Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:99:98
Extra
PDB:
ATOM 1 O3' C A 8 51.692 42.338 98.687 1.00 44.45 O
ATOM 2 P C A 9 52.996 43.282 98.570 1.00 46.32 P
ATOM 3 OP1 C A 9 52.582 44.627 99.052 1.00 45.36 O
ATOM 4 OP2 C A 9 53.554 43.129 97.205 1.00 47.15 O
ATOM 5 O5' C A 9 54.080 42.692 99.582 1.00 42.80 O
ATOM 6 C5' C A 9 53.814 42.605 100.986 1.00 41.34 C
ATOM 7 C4' C A 9 54.765 41.627 101.654 1.00 42.12 C
ATOM 8 O4' C A 9 54.805 40.386 100.886 1.00 42.15 O
ATOM 9 C3' C A 9 56.220 42.056 101.836 1.00 40.68 C
ATOM 10 O3' C A 9 56.702 41.500 103.049 1.00 43.44 O
ATOM 11 C2' C A 9 56.925 41.356 100.684 1.00 40.82 C
ATOM 12 O2' C A 9 58.281 41.075 100.953 1.00 40.78 O
ATOM 13 C1' C A 9 56.148 40.048 100.612 1.00 41.58 C
ATOM 14 N1 C A 9 56.220 39.401 99.295 1.00 42.37 N
ATOM 15 C2 C A 9 56.955 38.210 99.162 1.00 42.54 C
ATOM 16 O2 C A 9 57.520 37.724 100.163 1.00 40.91 O
ATOM 17 N3 C A 9 57.035 37.622 97.948 1.00 41.51 N
ATOM 18 C4 C A 9 56.427 38.175 96.897 1.00 40.63 C
ATOM 19 N4 C A 9 56.546 37.570 95.714 1.00 41.38 N
ATOM 20 C5 C A 9 55.671 39.375 97.008 1.00 42.31 C
ATOM 21 C6 C A 9 55.593 39.948 98.212 1.00 41.97 C
ATOM 22 P A A 10 56.918 42.441 104.333 1.00 45.91 P
ATOM 23 OP1 A A 10 55.675 43.218 104.572 1.00 43.44 O
ATOM 24 OP2 A A 10 58.209 43.147 104.147 1.00 46.39 O
ATOM 25 O5' A A 10 57.110 41.415 105.534 1.00 46.88 O
TER
ATOM 1 O3' G B 7 52.076 38.668 93.577 1.00 48.00 O
ATOM 2 P C B 8 53.056 39.802 94.160 1.00 48.41 P
ATOM 3 OP1 C B 8 52.769 41.029 93.382 1.00 50.51 O
ATOM 4 OP2 C B 8 54.442 39.274 94.207 1.00 46.76 O
ATOM 5 O5' C B 8 52.541 40.026 95.654 1.00 47.15 O
ATOM 6 C5' C B 8 51.280 40.677 95.907 1.00 44.91 C
ATOM 7 C4' C B 8 50.850 40.470 97.342 1.00 45.95 C
ATOM 8 O4' C B 8 50.720 39.046 97.608 1.00 46.77 O
ATOM 9 C3' C B 8 51.793 40.937 98.441 1.00 45.41 C
ATOM 10 O3' C B 8 51.692 42.338 98.687 1.00 44.45 O
ATOM 11 C2' C B 8 51.268 40.150 99.638 1.00 45.77 C
ATOM 12 O2' C B 8 50.103 40.711 100.205 1.00 46.31 O
ATOM 13 C1' C B 8 50.901 38.811 98.993 1.00 45.42 C
ATOM 14 N1 C B 8 51.951 37.795 99.190 1.00 47.21 N
ATOM 15 C2 C B 8 52.021 37.144 100.433 1.00 48.28 C
ATOM 16 O2 C B 8 51.152 37.385 101.290 1.00 48.20 O
ATOM 17 N3 C B 8 53.027 36.269 100.666 1.00 47.52 N
ATOM 18 C4 C B 8 53.926 36.019 99.712 1.00 48.18 C
ATOM 19 N4 C B 8 54.919 35.171 99.997 1.00 48.41 N
ATOM 20 C5 C B 8 53.853 36.631 98.424 1.00 47.05 C
ATOM 21 C6 C B 8 52.859 37.505 98.208 1.00 47.11 C
