Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0531:0530
Extra
PDB:
ATOM 1 O3' A A 530 9.373 115.963 96.455 1.00 54.51 O
ATOM 2 P G A 531 8.389 117.204 96.126 1.00 58.51 P
ATOM 3 OP1 G A 531 7.040 116.636 95.842 1.00 57.41 O
ATOM 4 OP2 G A 531 9.041 118.093 95.124 1.00 57.60 O
ATOM 5 O5' G A 531 8.289 118.020 97.490 1.00 54.97 O
ATOM 6 C5' G A 531 7.640 117.456 98.633 1.00 54.53 C
ATOM 7 C4' G A 531 7.841 118.346 99.824 1.00 54.20 C
ATOM 8 O4' G A 531 9.258 118.451 100.113 1.00 55.24 O
ATOM 9 C3' G A 531 7.426 119.784 99.615 1.00 55.04 C
ATOM 10 O3' G A 531 6.025 119.942 99.746 1.00 59.27 O
ATOM 11 C2' G A 531 8.222 120.500 100.694 1.00 53.78 C
ATOM 12 O2' G A 531 7.675 120.350 101.985 1.00 53.53 O
ATOM 13 C1' G A 531 9.549 119.745 100.621 1.00 53.31 C
ATOM 14 N9 G A 531 10.478 120.414 99.713 1.00 50.75 N
ATOM 15 C8 G A 531 10.718 120.120 98.392 1.00 50.93 C
ATOM 16 N7 G A 531 11.527 120.969 97.817 1.00 50.30 N
ATOM 17 C5 G A 531 11.856 121.863 98.825 1.00 48.93 C
ATOM 18 C6 G A 531 12.677 123.013 98.796 1.00 48.28 C
ATOM 19 O6 G A 531 13.278 123.507 97.833 1.00 49.42 O
ATOM 20 N1 G A 531 12.757 123.613 100.048 1.00 46.21 N
ATOM 21 C2 G A 531 12.124 123.166 101.178 1.00 45.15 C
ATOM 22 N2 G A 531 12.349 123.859 102.295 1.00 44.16 N
ATOM 23 N3 G A 531 11.335 122.111 101.212 1.00 45.86 N
ATOM 24 C4 G A 531 11.246 121.513 100.009 1.00 48.36 C
ATOM 25 P G A 532 5.344 121.338 99.336 1.00 62.14 P
ATOM 26 OP1 G A 532 3.870 121.126 99.348 1.00 62.71 O
ATOM 27 OP2 G A 532 5.999 121.889 98.118 1.00 60.59 O
ATOM 28 O5' G A 532 5.722 122.286 100.547 1.00 56.68 O
TER
ATOM 1 O3' C B 529 13.762 114.284 92.887 1.00 43.25 O
ATOM 2 P A B 530 12.465 115.252 92.899 1.00 43.25 P
ATOM 3 OP1 A B 530 11.556 114.734 91.849 1.00 46.15 O
ATOM 4 OP2 A B 530 12.891 116.674 92.866 1.00 39.08 O
ATOM 5 O5' A B 530 11.770 114.992 94.310 1.00 43.59 O
ATOM 6 C5' A B 530 12.530 115.126 95.502 1.00 45.72 C
ATOM 7 C4' A B 530 11.669 115.054 96.727 1.00 47.23 C
ATOM 8 O4' A B 530 12.599 115.137 97.839 1.00 47.85 O
ATOM 9 C3' A B 530 10.698 116.215 96.929 1.00 51.38 C
ATOM 10 O3' A B 530 9.373 115.963 96.455 1.00 54.51 O
ATOM 11 C2' A B 530 10.778 116.467 98.430 1.00 49.80 C
ATOM 12 O2' A B 530 10.026 115.543 99.192 1.00 50.20 O
ATOM 13 C1' A B 530 12.267 116.235 98.669 1.00 47.91 C
ATOM 14 N9 A B 530 13.098 117.385 98.282 1.00 44.66 N
ATOM 15 C8 A B 530 13.564 117.728 97.033 1.00 43.27 C
ATOM 16 N7 A B 530 14.250 118.846 97.012 1.00 41.60 N
ATOM 17 C5 A B 530 14.246 119.263 98.335 1.00 40.86 C
ATOM 18 C6 A B 530 14.793 120.382 98.970 1.00 39.29 C
ATOM 19 N6 A B 530 15.473 121.331 98.339 1.00 40.07 N
ATOM 20 N1 A B 530 14.614 120.499 100.299 1.00 38.95 N
ATOM 21 C2 A B 530 13.928 119.550 100.939 1.00 39.02 C
ATOM 22 N3 A B 530 13.360 118.456 100.456 1.00 41.13 N
ATOM 23 C4 A B 530 13.553 118.368 99.130 1.00 42.41 C
