Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01236:01237
Extra
PDB:
ATOM 1 O3' U A1235 4.236 86.067 58.619 1.00 52.80 O
ATOM 2 P C A1236 5.098 85.250 57.525 1.00 53.94 P
ATOM 3 OP1 C A1236 4.374 85.295 56.227 1.00 52.14 O
ATOM 4 OP2 C A1236 5.443 83.928 58.118 1.00 52.89 O
ATOM 5 O5' C A1236 6.426 86.118 57.372 1.00 53.21 O
ATOM 6 C5' C A1236 7.518 85.667 56.540 1.00 54.77 C
ATOM 7 C4' C A1236 8.543 86.768 56.377 1.00 54.26 C
ATOM 8 O4' C A1236 8.015 87.832 55.547 1.00 55.05 O
ATOM 9 C3' C A1236 8.933 87.450 57.671 1.00 54.05 C
ATOM 10 O3' C A1236 9.931 86.689 58.331 1.00 54.06 O
ATOM 11 C2' C A1236 9.424 88.816 57.202 1.00 54.90 C
ATOM 12 O2' C A1236 10.757 88.803 56.729 1.00 54.71 O
ATOM 13 C1' C A1236 8.489 89.083 56.020 1.00 55.11 C
ATOM 14 N1 C A1236 7.331 89.955 56.306 1.00 55.69 N
ATOM 15 C2 C A1236 7.499 91.351 56.226 1.00 56.65 C
ATOM 16 O2 C A1236 8.632 91.813 55.991 1.00 59.64 O
ATOM 17 N3 C A1236 6.430 92.159 56.418 1.00 55.09 N
ATOM 18 C4 C A1236 5.237 91.632 56.700 1.00 55.13 C
ATOM 19 N4 C A1236 4.208 92.469 56.860 1.00 54.59 N
ATOM 20 C5 C A1236 5.044 90.222 56.827 1.00 55.35 C
ATOM 21 C6 C A1236 6.108 89.428 56.623 1.00 55.55 C
ATOM 22 P A A1237 9.972 86.657 59.932 1.00 54.28 P
ATOM 23 OP1 A A1237 11.177 85.879 60.330 1.00 51.90 O
ATOM 24 OP2 A A1237 8.631 86.250 60.433 1.00 54.28 O
ATOM 25 O5' A A1237 10.185 88.184 60.327 1.00 55.90 O
TER
ATOM 1 O3' C B1236 9.931 86.689 58.331 1.00 54.06 O
ATOM 2 P A B1237 9.972 86.657 59.932 1.00 54.28 P
ATOM 3 OP1 A B1237 11.177 85.879 60.330 1.00 51.90 O
ATOM 4 OP2 A B1237 8.631 86.250 60.433 1.00 54.28 O
ATOM 5 O5' A B1237 10.185 88.184 60.327 1.00 55.90 O
ATOM 6 C5' A B1237 11.462 88.829 60.153 1.00 59.05 C
ATOM 7 C4' A B1237 11.377 90.263 60.604 1.00 60.59 C
ATOM 8 O4' A B1237 10.462 90.975 59.734 1.00 60.70 O
ATOM 9 C3' A B1237 10.818 90.457 62.003 1.00 62.51 C
ATOM 10 O3' A B1237 11.861 90.326 62.970 1.00 67.48 O
ATOM 11 C2' A B1237 10.236 91.865 61.934 1.00 61.49 C
ATOM 12 O2' A B1237 11.212 92.873 62.097 1.00 63.07 O
ATOM 13 C1' A B1237 9.718 91.913 60.491 1.00 60.12 C
ATOM 14 N9 A B1237 8.306 91.579 60.346 1.00 59.45 N
ATOM 15 C8 A B1237 7.729 90.334 60.409 1.00 59.06 C
ATOM 16 N7 A B1237 6.431 90.345 60.247 1.00 58.99 N
ATOM 17 C5 A B1237 6.129 91.686 60.067 1.00 59.41 C
ATOM 18 C6 A B1237 4.916 92.360 59.861 1.00 60.56 C
ATOM 19 N6 A B1237 3.727 91.746 59.812 1.00 60.82 N
ATOM 20 N1 A B1237 4.961 93.705 59.710 1.00 60.98 N
ATOM 21 C2 A B1237 6.151 94.317 59.777 1.00 60.25 C
ATOM 22 N3 A B1237 7.359 93.791 59.977 1.00 60.35 N
ATOM 23 C4 A B1237 7.277 92.457 60.116 1.00 59.50 C