ATOM 22 P C B 9 52.996 43.282 98.570 1.00 46.32 P
ATOM 23 OP1 C B 9 52.582 44.627 99.052 1.00 45.36 O
ATOM 24 OP2 C B 9 53.554 43.129 97.205 1.00 47.15 O
ATOM 25 O5' C B 9 54.080 42.692 99.582 1.00 42.80 O
TER
ATOM 2 P C A 9 52.996 43.282 98.570 1.00 46.32 P
ATOM 3 OP1 C A 9 52.582 44.627 99.052 1.00 45.36 O
ATOM 4 OP2 C A 9 53.554 43.129 97.205 1.00 47.15 O
ATOM 5 O5' C A 9 54.080 42.692 99.582 1.00 42.80 O
ATOM 6 C5' C A 9 53.814 42.605 100.986 1.00 41.34 C
ATOM 7 C4' C A 9 54.765 41.627 101.654 1.00 42.12 C
ATOM 8 O4' C A 9 54.805 40.386 100.886 1.00 42.15 O
ATOM 9 C3' C A 9 56.220 42.056 101.836 1.00 40.68 C
ATOM 10 O3' C A 9 56.702 41.500 103.049 1.00 43.44 O
ATOM 11 C2' C A 9 56.925 41.356 100.684 1.00 40.82 C
ATOM 12 O2' C A 9 58.281 41.075 100.953 1.00 40.78 O
ATOM 13 C1' C A 9 56.148 40.048 100.612 1.00 41.58 C
ATOM 14 N1 C A 9 56.220 39.401 99.295 1.00 42.37 N
ATOM 15 C2 C A 9 56.955 38.210 99.162 1.00 42.54 C
ATOM 16 O2 C A 9 57.520 37.724 100.163 1.00 40.91 O
ATOM 17 N3 C A 9 57.035 37.622 97.948 1.00 41.51 N
ATOM 18 C4 C A 9 56.427 38.175 96.897 1.00 40.63 C
ATOM 19 N4 C A 9 56.546 37.570 95.714 1.00 41.38 N
ATOM 20 C5 C A 9 55.671 39.375 97.008 1.00 42.31 C
ATOM 21 C6 C A 9 55.593 39.948 98.212 1.00 41.97 C
ATOM 22 P A A 10 56.918 42.441 104.333 1.00 45.91 P
ATOM 23 OP1 A A 10 55.675 43.218 104.572 1.00 43.44 O
ATOM 24 OP2 A A 10 58.209 43.147 104.147 1.00 46.39 O
ATOM 25 O5' A A 10 57.110 41.415 105.534 1.00 46.88 O
TER
ATOM 1 O3' G B 7 52.076 38.668 93.577 1.00 48.00 O
ATOM 2 P C B 8 53.056 39.802 94.160 1.00 48.41 P
ATOM 3 OP1 C B 8 52.769 41.029 93.382 1.00 50.51 O
ATOM 4 OP2 C B 8 54.442 39.274 94.207 1.00 46.76 O
ATOM 5 O5' C B 8 52.541 40.026 95.654 1.00 47.15 O
ATOM 6 C5' C B 8 51.280 40.677 95.907 1.00 44.91 C
ATOM 7 C4' C B 8 50.850 40.470 97.342 1.00 45.95 C
ATOM 8 O4' C B 8 50.720 39.046 97.608 1.00 46.77 O
ATOM 9 C3' C B 8 51.793 40.937 98.441 1.00 45.41 C
ATOM 10 O3' C B 8 51.692 42.338 98.687 1.00 44.45 O
ATOM 11 C2' C B 8 51.268 40.150 99.638 1.00 45.77 C
ATOM 12 O2' C B 8 50.103 40.711 100.205 1.00 46.31 O
ATOM 13 C1' C B 8 50.901 38.811 98.993 1.00 45.42 C
ATOM 14 N1 C B 8 51.951 37.795 99.190 1.00 47.21 N
ATOM 15 C2 C B 8 52.021 37.144 100.433 1.00 48.28 C
ATOM 16 O2 C B 8 51.152 37.385 101.290 1.00 48.20 O
ATOM 17 N3 C B 8 53.027 36.269 100.666 1.00 47.52 N
ATOM 18 C4 C B 8 53.926 36.019 99.712 1.00 48.18 C
ATOM 19 N4 C B 8 54.919 35.171 99.997 1.00 48.41 N
ATOM 20 C5 C B 8 53.853 36.631 98.424 1.00 47.05 C