ATOM 24 P G B 531 8.389 117.204 96.126 1.00 58.51 P
ATOM 25 OP1 G B 531 7.040 116.636 95.842 1.00 57.41 O
ATOM 26 OP2 G B 531 9.041 118.093 95.124 1.00 57.60 O
ATOM 27 O5' G B 531 8.289 118.020 97.490 1.00 54.97 O
TER
ATOM 2 P G A 531 8.389 117.204 96.126 1.00 58.51 P
ATOM 3 OP1 G A 531 7.040 116.636 95.842 1.00 57.41 O
ATOM 4 OP2 G A 531 9.041 118.093 95.124 1.00 57.60 O
ATOM 5 O5' G A 531 8.289 118.020 97.490 1.00 54.97 O
ATOM 6 C5' G A 531 7.640 117.456 98.633 1.00 54.53 C
ATOM 7 C4' G A 531 7.841 118.346 99.824 1.00 54.20 C
ATOM 8 O4' G A 531 9.258 118.451 100.113 1.00 55.24 O
ATOM 9 C3' G A 531 7.426 119.784 99.615 1.00 55.04 C
ATOM 10 O3' G A 531 6.025 119.942 99.746 1.00 59.27 O
ATOM 11 C2' G A 531 8.222 120.500 100.694 1.00 53.78 C
ATOM 12 O2' G A 531 7.675 120.350 101.985 1.00 53.53 O
ATOM 13 C1' G A 531 9.549 119.745 100.621 1.00 53.31 C
ATOM 14 N9 G A 531 10.478 120.414 99.713 1.00 50.75 N
ATOM 15 C8 G A 531 10.718 120.120 98.392 1.00 50.93 C
ATOM 16 N7 G A 531 11.527 120.969 97.817 1.00 50.30 N
ATOM 17 C5 G A 531 11.856 121.863 98.825 1.00 48.93 C
ATOM 18 C6 G A 531 12.677 123.013 98.796 1.00 48.28 C
ATOM 19 O6 G A 531 13.278 123.507 97.833 1.00 49.42 O
ATOM 20 N1 G A 531 12.757 123.613 100.048 1.00 46.21 N
ATOM 21 C2 G A 531 12.124 123.166 101.178 1.00 45.15 C
ATOM 22 N2 G A 531 12.349 123.859 102.295 1.00 44.16 N
ATOM 23 N3 G A 531 11.335 122.111 101.212 1.00 45.86 N
ATOM 24 C4 G A 531 11.246 121.513 100.009 1.00 48.36 C
ATOM 25 P G A 532 5.344 121.338 99.336 1.00 62.14 P
ATOM 26 OP1 G A 532 3.870 121.126 99.348 1.00 62.71 O
ATOM 27 OP2 G A 532 5.999 121.889 98.118 1.00 60.59 O
ATOM 28 O5' G A 532 5.722 122.286 100.547 1.00 56.68 O
TER
ATOM 1 O3' C B 529 13.762 114.284 92.887 1.00 43.25 O
ATOM 2 P A B 530 12.465 115.252 92.899 1.00 43.25 P
ATOM 3 OP1 A B 530 11.556 114.734 91.849 1.00 46.15 O
ATOM 4 OP2 A B 530 12.891 116.674 92.866 1.00 39.08 O
ATOM 5 O5' A B 530 11.770 114.992 94.310 1.00 43.59 O
ATOM 6 C5' A B 530 12.530 115.126 95.502 1.00 45.72 C
ATOM 7 C4' A B 530 11.669 115.054 96.727 1.00 47.23 C
ATOM 8 O4' A B 530 12.599 115.137 97.839 1.00 47.85 O
ATOM 9 C3' A B 530 10.698 116.215 96.929 1.00 51.38 C
ATOM 10 O3' A B 530 9.373 115.963 96.455 1.00 54.51 O
ATOM 11 C2' A B 530 10.778 116.467 98.430 1.00 49.80 C
ATOM 12 O2' A B 530 10.026 115.543 99.192 1.00 50.20 O
ATOM 13 C1' A B 530 12.267 116.235 98.669 1.00 47.91 C
ATOM 14 N9 A B 530 13.098 117.385 98.282 1.00 44.66 N
ATOM 15 C8 A B 530 13.564 117.728 97.033 1.00 43.27 C
ATOM 16 N7 A B 530 14.250 118.846 97.012 1.00 41.60 N
ATOM 17 C5 A B 530 14.246 119.263 98.335 1.00 40.86 C
ATOM 18 C6 A B 530 14.793 120.382 98.970 1.00 39.29 C
ATOM 19 N6 A B 530 15.473 121.331 98.339 1.00 40.07 N
ATOM 20 N1 A B 530 14.614 120.499 100.299 1.00 38.95 N
ATOM 21 C2 A B 530 13.928 119.550 100.939 1.00 39.02 C
