Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A89:A88
Extra
PDB:
ATOM 1 O3' A A 88 -2.514 23.911 10.295 1.00 27.36 O
ATOM 2 P G A 89 -2.867 25.470 10.327 1.00 27.54 P
ATOM 3 OP1 G A 89 -4.318 25.574 10.076 1.00 27.83 O
ATOM 4 OP2 G A 89 -1.914 26.189 9.448 1.00 27.69 O
ATOM 5 O5' G A 89 -2.570 25.905 11.836 1.00 27.35 O
ATOM 6 C5' G A 89 -3.470 25.485 12.851 1.00 28.49 C
ATOM 7 C4' G A 89 -2.975 25.857 14.237 1.00 29.46 C
ATOM 8 O4' G A 89 -1.661 25.274 14.454 1.00 30.09 O
ATOM 9 C3' G A 89 -2.779 27.347 14.501 1.00 29.33 C
ATOM 10 O3' G A 89 -4.002 27.964 14.862 1.00 29.67 O
ATOM 11 C2' G A 89 -1.816 27.285 15.675 1.00 29.69 C
ATOM 12 O2' G A 89 -2.462 26.957 16.894 1.00 29.82 O
ATOM 13 C1' G A 89 -0.866 26.177 15.204 1.00 29.29 C
ATOM 14 N9 G A 89 0.184 26.730 14.350 1.00 29.13 N
ATOM 15 C8 G A 89 0.302 26.631 12.983 1.00 29.04 C
ATOM 16 N7 G A 89 1.348 27.248 12.506 1.00 29.04 N
ATOM 17 C5 G A 89 1.959 27.809 13.621 1.00 28.44 C
ATOM 18 C6 G A 89 3.133 28.599 13.726 1.00 28.04 C
ATOM 19 O6 G A 89 3.885 28.974 12.810 1.00 27.52 O
ATOM 20 N1 G A 89 3.405 28.953 15.054 1.00 27.80 N
ATOM 21 C2 G A 89 2.631 28.584 16.140 1.00 28.78 C
ATOM 22 N2 G A 89 3.020 29.005 17.354 1.00 28.66 N
ATOM 23 N3 G A 89 1.530 27.845 16.049 1.00 28.98 N
ATOM 24 C4 G A 89 1.253 27.495 14.764 1.00 29.11 C
ATOM 25 P A A 90 -4.376 29.445 14.382 1.00 29.58 P
ATOM 26 OP1 A A 90 -5.813 29.636 14.675 1.00 29.41 O
ATOM 27 OP2 A A 90 -3.884 29.659 12.996 1.00 29.14 O
ATOM 28 O5' A A 90 -3.525 30.369 15.373 1.00 29.72 O
TER
ATOM 1 O3' C B 87 0.950 21.383 5.749 1.00 25.81 O
ATOM 2 P A B 88 0.311 22.829 5.958 1.00 25.62 P
ATOM 3 OP1 A B 88 -0.970 22.836 5.221 1.00 26.25 O
ATOM 4 OP2 A B 88 1.347 23.840 5.654 1.00 25.89 O
ATOM 5 O5' A B 88 0.035 22.916 7.539 1.00 26.55 O
ATOM 6 C5' A B 88 -0.994 22.139 8.122 1.00 27.23 C
ATOM 7 C4' A B 88 -0.949 22.164 9.637 1.00 27.53 C
ATOM 8 O4' A B 88 0.354 21.756 10.124 1.00 27.69 O
ATOM 9 C3' A B 88 -1.152 23.518 10.295 1.00 27.62 C
ATOM 10 O3' A B 88 -2.514 23.911 10.295 1.00 27.36 O
ATOM 11 C2' A B 88 -0.630 23.208 11.692 1.00 27.27 C
ATOM 12 O2' A B 88 -1.527 22.409 12.435 1.00 27.12 O
ATOM 13 C1' A B 88 0.638 22.436 11.335 1.00 26.68 C
ATOM 14 N9 A B 88 1.773 23.332 11.119 1.00 26.14 N
ATOM 15 C8 A B 88 2.308 23.722 9.919 1.00 25.94 C
ATOM 16 N7 A B 88 3.320 24.548 10.029 1.00 26.31 N
ATOM 17 C5 A B 88 3.459 24.712 11.397 1.00 26.33 C
ATOM 18 C6 A B 88 4.363 25.470 12.177 1.00 26.70 C
ATOM 19 N6 A B 88 5.324 26.225 11.636 1.00 26.36 N
ATOM 20 N1 A B 88 4.242 25.421 13.528 1.00 26.30 N
ATOM 21 C2 A B 88 3.273 24.653 14.052 1.00 26.30 C
ATOM 22 N3 A B 88 2.366 23.897 13.420 1.00 26.02 N
ATOM 23 C4 A B 88 2.514 23.972 12.084 1.00 26.19 C
