ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A736:A735

Extra

PDB:
ATOM 1 O3' A A 735 39.030 -12.647 -6.285 1.00 33.72 O
ATOM 2 P G A 736 39.531 -14.078 -6.784 1.00 42.30 P
ATOM 3 OP1 G A 736 39.877 -13.940 -8.234 1.00 27.54 O
ATOM 4 OP2 G A 736 38.497 -15.073 -6.361 1.00 30.55 O
ATOM 5 O5' G A 736 40.867 -14.281 -5.947 1.00 45.32 O
ATOM 6 C5' G A 736 41.966 -13.388 -6.136 1.00 43.03 C
ATOM 7 C4' G A 736 43.068 -13.625 -5.136 1.00 38.51 C
ATOM 8 O4' G A 736 42.517 -13.580 -3.801 1.00 36.16 O
ATOM 9 C3' G A 736 43.771 -14.963 -5.248 1.00 33.66 C
ATOM 10 O3' G A 736 45.116 -14.809 -4.844 1.00 29.60 O
ATOM 11 C2' G A 736 43.056 -15.792 -4.214 1.00 33.86 C
ATOM 12 O2' G A 736 43.812 -16.871 -3.738 1.00 43.44 O
ATOM 13 C1' G A 736 42.826 -14.766 -3.129 1.00 34.37 C
ATOM 14 N9 G A 736 41.711 -15.078 -2.270 1.00 42.62 N
ATOM 15 C8 G A 736 40.529 -15.547 -2.750 1.00 45.98 C
ATOM 16 N7 G A 736 39.664 -15.731 -1.801 1.00 51.35 N
ATOM 17 C5 G A 736 40.325 -15.365 -0.638 1.00 44.29 C
ATOM 18 C6 G A 736 39.853 -15.381 0.695 1.00 45.14 C
ATOM 19 O6 G A 736 38.722 -15.727 1.098 1.00 54.39 O
ATOM 20 N1 G A 736 40.845 -14.945 1.559 1.00 35.68 N
ATOM 21 C2 G A 736 42.095 -14.536 1.180 1.00 40.20 C
ATOM 22 N2 G A 736 42.894 -14.129 2.171 1.00 42.74 N
ATOM 23 N3 G A 736 42.535 -14.515 -0.063 1.00 39.60 N
ATOM 24 C4 G A 736 41.601 -14.946 -0.913 1.00 41.34 C
ATOM 25 P G A 737 46.278 -14.776 -5.935 1.00 36.12 P
ATOM 26 OP1 G A 737 47.524 -14.429 -5.221 1.00 38.89 O
ATOM 27 OP2 G A 737 45.808 -13.906 -7.028 1.00 41.41 O
ATOM 28 O5' G A 737 46.352 -16.291 -6.446 1.00 33.36 O
TER

ATOM 1 O3' G B 734 33.879 -12.541 -3.095 1.00 49.71 O
ATOM 2 P A B 735 34.401 -13.899 -3.753 1.00 42.99 P
ATOM 3 OP1 A B 735 33.496 -14.206 -4.905 1.00 36.82 O
ATOM 4 OP2 A B 735 34.539 -14.889 -2.668 1.00 40.68 O
ATOM 5 O5' A B 735 35.829 -13.488 -4.282 1.00 40.18 O
ATOM 6 C5' A B 735 35.962 -12.488 -5.259 1.00 37.97 C
ATOM 7 C4' A B 735 37.198 -11.693 -5.018 1.00 46.02 C
ATOM 8 O4' A B 735 37.116 -11.074 -3.721 1.00 45.37 O
ATOM 9 C3' A B 735 38.488 -12.490 -4.990 1.00 36.66 C
ATOM 10 O3' A B 735 39.030 -12.647 -6.285 1.00 33.72 O
ATOM 11 C2' A B 735 39.388 -11.676 -4.078 1.00 39.10 C
ATOM 12 O2' A B 735 40.075 -10.699 -4.838 1.00 40.00 O
ATOM 13 C1' A B 735 38.389 -10.960 -3.163 1.00 39.15 C
ATOM 14 N9 A B 735 38.333 -11.509 -1.808 1.00 42.03 N
ATOM 15 C8 A B 735 37.248 -12.152 -1.275 1.00 42.88 C
ATOM 16 N7 A B 735 37.413 -12.492 -0.018 1.00 44.96 N
ATOM 17 C5 A B 735 38.678 -12.009 0.292 1.00 41.34 C
ATOM 18 C6 A B 735 39.416 -12.050 1.475 1.00 40.76 C
ATOM 19 N6 A B 735 38.957 -12.618 2.590 1.00 44.20 N
ATOM 20 N1 A B 735 40.647 -11.494 1.460 1.00 45.92 N
ATOM 21 C2 A B 735 41.087 -10.926 0.324 1.00 45.76 C
ATOM 22 N3 A B 735 40.484 -10.804 -0.857 1.00 42.10 N
ATOM 23 C4 A B 735 39.260 -11.379 -0.798 1.00 46.24 C
ATOM 24 P G B 736 39.531 -14.078 -6.784 1.00 42.30 P
ATOM 25 OP1 G B 736 39.877 -13.940 -8.234 1.00 27.54 O
ATOM 26 OP2 G B 736 38.497 -15.073 -6.361 1.00 30.55 O
ATOM 27 O5' G B 736 40.867 -14.281 -5.947 1.00 45.32 O
TER

Atoms:
OP1: (39.877,-13.940,-8.234)
OP2: (38.497,-15.073,-6.361)
C3': (43.771,-14.963,-5.248)
C1': (42.826,-14.766,-3.129)
C5': (41.966,-13.388,-6.136)
O6: (38.722,-15.727,1.098)
O4': (42.517,-13.580,-3.801)
C8: (40.529,-15.547,-2.750)
C2: (42.095,-14.536,1.180)
C6: (39.853,-15.381,0.695)
C5: (40.325,-15.365,-0.638)
C4: (41.601,-14.946,-0.913)
P: (39.531,-14.078,-6.784)
C4': (43.068,-13.625,-5.136)
C2': (43.056,-15.792,-4.214)
O2': (43.812,-16.871,-3.738)
N1: (40.845,-14.945,1.559)
N2: (42.894,-14.129,2.171)
N3: (42.535,-14.515,-0.063)
N7: (39.664,-15.731,-1.801)
N9: (41.711,-15.078,-2.270)
O5': (40.867,-14.281,-5.947)
O3': (45.116,-14.809,-4.844)
OP1: (33.496,-14.206,-4.905)
OP2: (34.539,-14.889,-2.668)
C3': (38.488,-12.490,-4.990)
C1': (38.389,-10.960,-3.163)
C5': (35.962,-12.488,-5.259)
O4': (37.116,-11.074,-3.721)
C8: (37.248,-12.152,-1.275)
O2': (40.075,-10.699,-4.838)
C6: (39.416,-12.050,1.475)
C5: (38.678,-12.009,0.292)
C4: (39.260,-11.379,-0.798)
P: (34.401,-13.899,-3.753)
C4': (37.198,-11.693,-5.018)
C2': (39.388,-11.676,-4.078)
C2: (41.087,-10.926,0.324)
N1: (40.647,-11.494,1.460)
N3: (40.484,-10.804,-0.857)
N6: (38.957,-12.618,2.590)
N7: (37.413,-12.492,-0.018)
N9: (38.333,-11.509,-1.808)
O5': (35.829,-13.488,-4.282)
O3': (39.030,-12.647,-6.285)
Image (generated by PyMOL):
PyMOL image
show in jmol