Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:941:943
Extra
PDB:
ATOM 1 O3' C A 40 94.023 23.219 92.153 1.00 87.21 O
ATOM 2 P C A 41 92.849 22.146 91.920 1.00 88.30 P
ATOM 3 OP1 C A 41 93.327 21.117 90.959 1.00 88.12 O
ATOM 4 OP2 C A 41 91.605 22.904 91.631 1.00 88.94 O
ATOM 5 O5' C A 41 92.703 21.434 93.335 1.00 87.59 O
ATOM 6 C5' C A 41 91.539 20.675 93.651 1.00 86.36 C
ATOM 7 C4' C A 41 91.423 20.491 95.140 1.00 86.33 C
ATOM 8 O4' C A 41 91.578 21.760 95.820 1.00 87.27 O
ATOM 9 C3' C A 41 90.057 19.996 95.558 1.00 86.50 C
ATOM 10 O3' C A 41 90.004 18.591 95.436 1.00 86.21 O
ATOM 11 C2' C A 41 89.941 20.489 96.990 1.00 87.74 C
ATOM 12 O2' C A 41 90.625 19.659 97.907 1.00 89.70 O
ATOM 13 C1' C A 41 90.654 21.843 96.897 1.00 88.54 C
ATOM 14 N1 C A 41 89.782 23.025 96.676 1.00 90.05 N
ATOM 15 C2 C A 41 88.715 23.288 97.572 1.00 90.57 C
ATOM 16 O2 C A 41 88.493 22.503 98.507 1.00 91.06 O
ATOM 17 N3 C A 41 87.958 24.396 97.385 1.00 90.71 N
ATOM 18 C4 C A 41 88.218 25.220 96.363 1.00 90.97 C
ATOM 19 N4 C A 41 87.463 26.316 96.232 1.00 91.91 N
ATOM 20 C5 C A 41 89.269 24.964 95.433 1.00 89.92 C
ATOM 21 C6 C A 41 90.015 23.871 95.624 1.00 89.96 C
ATOM 22 P G A 42 89.245 17.946 94.186 1.00 86.24 P
ATOM 23 OP1 G A 42 89.036 16.502 94.458 1.00 87.55 O
ATOM 24 OP2 G A 42 89.945 18.361 92.941 1.00 85.20 O
ATOM 25 O5' G A 42 87.828 18.662 94.248 1.00 85.63 O
TER
ATOM 1 O3' G B 42 84.392 17.396 96.037 1.00 81.56 O
ATOM 2 P A B 43 84.499 17.101 97.615 1.00 80.13 P
ATOM 3 OP1 A B 43 85.925 17.114 98.048 1.00 80.79 O
ATOM 4 OP2 A B 43 83.658 15.908 97.878 1.00 78.96 O
ATOM 5 O5' A B 43 83.778 18.364 98.260 1.00 80.78 O
ATOM 6 C5' A B 43 83.540 18.460 99.677 1.00 81.10 C
ATOM 7 C4' A B 43 83.210 19.890 100.043 1.00 81.19 C
ATOM 8 O4' A B 43 84.392 20.714 99.862 1.00 81.46 O
ATOM 9 C3' A B 43 82.163 20.544 99.155 1.00 80.59 C
ATOM 10 O3' A B 43 80.839 20.228 99.549 1.00 79.03 O
ATOM 11 C2' A B 43 82.502 22.022 99.275 1.00 81.32 C
ATOM 12 O2' A B 43 82.016 22.613 100.467 1.00 81.05 O
ATOM 13 C1' A B 43 84.032 21.963 99.293 1.00 81.42 C
ATOM 14 N9 A B 43 84.621 22.031 97.951 1.00 81.55 N
ATOM 15 C8 A B 43 85.151 21.003 97.205 1.00 80.93 C
ATOM 16 N7 A B 43 85.581 21.372 96.024 1.00 81.03 N
ATOM 17 C5 A B 43 85.321 22.736 95.987 1.00 82.32 C
ATOM 18 C6 A B 43 85.529 23.713 94.996 1.00 83.27 C
ATOM 19 N6 A B 43 86.076 23.456 93.804 1.00 83.53 N
ATOM 20 N1 A B 43 85.148 24.980 95.273 1.00 83.66 N
ATOM 21 C2 A B 43 84.599 25.237 96.470 1.00 83.63 C
ATOM 22 N3 A B 43 84.353 24.406 97.481 1.00 82.68 N
ATOM 23 C4 A B 43 84.739 23.156 97.171 1.00 82.09 C
