (26.952,8.880,29.457)
C6: (30.316,8.192,28.366)
C5: (29.104,7.946,28.886)
O3': (35.010,9.153,29.180)
OP1: (34.848,4.699,30.423)
OP2: (32.372,4.368,29.746)
C4: (28.177,9.041,28.951)
O5': (33.571,6.331,29.062)
C3': (33.674,8.945,28.760)
C1': (31.997,9.764,27.299)
O4': (32.588,8.640,26.665)
C5': (33.345,6.658,27.715)
P: (33.754,4.802,29.439)
O2: (30.052,11.560,27.552)
C4': (33.660,8.115,27.486)
C2': (33.036,10.244,28.299)
O2': (34.006,11.029,27.639)
N1: (30.651,9.440,27.903)
N3: (28.495,10.251,28.501)
N4: (26.952,8.880,29.457)
C6: (30.316,8.192,28.366)
C5: (29.104,7.946,28.886)
O3': (35.010,9.153,29.180)
OP1: (36.751,9.923,30.783)
OP2: (34.565,8.761,31.668)
C3': (33.693,13.507,32.089)
C1': (31.910,13.540,30.594)
C5': (35.244,12.207,30.515)
O4': (33.018,12.954,29.938)
C8: (31.246,11.216,31.441)
O2': (33.022,15.572,31.166)
C6: (27.761,11.412,31.948)
C5: (29.151,11.465,31.700)
C4: (29.642,12.674,31.235)
P: (35.301,9.610,30.687)
C4': (34.219,13.296,30.680)
C2': (32.515,14.378,31.711)
C2: (27.644,13.613,31.262)
N1: (27.021,12.515,31.716)
N3: (28.941,13.794,30.988)
N6: (27.128,10.342,32.391)
N7: (30.177,10.553,31.824)
N9: (30.990,12.505,31.070)
O5': (34.544,11.013,30.705)
O3': (34.630,14.254,32.800)
OP2: (34.565,8.761,31.668)
C3': (33.693,13.507,32.089)
C1': (31.910,13.540,30.594)
C5': (35.244,12.207,30.515)
O4': (33.018,12.954,29.938)
C8: (31.246,11.216,31.441)
O2': (33.022,15.572,31.166)
C6: (27.761,11.412,31.948)
C5: (29.151,11.465,31.700)
C4: (29.642,12.674,31.235)
P: (35.301,9.610,30.687)
C4': (34.219,13.296,30.680)
C2': (32.515,14.378,31.711)
C2: (27.644,13.613,31.262)
N1: (27.021,12.515,31.716)
N3: (28.941,13.794,30.988)
N6: (27.128,10.342,32.391)
N7: (30.177,10.553,31.824)
N9: (30.990,12.505,31.070)
O5': (34.544,11.013,30.705)
O3': (34.630,14.254,32.800)
Image (generated by PyMOL):