Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:01236:01237
Extra
PDB:
ATOM 1 O3' U A1235 4.270 85.971 58.633 1.00 57.24 O
ATOM 2 P C A1236 5.100 85.155 57.519 1.00 57.27 P
ATOM 3 OP1 C A1236 4.340 85.222 56.250 1.00 56.64 O
ATOM 4 OP2 C A1236 5.455 83.831 58.087 1.00 56.61 O
ATOM 5 O5' C A1236 6.432 86.010 57.349 1.00 59.12 O
ATOM 6 C5' C A1236 7.571 85.488 56.635 1.00 61.42 C
ATOM 7 C4' C A1236 8.609 86.571 56.455 1.00 62.05 C
ATOM 8 O4' C A1236 8.085 87.603 55.582 1.00 62.67 O
ATOM 9 C3' C A1236 8.995 87.302 57.729 1.00 61.90 C
ATOM 10 O3' C A1236 10.019 86.591 58.412 1.00 62.72 O
ATOM 11 C2' C A1236 9.471 88.654 57.213 1.00 63.01 C
ATOM 12 O2' C A1236 10.804 88.627 56.738 1.00 61.87 O
ATOM 13 C1' C A1236 8.528 88.874 56.026 1.00 62.94 C
ATOM 14 N1 C A1236 7.347 89.714 56.302 1.00 63.59 N
ATOM 15 C2 C A1236 7.489 91.110 56.284 1.00 64.92 C
ATOM 16 O2 C A1236 8.612 91.602 56.082 1.00 67.58 O
ATOM 17 N3 C A1236 6.402 91.887 56.493 1.00 64.22 N
ATOM 18 C4 C A1236 5.213 91.326 56.719 1.00 63.83 C
ATOM 19 N4 C A1236 4.166 92.133 56.900 1.00 63.96 N
ATOM 20 C5 C A1236 5.043 89.912 56.764 1.00 63.78 C
ATOM 21 C6 C A1236 6.125 89.151 56.553 1.00 63.70 C
ATOM 22 P A A1237 10.031 86.557 60.014 1.00 64.28 P
ATOM 23 OP1 A A1237 11.213 85.768 60.427 1.00 62.76 O
ATOM 24 OP2 A A1237 8.680 86.160 60.491 1.00 65.36 O
ATOM 25 O5' A A1237 10.256 88.077 60.422 1.00 67.07 O
TER
ATOM 1 O3' C B1236 10.019 86.591 58.412 1.00 62.72 O
ATOM 2 P A B1237 10.031 86.557 60.014 1.00 64.28 P
ATOM 3 OP1 A B1237 11.213 85.768 60.427 1.00 62.76 O
ATOM 4 OP2 A B1237 8.680 86.160 60.491 1.00 65.36 O
ATOM 5 O5' A B1237 10.256 88.077 60.422 1.00 67.07 O
ATOM 6 C5' A B1237 11.536 88.712 60.257 1.00 71.66 C
ATOM 7 C4' A B1237 11.445 90.162 60.657 1.00 73.95 C
ATOM 8 O4' A B1237 10.537 90.845 59.760 1.00 73.99 O
ATOM 9 C3' A B1237 10.870 90.400 62.043 1.00 76.62 C
ATOM 10 O3' A B1237 11.887 90.293 63.029 1.00 82.27 O
ATOM 11 C2' A B1237 10.299 91.808 61.929 1.00 75.47 C
ATOM 12 O2' A B1237 11.268 92.825 62.091 1.00 75.86 O
ATOM 13 C1' A B1237 9.792 91.811 60.482 1.00 74.33 C
ATOM 14 N9 A B1237 8.379 91.471 60.354 1.00 73.14 N
ATOM 15 C8 A B1237 7.805 90.228 60.430 1.00 73.17 C
ATOM 16 N7 A B1237 6.506 90.236 60.278 1.00 73.32 N
ATOM 17 C5 A B1237 6.202 91.574 60.088 1.00 73.54 C
ATOM 18 C6 A B1237 4.990 92.241 59.877 1.00 75.24 C
ATOM 19 N6 A B1237 3.805 91.624 59.827 1.00 76.01 N
ATOM 20 N1 A B1237 5.032 93.583 59.719 1.00 75.88 N
ATOM 21 C2 A B1237 6.219 94.198 59.782 1.00 74.41 C
ATOM 22 N3 A B1237 7.426 93.678 59.983 1.00 73.70 N
ATOM 23 C4 A B1237 7.346 92.346 60.129 1.00 73.35 C
ATOM 24 P U B1238 11.542 89.692 64.480 1.00 87.20 P
ATOM 25 OP1 U B1238 11.586 88.210 64.367 1.00 85.86 O
ATOM 26 OP2 U B1238 10.307 90.356 64.979 1.00 86.60 O
ATOM 27 O5' U B1238 12.787 90.150 65.368 1.00 91.36 O
TER
ATOM 2 P C A1236 5.100 85.155 57.519 1.00 57.27 P
ATOM 3 OP1 C A1236 4.340 85.222 56.250 1.00 56.64 O
ATOM 4 OP2 C A1236 5.455 83.831 58.087 1.00 56.61 O
ATOM 5 O5' C A1236 6.432 86.010 57.349 1.00 59.12 O