ATOM 24 P A B 44 79.741 19.915 98.425 1.00 78.42 P
ATOM 25 OP1 A B 44 78.444 19.739 99.125 1.00 78.40 O
ATOM 26 OP2 A B 44 80.249 18.837 97.532 1.00 77.11 O
ATOM 27 O5' A B 44 79.679 21.265 97.584 1.00 79.19 O
TER
ATOM 2 P C A 41 92.849 22.146 91.920 1.00 88.30 P
ATOM 3 OP1 C A 41 93.327 21.117 90.959 1.00 88.12 O
ATOM 4 OP2 C A 41 91.605 22.904 91.631 1.00 88.94 O
ATOM 5 O5' C A 41 92.703 21.434 93.335 1.00 87.59 O
ATOM 6 C5' C A 41 91.539 20.675 93.651 1.00 86.36 C
ATOM 7 C4' C A 41 91.423 20.491 95.140 1.00 86.33 C
ATOM 8 O4' C A 41 91.578 21.760 95.820 1.00 87.27 O
ATOM 9 C3' C A 41 90.057 19.996 95.558 1.00 86.50 C
ATOM 10 O3' C A 41 90.004 18.591 95.436 1.00 86.21 O
ATOM 11 C2' C A 41 89.941 20.489 96.990 1.00 87.74 C
ATOM 12 O2' C A 41 90.625 19.659 97.907 1.00 89.70 O
ATOM 13 C1' C A 41 90.654 21.843 96.897 1.00 88.54 C
ATOM 14 N1 C A 41 89.782 23.025 96.676 1.00 90.05 N
ATOM 15 C2 C A 41 88.715 23.288 97.572 1.00 90.57 C
ATOM 16 O2 C A 41 88.493 22.503 98.507 1.00 91.06 O
ATOM 17 N3 C A 41 87.958 24.396 97.385 1.00 90.71 N
ATOM 18 C4 C A 41 88.218 25.220 96.363 1.00 90.97 C
ATOM 19 N4 C A 41 87.463 26.316 96.232 1.00 91.91 N
ATOM 20 C5 C A 41 89.269 24.964 95.433 1.00 89.92 C
ATOM 21 C6 C A 41 90.015 23.871 95.624 1.00 89.96 C
ATOM 22 P G A 42 89.245 17.946 94.186 1.00 86.24 P
ATOM 23 OP1 G A 42 89.036 16.502 94.458 1.00 87.55 O
ATOM 24 OP2 G A 42 89.945 18.361 92.941 1.00 85.20 O
ATOM 25 O5' G A 42 87.828 18.662 94.248 1.00 85.63 O
TER
ATOM 1 O3' G B 42 84.392 17.396 96.037 1.00 81.56 O
ATOM 2 P A B 43 84.499 17.101 97.615 1.00 80.13 P
ATOM 3 OP1 A B 43 85.925 17.114 98.048 1.00 80.79 O
ATOM 4 OP2 A B 43 83.658 15.908 97.878 1.00 78.96 O
ATOM 5 O5' A B 43 83.778 18.364 98.260 1.00 80.78 O
ATOM 6 C5' A B 43 83.540 18.460 99.677 1.00 81.10 C
ATOM 7 C4' A B 43 83.210 19.890 100.043 1.00 81.19 C
ATOM 8 O4' A B 43 84.392 20.714 99.862 1.00 81.46 O
ATOM 9 C3' A B 43 82.163 20.544 99.155 1.00 80.59 C
ATOM 10 O3' A B 43 80.839 20.228 99.549 1.00 79.03 O
ATOM 11 C2' A B 43 82.502 22.022 99.275 1.00 81.32 C
ATOM 12 O2' A B 43 82.016 22.613 100.467 1.00 81.05 O
ATOM 13 C1' A B 43 84.032 21.963 99.293 1.00 81.42 C
ATOM 14 N9 A B 43 84.621 22.031 97.951 1.00 81.55 N
ATOM 15 C8 A B 43 85.151 21.003 97.205 1.00 80.93 C
ATOM 16 N7 A B 43 85.581 21.372 96.024 1.00 81.03 N
ATOM 17 C5 A B 43 85.321 22.736 95.987 1.00 82.32 C
ATOM 18 C6 A B 43 85.529 23.713 94.996 1.00 83.27 C
ATOM 19 N6 A B 43 86.076 23.456 93.804 1.00 83.53 N
ATOM 20 N1 A B 43 85.148 24.980 95.273 1.00 83.66 N
ATOM 21 C2 A B 43 84.599 25.237 96.470 1.00 83.63 C