ATOM 21 C6 C B 8 52.859 37.505 98.208 1.00 47.11 C
ATOM 22 P C B 9 52.996 43.282 98.570 1.00 46.32 P
ATOM 23 OP1 C B 9 52.582 44.627 99.052 1.00 45.36 O
ATOM 24 OP2 C B 9 53.554 43.129 97.205 1.00 47.15 O
ATOM 25 O5' C B 9 54.080 42.692 99.582 1.00 42.80 O
TER
Atoms:
C2: (56.955,38.210,99.162)
OP1: (52.582,44.627,99.052)
OP2: (53.554,43.129,97.205)
C4: (56.427,38.175,96.897)
O5': (54.080,42.692,99.582)
C3': (56.220,42.056,101.836)
C1': (56.148,40.048,100.612)
O4': (54.805,40.386,100.886)
C5': (53.814,42.605,100.986)
P: (52.996,43.282,98.570)
O2: (57.520,37.724,100.163)
C4': (54.765,41.627,101.654)
C2': (56.925,41.356,100.684)
O2': (58.281,41.075,100.953)
N1: (56.220,39.401,99.295)
N3: (57.035,37.622,97.948)
N4: (56.546,37.570,95.714)
C6: (55.593,39.948,98.212)
C5: (55.671,39.375,97.008)
O3': (56.702,41.500,103.049)
OP1: (52.582,44.627,99.052)
OP2: (53.554,43.129,97.205)
C4: (56.427,38.175,96.897)
O5': (54.080,42.692,99.582)
C3': (56.220,42.056,101.836)
C1': (56.148,40.048,100.612)
O4': (54.805,40.386,100.886)
C5': (53.814,42.605,100.986)
P: (52.996,43.282,98.570)
O2: (57.520,37.724,100.163)
C4': (54.765,41.627,101.654)
C2': (56.925,41.356,100.684)
O2': (58.281,41.075,100.953)
N1: (56.220,39.401,99.295)
N3: (57.035,37.622,97.948)
N4: (56.546,37.570,95.714)
C6: (55.593,39.948,98.212)
C5: (55.671,39.375,97.008)
O3': (56.702,41.500,103.049)
C2: (52.021,37.144,100.433)
OP1: (52.769,41.029,93.382)
OP2: (54.442,39.274,94.207)
C4: (53.926,36.019,99.712)
O5': (52.541,40.026,95.654)
C3': (51.793,40.937,98.441)
C1': (50.901,38.811,98.993)
O4': (50.720,39.046,97.608)
C5': (51.280,40.677,95.907)
P: (53.056,39.802,94.160)
O2: (51.152,37.385,101.290)
C4': (50.850,40.470,97.342)
C2': (51.268,40.150,99.638)
O2': (50.103,40.711,100.205)
N1: (51.951,37.795,99.190)
N3: (53.027,36.269,100.666)
N4: (54.919,35.171,99.997)
C6: (52.859,37.505,98.208)
C5: (53.853,36.631,98.424)
O3': (51.692,42.338,98.687)
OP1: (52.769,41.029,93.382)
OP2: (54.442,39.274,94.207)
C4: (53.926,36.019,99.712)
O5': (52.541,40.026,95.654)
C3': (51.793,40.937,98.441)
C1': (50.901,38.811,98.993)
O4': (50.720,39.046,97.608)
C5': (51.280,40.677,95.907)
P: (53.056,39.802,94.160)
O2: (51.152,37.385,101.290)
C4': (50.850,40.470,97.342)
C2': (51.268,40.150,99.638)
O2': (50.103,40.711,100.205)
N1: (51.951,37.795,99.190)
N3: (53.027,36.269,100.666)
N4: (54.919,35.171,99.997)
C6: (52.859,37.505,98.208)
C5: (53.853,36.631,98.424)
O3': (51.692,42.338,98.687)
Image (generated by PyMOL):