ATOM 22 N3 A B 530 13.360 118.456 100.456 1.00 41.13 N
ATOM 23 C4 A B 530 13.553 118.368 99.130 1.00 42.41 C
ATOM 24 P G B 531 8.389 117.204 96.126 1.00 58.51 P
ATOM 25 OP1 G B 531 7.040 116.636 95.842 1.00 57.41 O
ATOM 26 OP2 G B 531 9.041 118.093 95.124 1.00 57.60 O
ATOM 27 O5' G B 531 8.289 118.020 97.490 1.00 54.97 O
TER
Atoms:
OP1: (7.040,116.636,95.842)
OP2: (9.041,118.093,95.124)
C3': (7.426,119.784,99.615)
C1': (9.549,119.745,100.621)
C5': (7.640,117.456,98.633)
O6: (13.278,123.507,97.833)
O4': (9.258,118.451,100.113)
C8: (10.718,120.120,98.392)
C2: (12.124,123.166,101.178)
C6: (12.677,123.013,98.796)
C5: (11.856,121.863,98.825)
C4: (11.246,121.513,100.009)
P: (8.389,117.204,96.126)
C4': (7.841,118.346,99.824)
C2': (8.222,120.500,100.694)
O2': (7.675,120.350,101.985)
N1: (12.757,123.613,100.048)
N2: (12.349,123.859,102.295)
N3: (11.335,122.111,101.212)
N7: (11.527,120.969,97.817)
N9: (10.478,120.414,99.713)
O5': (8.289,118.020,97.490)
O3': (6.025,119.942,99.746)
OP2: (9.041,118.093,95.124)
C3': (7.426,119.784,99.615)
C1': (9.549,119.745,100.621)
C5': (7.640,117.456,98.633)
O6: (13.278,123.507,97.833)
O4': (9.258,118.451,100.113)
C8: (10.718,120.120,98.392)
C2: (12.124,123.166,101.178)
C6: (12.677,123.013,98.796)
C5: (11.856,121.863,98.825)
C4: (11.246,121.513,100.009)
P: (8.389,117.204,96.126)
C4': (7.841,118.346,99.824)
C2': (8.222,120.500,100.694)
O2': (7.675,120.350,101.985)
N1: (12.757,123.613,100.048)
N2: (12.349,123.859,102.295)
N3: (11.335,122.111,101.212)
N7: (11.527,120.969,97.817)
N9: (10.478,120.414,99.713)
O5': (8.289,118.020,97.490)
O3': (6.025,119.942,99.746)
OP1: (11.556,114.734,91.849)
OP2: (12.891,116.674,92.866)
C3': (10.698,116.215,96.929)
C1': (12.267,116.235,98.669)
C5': (12.530,115.126,95.502)
O4': (12.599,115.137,97.839)
C8: (13.564,117.728,97.033)
O2': (10.026,115.543,99.192)
C6: (14.793,120.382,98.970)
C5: (14.246,119.263,98.335)
C4: (13.553,118.368,99.130)
P: (12.465,115.252,92.899)
C4': (11.669,115.054,96.727)
C2': (10.778,116.467,98.430)
C2: (13.928,119.550,100.939)
N1: (14.614,120.499,100.299)
N3: (13.360,118.456,100.456)
N6: (15.473,121.331,98.339)
N7: (14.250,118.846,97.012)
N9: (13.098,117.385,98.282)
O5': (11.770,114.992,94.310)
O3': (9.373,115.963,96.455)
OP2: (12.891,116.674,92.866)
C3': (10.698,116.215,96.929)
C1': (12.267,116.235,98.669)
C5': (12.530,115.126,95.502)
O4': (12.599,115.137,97.839)
C8: (13.564,117.728,97.033)
O2': (10.026,115.543,99.192)
C6: (14.793,120.382,98.970)
C5: (14.246,119.263,98.335)
C4: (13.553,118.368,99.130)
P: (12.465,115.252,92.899)
C4': (11.669,115.054,96.727)
C2': (10.778,116.467,98.430)
C2: (13.928,119.550,100.939)
N1: (14.614,120.499,100.299)
N3: (13.360,118.456,100.456)
N6: (15.473,121.331,98.339)
N7: (14.250,118.846,97.012)
N9: (13.098,117.385,98.282)
O5': (11.770,114.992,94.310)
O3': (9.373,115.963,96.455)
Image (generated by PyMOL):