ATOM 24 P U B1238 11.542 89.734 64.436 1.00 72.12 P
ATOM 25 OP1 U B1238 11.671 88.249 64.363 1.00 69.98 O
ATOM 26 OP2 U B1238 10.276 90.343 64.934 1.00 70.84 O
ATOM 27 O5' U B1238 12.756 90.272 65.323 1.00 76.74 O
TER
ATOM 2 P C A1236 5.098 85.250 57.525 1.00 53.94 P
ATOM 3 OP1 C A1236 4.374 85.295 56.227 1.00 52.14 O
ATOM 4 OP2 C A1236 5.443 83.928 58.118 1.00 52.89 O
ATOM 5 O5' C A1236 6.426 86.118 57.372 1.00 53.21 O
ATOM 6 C5' C A1236 7.518 85.667 56.540 1.00 54.77 C
ATOM 7 C4' C A1236 8.543 86.768 56.377 1.00 54.26 C
ATOM 8 O4' C A1236 8.015 87.832 55.547 1.00 55.05 O
ATOM 9 C3' C A1236 8.933 87.450 57.671 1.00 54.05 C
ATOM 10 O3' C A1236 9.931 86.689 58.331 1.00 54.06 O
ATOM 11 C2' C A1236 9.424 88.816 57.202 1.00 54.90 C
ATOM 12 O2' C A1236 10.757 88.803 56.729 1.00 54.71 O
ATOM 13 C1' C A1236 8.489 89.083 56.020 1.00 55.11 C
ATOM 14 N1 C A1236 7.331 89.955 56.306 1.00 55.69 N
ATOM 15 C2 C A1236 7.499 91.351 56.226 1.00 56.65 C
ATOM 16 O2 C A1236 8.632 91.813 55.991 1.00 59.64 O
ATOM 17 N3 C A1236 6.430 92.159 56.418 1.00 55.09 N
ATOM 18 C4 C A1236 5.237 91.632 56.700 1.00 55.13 C
ATOM 19 N4 C A1236 4.208 92.469 56.860 1.00 54.59 N
ATOM 20 C5 C A1236 5.044 90.222 56.827 1.00 55.35 C
ATOM 21 C6 C A1236 6.108 89.428 56.623 1.00 55.55 C
ATOM 22 P A A1237 9.972 86.657 59.932 1.00 54.28 P
ATOM 23 OP1 A A1237 11.177 85.879 60.330 1.00 51.90 O
ATOM 24 OP2 A A1237 8.631 86.250 60.433 1.00 54.28 O
ATOM 25 O5' A A1237 10.185 88.184 60.327 1.00 55.90 O
TER
ATOM 1 O3' C B1236 9.931 86.689 58.331 1.00 54.06 O
ATOM 2 P A B1237 9.972 86.657 59.932 1.00 54.28 P
ATOM 3 OP1 A B1237 11.177 85.879 60.330 1.00 51.90 O
ATOM 4 OP2 A B1237 8.631 86.250 60.433 1.00 54.28 O
ATOM 5 O5' A B1237 10.185 88.184 60.327 1.00 55.90 O
ATOM 6 C5' A B1237 11.462 88.829 60.153 1.00 59.05 C
ATOM 7 C4' A B1237 11.377 90.263 60.604 1.00 60.59 C
ATOM 8 O4' A B1237 10.462 90.975 59.734 1.00 60.70 O
ATOM 9 C3' A B1237 10.818 90.457 62.003 1.00 62.51 C
ATOM 10 O3' A B1237 11.861 90.326 62.970 1.00 67.48 O
ATOM 11 C2' A B1237 10.236 91.865 61.934 1.00 61.49 C
ATOM 12 O2' A B1237 11.212 92.873 62.097 1.00 63.07 O
ATOM 13 C1' A B1237 9.718 91.913 60.491 1.00 60.12 C
ATOM 14 N9 A B1237 8.306 91.579 60.346 1.00 59.45 N
ATOM 15 C8 A B1237 7.729 90.334 60.409 1.00 59.06 C
ATOM 16 N7 A B1237 6.431 90.345 60.247 1.00 58.99 N
ATOM 17 C5 A B1237 6.129 91.686 60.067 1.00 59.41 C
ATOM 18 C6 A B1237 4.916 92.360 59.861 1.00 60.56 C
ATOM 19 N6 A B1237 3.727 91.746 59.812 1.00 60.82 N
ATOM 20 N1 A B1237 4.961 93.705 59.710 1.00 60.98 N