ATOM 24 P G B 89 -2.867 25.470 10.327 1.00 27.54 P
ATOM 25 OP1 G B 89 -4.318 25.574 10.076 1.00 27.83 O
ATOM 26 OP2 G B 89 -1.914 26.189 9.448 1.00 27.69 O
ATOM 27 O5' G B 89 -2.570 25.905 11.836 1.00 27.35 O
TER
ATOM 2 P G A 89 -2.867 25.470 10.327 1.00 27.54 P
ATOM 3 OP1 G A 89 -4.318 25.574 10.076 1.00 27.83 O
ATOM 4 OP2 G A 89 -1.914 26.189 9.448 1.00 27.69 O
ATOM 5 O5' G A 89 -2.570 25.905 11.836 1.00 27.35 O
ATOM 6 C5' G A 89 -3.470 25.485 12.851 1.00 28.49 C
ATOM 7 C4' G A 89 -2.975 25.857 14.237 1.00 29.46 C
ATOM 8 O4' G A 89 -1.661 25.274 14.454 1.00 30.09 O
ATOM 9 C3' G A 89 -2.779 27.347 14.501 1.00 29.33 C
ATOM 10 O3' G A 89 -4.002 27.964 14.862 1.00 29.67 O
ATOM 11 C2' G A 89 -1.816 27.285 15.675 1.00 29.69 C
ATOM 12 O2' G A 89 -2.462 26.957 16.894 1.00 29.82 O
ATOM 13 C1' G A 89 -0.866 26.177 15.204 1.00 29.29 C
ATOM 14 N9 G A 89 0.184 26.730 14.350 1.00 29.13 N
ATOM 15 C8 G A 89 0.302 26.631 12.983 1.00 29.04 C
ATOM 16 N7 G A 89 1.348 27.248 12.506 1.00 29.04 N
ATOM 17 C5 G A 89 1.959 27.809 13.621 1.00 28.44 C
ATOM 18 C6 G A 89 3.133 28.599 13.726 1.00 28.04 C
ATOM 19 O6 G A 89 3.885 28.974 12.810 1.00 27.52 O
ATOM 20 N1 G A 89 3.405 28.953 15.054 1.00 27.80 N
ATOM 21 C2 G A 89 2.631 28.584 16.140 1.00 28.78 C
ATOM 22 N2 G A 89 3.020 29.005 17.354 1.00 28.66 N
ATOM 23 N3 G A 89 1.530 27.845 16.049 1.00 28.98 N
ATOM 24 C4 G A 89 1.253 27.495 14.764 1.00 29.11 C
ATOM 25 P A A 90 -4.376 29.445 14.382 1.00 29.58 P
ATOM 26 OP1 A A 90 -5.813 29.636 14.675 1.00 29.41 O
ATOM 27 OP2 A A 90 -3.884 29.659 12.996 1.00 29.14 O
ATOM 28 O5' A A 90 -3.525 30.369 15.373 1.00 29.72 O
TER
ATOM 1 O3' C B 87 0.950 21.383 5.749 1.00 25.81 O
ATOM 2 P A B 88 0.311 22.829 5.958 1.00 25.62 P
ATOM 3 OP1 A B 88 -0.970 22.836 5.221 1.00 26.25 O
ATOM 4 OP2 A B 88 1.347 23.840 5.654 1.00 25.89 O
ATOM 5 O5' A B 88 0.035 22.916 7.539 1.00 26.55 O
ATOM 6 C5' A B 88 -0.994 22.139 8.122 1.00 27.23 C
ATOM 7 C4' A B 88 -0.949 22.164 9.637 1.00 27.53 C
ATOM 8 O4' A B 88 0.354 21.756 10.124 1.00 27.69 O
ATOM 9 C3' A B 88 -1.152 23.518 10.295 1.00 27.62 C
ATOM 10 O3' A B 88 -2.514 23.911 10.295 1.00 27.36 O
ATOM 11 C2' A B 88 -0.630 23.208 11.692 1.00 27.27 C
ATOM 12 O2' A B 88 -1.527 22.409 12.435 1.00 27.12 O
ATOM 13 C1' A B 88 0.638 22.436 11.335 1.00 26.68 C
ATOM 14 N9 A B 88 1.773 23.332 11.119 1.00 26.14 N
ATOM 15 C8 A B 88 2.308 23.722 9.919 1.00 25.94 C
ATOM 16 N7 A B 88 3.320 24.548 10.029 1.00 26.31 N
ATOM 17 C5 A B 88 3.459 24.712 11.397 1.00 26.33 C
ATOM 18 C6 A B 88 4.363 25.470 12.177 1.00 26.70 C
ATOM 19 N6 A B 88 5.324 26.225 11.636 1.00 26.36 N
ATOM 20 N1 A B 88 4.242 25.421 13.528 1.00 26.30 N
ATOM 21 C2 A B 88 3.273 24.653 14.052 1.00 26.30 C
