ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0108:0107

Extra

PDB:
ATOM 1 O3' A A 107 88.814 151.753 36.360 1.00 44.53 O
ATOM 2 P G A 108 88.017 150.755 37.331 1.00 46.96 P
ATOM 3 OP1 G A 108 89.042 149.919 38.013 1.00 46.69 O
ATOM 4 OP2 G A 108 86.923 150.105 36.559 1.00 45.21 O
ATOM 5 O5' G A 108 87.381 151.721 38.425 1.00 42.99 O
ATOM 6 C5' G A 108 88.225 152.288 39.426 1.00 41.89 C
ATOM 7 C4' G A 108 87.584 153.492 40.054 1.00 39.73 C
ATOM 8 O4' G A 108 87.078 154.372 39.018 1.00 38.14 O
ATOM 9 C3' G A 108 86.353 153.265 40.903 1.00 38.57 C
ATOM 10 O3' G A 108 86.671 152.754 42.182 1.00 38.90 O
ATOM 11 C2' G A 108 85.802 154.678 40.986 1.00 36.84 C
ATOM 12 O2' G A 108 86.570 155.480 41.860 1.00 37.27 O
ATOM 13 C1' G A 108 86.019 155.155 39.548 1.00 34.58 C
ATOM 14 N9 G A 108 84.822 154.940 38.742 1.00 32.28 N
ATOM 15 C8 G A 108 84.631 154.029 37.729 1.00 31.30 C
ATOM 16 N7 G A 108 83.422 154.062 37.235 1.00 30.68 N
ATOM 17 C5 G A 108 82.785 155.061 37.957 1.00 30.05 C
ATOM 18 C6 G A 108 81.452 155.542 37.887 1.00 31.80 C
ATOM 19 O6 G A 108 80.537 155.184 37.134 1.00 32.14 O
ATOM 20 N1 G A 108 81.227 156.545 38.821 1.00 31.45 N
ATOM 21 C2 G A 108 82.164 157.029 39.699 1.00 29.77 C
ATOM 22 N2 G A 108 81.768 158.006 40.515 1.00 30.88 N
ATOM 23 N3 G A 108 83.398 156.593 39.771 1.00 28.98 N
ATOM 24 C4 G A 108 83.639 155.615 38.882 1.00 29.92 C
ATOM 25 P A A 109 85.592 151.852 42.956 1.00 41.30 P
ATOM 26 OP1 A A 109 86.247 151.427 44.220 1.00 42.74 O
ATOM 27 OP2 A A 109 85.066 150.825 42.013 1.00 41.93 O
ATOM 28 O5' A A 109 84.392 152.846 43.294 1.00 36.90 O
TER

ATOM 1 O3' G B 106 86.948 150.554 30.609 1.00 43.67 O
ATOM 2 P A B 107 86.870 150.050 32.131 1.00 45.71 P
ATOM 3 OP1 A B 107 87.918 149.003 32.263 1.00 42.89 O
ATOM 4 OP2 A B 107 85.462 149.732 32.467 1.00 47.01 O
ATOM 5 O5' A B 107 87.293 151.316 33.001 1.00 44.77 O
ATOM 6 C5' A B 107 88.677 151.663 33.174 1.00 42.79 C
ATOM 7 C4' A B 107 88.808 152.793 34.161 1.00 41.82 C
ATOM 8 O4' A B 107 88.174 153.982 33.626 1.00 41.34 O
ATOM 9 C3' A B 107 88.087 152.583 35.475 1.00 42.83 C
ATOM 10 O3' A B 107 88.814 151.753 36.360 1.00 44.53 O
ATOM 11 C2' A B 107 87.941 154.008 35.980 1.00 41.31 C
ATOM 12 O2' A B 107 89.158 154.508 36.494 1.00 44.21 O
ATOM 13 C1' A B 107 87.601 154.737 34.683 1.00 38.01 C
ATOM 14 N9 A B 107 86.165 154.823 34.441 1.00 35.64 N
ATOM 15 C8 A B 107 85.389 153.969 33.698 1.00 35.78 C
ATOM 16 N7 A B 107 84.124 154.309 33.650 1.00 34.46 N
ATOM 17 C5 A B 107 84.062 155.465 34.412 1.00 33.56 C
ATOM 18 C6 A B 107 82.996 156.319 34.748 1.00 33.42 C
ATOM 19 N6 A B 107 81.742 156.143 34.326 1.00 32.13 N
ATOM 20 N1 A B 107 83.266 157.375 35.540 1.00 34.59 N
ATOM 21 C2 A B 107 84.528 157.560 35.952 1.00 36.96 C
ATOM 22 N3 A B 107 85.617 156.832 35.695 1.00 36.69 N
ATOM 23 C4 A B 107 85.311 155.788 34.912 1.00 34.37 C
ATOM 24 P G B 108 88.017 150.755 37.331 1.00 46.96 P
ATOM 25 OP1 G B 108 89.042 149.919 38.013 1.00 46.69 O
ATOM 26 OP2 G B 108 86.923 150.105 36.559 1.00 45.21 O
ATOM 27 O5' G B 108 87.381 151.721 38.425 1.00 42.99 O
TER

Atoms:
OP1: (89.042,149.919,38.013)
OP2: (86.923,150.105,36.559)
C3': (86.353,153.265,40.903)
C1': (86.019,155.155,39.548)
C5': (88.225,152.288,39.426)
O6: (80.537,155.184,37.134)
O4': (87.078,154.372,39.018)
C8: (84.631,154.029,37.729)
C2: (82.164,157.029,39.699)
C6: (81.452,155.542,37.887)
C5: (82.785,155.061,37.957)
C4: (83.639,155.615,38.882)
P: (88.017,150.755,37.331)
C4': (87.584,153.492,40.054)
C2': (85.802,154.678,40.986)
O2': (86.570,155.480,41.860)
N1: (81.227,156.545,38.821)
N2: (81.768,158.006,40.515)
N3: (83.398,156.593,39.771)
N7: (83.422,154.062,37.235)
N9: (84.822,154.940,38.742)
O5': (87.381,151.721,38.425)
O3': (86.671,152.754,42.182)
OP1: (87.918,149.003,32.263)
OP2: (85.462,149.732,32.467)
C3': (88.087,152.583,35.475)
C1': (87.601,154.737,34.683)
C5': (88.677,151.663,33.174)
O4': (88.174,153.982,33.626)
C8: (85.389,153.969,33.698)
O2': (89.158,154.508,36.494)
C6: (82.996,156.319,34.748)
C5: (84.062,155.465,34.412)
C4: (85.311,155.788,34.912)
P: (86.870,150.050,32.131)
C4': (88.808,152.793,34.161)
C2': (87.941,154.008,35.980)
C2: (84.528,157.560,35.952)
N1: (83.266,157.375,35.540)
N3: (85.617,156.832,35.695)
N6: (81.742,156.143,34.326)
N7: (84.124,154.309,33.650)
N9: (86.165,154.823,34.441)
O5': (87.293,151.316,33.001)
O3': (88.814,151.753,36.360)
Image (generated by PyMOL):
PyMOL image
show in jmol