ATOM 22 N3 A B 43 84.353 24.406 97.481 1.00 82.68 N
ATOM 23 C4 A B 43 84.739 23.156 97.171 1.00 82.09 C
ATOM 24 P A B 44 79.741 19.915 98.425 1.00 78.42 P
ATOM 25 OP1 A B 44 78.444 19.739 99.125 1.00 78.40 O
ATOM 26 OP2 A B 44 80.249 18.837 97.532 1.00 77.11 O
ATOM 27 O5' A B 44 79.679 21.265 97.584 1.00 79.19 O
TER
Atoms:
C2: (88.715,23.288,97.572)
OP1: (93.327,21.117,90.959)
OP2: (91.605,22.904,91.631)
C4: (88.218,25.220,96.363)
O5': (92.703,21.434,93.335)
C3': (90.057,19.996,95.558)
C1': (90.654,21.843,96.897)
O4': (91.578,21.760,95.820)
C5': (91.539,20.675,93.651)
P: (92.849,22.146,91.920)
O2: (88.493,22.503,98.507)
C4': (91.423,20.491,95.140)
C2': (89.941,20.489,96.990)
O2': (90.625,19.659,97.907)
N1: (89.782,23.025,96.676)
N3: (87.958,24.396,97.385)
N4: (87.463,26.316,96.232)
C6: (90.015,23.871,95.624)
C5: (89.269,24.964,95.433)
O3': (90.004,18.591,95.436)
OP1: (93.327,21.117,90.959)
OP2: (91.605,22.904,91.631)
C4: (88.218,25.220,96.363)
O5': (92.703,21.434,93.335)
C3': (90.057,19.996,95.558)
C1': (90.654,21.843,96.897)
O4': (91.578,21.760,95.820)
C5': (91.539,20.675,93.651)
P: (92.849,22.146,91.920)
O2: (88.493,22.503,98.507)
C4': (91.423,20.491,95.140)
C2': (89.941,20.489,96.990)
O2': (90.625,19.659,97.907)
N1: (89.782,23.025,96.676)
N3: (87.958,24.396,97.385)
N4: (87.463,26.316,96.232)
C6: (90.015,23.871,95.624)
C5: (89.269,24.964,95.433)
O3': (90.004,18.591,95.436)
OP1: (85.925,17.114,98.048)
OP2: (83.658,15.908,97.878)
C3': (82.163,20.544,99.155)
C1': (84.032,21.963,99.293)
C5': (83.540,18.460,99.677)
O4': (84.392,20.714,99.862)
C8: (85.151,21.003,97.205)
O2': (82.016,22.613,100.467)
C6: (85.529,23.713,94.996)
C5: (85.321,22.736,95.987)
C4: (84.739,23.156,97.171)
P: (84.499,17.101,97.615)
C4': (83.210,19.890,100.043)
C2': (82.502,22.022,99.275)
C2: (84.599,25.237,96.470)
N1: (85.148,24.980,95.273)
N3: (84.353,24.406,97.481)
N6: (86.076,23.456,93.804)
N7: (85.581,21.372,96.024)
N9: (84.621,22.031,97.951)
O5': (83.778,18.364,98.260)
O3': (80.839,20.228,99.549)
OP2: (83.658,15.908,97.878)
C3': (82.163,20.544,99.155)
C1': (84.032,21.963,99.293)
C5': (83.540,18.460,99.677)
O4': (84.392,20.714,99.862)
C8: (85.151,21.003,97.205)
O2': (82.016,22.613,100.467)
C6: (85.529,23.713,94.996)
C5: (85.321,22.736,95.987)
C4: (84.739,23.156,97.171)
P: (84.499,17.101,97.615)
C4': (83.210,19.890,100.043)
C2': (82.502,22.022,99.275)
C2: (84.599,25.237,96.470)
N1: (85.148,24.980,95.273)
N3: (84.353,24.406,97.481)
N6: (86.076,23.456,93.804)
N7: (85.581,21.372,96.024)
N9: (84.621,22.031,97.951)
O5': (83.778,18.364,98.260)
O3': (80.839,20.228,99.549)
Image (generated by PyMOL):