ATOM 22 N3 A B 88 2.366 23.897 13.420 1.00 26.02 N
ATOM 23 C4 A B 88 2.514 23.972 12.084 1.00 26.19 C
ATOM 24 P G B 89 -2.867 25.470 10.327 1.00 27.54 P
ATOM 25 OP1 G B 89 -4.318 25.574 10.076 1.00 27.83 O
ATOM 26 OP2 G B 89 -1.914 26.189 9.448 1.00 27.69 O
ATOM 27 O5' G B 89 -2.570 25.905 11.836 1.00 27.35 O
TER
Atoms:
OP1: (-4.318,25.574,10.076)
OP2: (-1.914,26.189,9.448)
C3': (-2.779,27.347,14.501)
C1': (-0.866,26.177,15.204)
C5': (-3.470,25.485,12.851)
O6: (3.885,28.974,12.810)
O4': (-1.661,25.274,14.454)
C8: (0.302,26.631,12.983)
C2: (2.631,28.584,16.140)
C6: (3.133,28.599,13.726)
C5: (1.959,27.809,13.621)
C4: (1.253,27.495,14.764)
P: (-2.867,25.470,10.327)
C4': (-2.975,25.857,14.237)
C2': (-1.816,27.285,15.675)
O2': (-2.462,26.957,16.894)
N1: (3.405,28.953,15.054)
N2: (3.020,29.005,17.354)
N3: (1.530,27.845,16.049)
N7: (1.348,27.248,12.506)
N9: (0.184,26.730,14.350)
O5': (-2.570,25.905,11.836)
O3': (-4.002,27.964,14.862)
OP2: (-1.914,26.189,9.448)
C3': (-2.779,27.347,14.501)
C1': (-0.866,26.177,15.204)
C5': (-3.470,25.485,12.851)
O6: (3.885,28.974,12.810)
O4': (-1.661,25.274,14.454)
C8: (0.302,26.631,12.983)
C2: (2.631,28.584,16.140)
C6: (3.133,28.599,13.726)
C5: (1.959,27.809,13.621)
C4: (1.253,27.495,14.764)
P: (-2.867,25.470,10.327)
C4': (-2.975,25.857,14.237)
C2': (-1.816,27.285,15.675)
O2': (-2.462,26.957,16.894)
N1: (3.405,28.953,15.054)
N2: (3.020,29.005,17.354)
N3: (1.530,27.845,16.049)
N7: (1.348,27.248,12.506)
N9: (0.184,26.730,14.350)
O5': (-2.570,25.905,11.836)
O3': (-4.002,27.964,14.862)
OP1: (-0.970,22.836,5.221)
OP2: (1.347,23.840,5.654)
C3': (-1.152,23.518,10.295)
C1': (0.638,22.436,11.335)
C5': (-0.994,22.139,8.122)
O4': (0.354,21.756,10.124)
C8: (2.308,23.722,9.919)
O2': (-1.527,22.409,12.435)
C6: (4.363,25.470,12.177)
C5: (3.459,24.712,11.397)
C4: (2.514,23.972,12.084)
P: (0.311,22.829,5.958)
C4': (-0.949,22.164,9.637)
C2': (-0.630,23.208,11.692)
C2: (3.273,24.653,14.052)
N1: (4.242,25.421,13.528)
N3: (2.366,23.897,13.420)
N6: (5.324,26.225,11.636)
N7: (3.320,24.548,10.029)
N9: (1.773,23.332,11.119)
O5': (0.035,22.916,7.539)
O3': (-2.514,23.911,10.295)
OP2: (1.347,23.840,5.654)
C3': (-1.152,23.518,10.295)
C1': (0.638,22.436,11.335)
C5': (-0.994,22.139,8.122)
O4': (0.354,21.756,10.124)
C8: (2.308,23.722,9.919)
O2': (-1.527,22.409,12.435)
C6: (4.363,25.470,12.177)
C5: (3.459,24.712,11.397)
C4: (2.514,23.972,12.084)
P: (0.311,22.829,5.958)
C4': (-0.949,22.164,9.637)
C2': (-0.630,23.208,11.692)
C2: (3.273,24.653,14.052)
N1: (4.242,25.421,13.528)
N3: (2.366,23.897,13.420)
N6: (5.324,26.225,11.636)
N7: (3.320,24.548,10.029)
N9: (1.773,23.332,11.119)
O5': (0.035,22.916,7.539)
O3': (-2.514,23.911,10.295)
Image (generated by PyMOL):