ATOM 21 C2 A B1237 6.151 94.317 59.777 1.00 60.25 C
ATOM 22 N3 A B1237 7.359 93.791 59.977 1.00 60.35 N
ATOM 23 C4 A B1237 7.277 92.457 60.116 1.00 59.50 C
ATOM 24 P U B1238 11.542 89.734 64.436 1.00 72.12 P
ATOM 25 OP1 U B1238 11.671 88.249 64.363 1.00 69.98 O
ATOM 26 OP2 U B1238 10.276 90.343 64.934 1.00 70.84 O
ATOM 27 O5' U B1238 12.756 90.272 65.323 1.00 76.74 O
TER
Atoms:
C2: (7.499,91.351,56.226)
OP1: (4.374,85.295,56.227)
OP2: (5.443,83.928,58.118)
C4: (5.237,91.632,56.700)
O5': (6.426,86.118,57.372)
C3': (8.933,87.450,57.671)
C1': (8.489,89.083,56.020)
O4': (8.015,87.832,55.547)
C5': (7.518,85.667,56.540)
P: (5.098,85.250,57.525)
O2: (8.632,91.813,55.991)
C4': (8.543,86.768,56.377)
C2': (9.424,88.816,57.202)
O2': (10.757,88.803,56.729)
N1: (7.331,89.955,56.306)
N3: (6.430,92.159,56.418)
N4: (4.208,92.469,56.860)
C6: (6.108,89.428,56.623)
C5: (5.044,90.222,56.827)
O3': (9.931,86.689,58.331)
OP1: (4.374,85.295,56.227)
OP2: (5.443,83.928,58.118)
C4: (5.237,91.632,56.700)
O5': (6.426,86.118,57.372)
C3': (8.933,87.450,57.671)
C1': (8.489,89.083,56.020)
O4': (8.015,87.832,55.547)
C5': (7.518,85.667,56.540)
P: (5.098,85.250,57.525)
O2: (8.632,91.813,55.991)
C4': (8.543,86.768,56.377)
C2': (9.424,88.816,57.202)
O2': (10.757,88.803,56.729)
N1: (7.331,89.955,56.306)
N3: (6.430,92.159,56.418)
N4: (4.208,92.469,56.860)
C6: (6.108,89.428,56.623)
C5: (5.044,90.222,56.827)
O3': (9.931,86.689,58.331)
OP1: (11.177,85.879,60.330)
OP2: (8.631,86.250,60.433)
C3': (10.818,90.457,62.003)
C1': (9.718,91.913,60.491)
C5': (11.462,88.829,60.153)
O4': (10.462,90.975,59.734)
C8: (7.729,90.334,60.409)
O2': (11.212,92.873,62.097)
C6: (4.916,92.360,59.861)
C5: (6.129,91.686,60.067)
C4: (7.277,92.457,60.116)
P: (9.972,86.657,59.932)
C4': (11.377,90.263,60.604)
C2': (10.236,91.865,61.934)
C2: (6.151,94.317,59.777)
N1: (4.961,93.705,59.710)
N3: (7.359,93.791,59.977)
N6: (3.727,91.746,59.812)
N7: (6.431,90.345,60.247)
N9: (8.306,91.579,60.346)
O5': (10.185,88.184,60.327)
O3': (11.861,90.326,62.970)
OP2: (8.631,86.250,60.433)
C3': (10.818,90.457,62.003)
C1': (9.718,91.913,60.491)
C5': (11.462,88.829,60.153)
O4': (10.462,90.975,59.734)
C8: (7.729,90.334,60.409)
O2': (11.212,92.873,62.097)
C6: (4.916,92.360,59.861)
C5: (6.129,91.686,60.067)
C4: (7.277,92.457,60.116)
P: (9.972,86.657,59.932)
C4': (11.377,90.263,60.604)
C2': (10.236,91.865,61.934)
C2: (6.151,94.317,59.777)
N1: (4.961,93.705,59.710)
N3: (7.359,93.791,59.977)
N6: (3.727,91.746,59.812)
N7: (6.431,90.345,60.247)
N9: (8.306,91.579,60.346)
O5': (10.185,88.184,60.327)
O3': (11.861,90.326,62.970)
Image (generated by PyMOL):