ATOM 6 C5' C A1236 7.571 85.488 56.635 1.00 61.42 C
ATOM 7 C4' C A1236 8.609 86.571 56.455 1.00 62.05 C
ATOM 8 O4' C A1236 8.085 87.603 55.582 1.00 62.67 O
ATOM 9 C3' C A1236 8.995 87.302 57.729 1.00 61.90 C
ATOM 10 O3' C A1236 10.019 86.591 58.412 1.00 62.72 O
ATOM 11 C2' C A1236 9.471 88.654 57.213 1.00 63.01 C
ATOM 12 O2' C A1236 10.804 88.627 56.738 1.00 61.87 O
ATOM 13 C1' C A1236 8.528 88.874 56.026 1.00 62.94 C
ATOM 14 N1 C A1236 7.347 89.714 56.302 1.00 63.59 N
ATOM 15 C2 C A1236 7.489 91.110 56.284 1.00 64.92 C
ATOM 16 O2 C A1236 8.612 91.602 56.082 1.00 67.58 O
ATOM 17 N3 C A1236 6.402 91.887 56.493 1.00 64.22 N
ATOM 18 C4 C A1236 5.213 91.326 56.719 1.00 63.83 C
ATOM 19 N4 C A1236 4.166 92.133 56.900 1.00 63.96 N
ATOM 20 C5 C A1236 5.043 89.912 56.764 1.00 63.78 C
ATOM 21 C6 C A1236 6.125 89.151 56.553 1.00 63.70 C
ATOM 22 P A A1237 10.031 86.557 60.014 1.00 64.28 P
ATOM 23 OP1 A A1237 11.213 85.768 60.427 1.00 62.76 O
ATOM 24 OP2 A A1237 8.680 86.160 60.491 1.00 65.36 O
ATOM 25 O5' A A1237 10.256 88.077 60.422 1.00 67.07 O
TER
ATOM 1 O3' C B1236 10.019 86.591 58.412 1.00 62.72 O
ATOM 2 P A B1237 10.031 86.557 60.014 1.00 64.28 P
ATOM 3 OP1 A B1237 11.213 85.768 60.427 1.00 62.76 O
ATOM 4 OP2 A B1237 8.680 86.160 60.491 1.00 65.36 O
ATOM 5 O5' A B1237 10.256 88.077 60.422 1.00 67.07 O
ATOM 6 C5' A B1237 11.536 88.712 60.257 1.00 71.66 C
ATOM 7 C4' A B1237 11.445 90.162 60.657 1.00 73.95 C
ATOM 8 O4' A B1237 10.537 90.845 59.760 1.00 73.99 O
ATOM 9 C3' A B1237 10.870 90.400 62.043 1.00 76.62 C
ATOM 10 O3' A B1237 11.887 90.293 63.029 1.00 82.27 O
ATOM 11 C2' A B1237 10.299 91.808 61.929 1.00 75.47 C
ATOM 12 O2' A B1237 11.268 92.825 62.091 1.00 75.86 O
ATOM 13 C1' A B1237 9.792 91.811 60.482 1.00 74.33 C
ATOM 14 N9 A B1237 8.379 91.471 60.354 1.00 73.14 N
ATOM 15 C8 A B1237 7.805 90.228 60.430 1.00 73.17 C
ATOM 16 N7 A B1237 6.506 90.236 60.278 1.00 73.32 N
ATOM 17 C5 A B1237 6.202 91.574 60.088 1.00 73.54 C
ATOM 18 C6 A B1237 4.990 92.241 59.877 1.00 75.24 C
ATOM 19 N6 A B1237 3.805 91.624 59.827 1.00 76.01 N
ATOM 20 N1 A B1237 5.032 93.583 59.719 1.00 75.88 N
ATOM 21 C2 A B1237 6.219 94.198 59.782 1.00 74.41 C
ATOM 22 N3 A B1237 7.426 93.678 59.983 1.00 73.70 N
ATOM 23 C4 A B1237 7.346 92.346 60.129 1.00 73.35 C
ATOM 24 P U B1238 11.542 89.692 64.480 1.00 87.20 P
ATOM 25 OP1 U B1238 11.586 88.210 64.367 1.00 85.86 O
ATOM 26 OP2 U B1238 10.307 90.356 64.979 1.00 86.60 O
ATOM 27 O5' U B1238 12.787 90.150 65.368 1.00 91.36 O
TER
Atoms:
C2: (7.489,91.110,56.284)
OP1: (4.340,85.222,56.250)
OP2: (5.455,83.831,58.087)
C4: (5.213,91.326,56.719)
O5': (6.432,86.010,57.349)
C3': (8.995,87.302,57.729)
C1': (8.528,88.874,56.026)
O4': (8.085,87.603,55.582)
C5': (7.571,85.488,56.635)
P: (5.100,85.155,57.519)
O2: (8.612,91.602,56.082)
C4': (8.609,86.571,56.455)
C2': (9.471,88.654,57.213)
O2': (10.804,88.627,56.738)
N1: (7.347,89.714,56.302)
N3: (6.402,91.887,56.493)
N4: (4.166,92.133,56.900)
C6: (6.125,89.151,56.553)
C5: (5.043,89.912,56.764)
O3': (10.019,86.591,58.412)
OP1: (4.340,85.222,56.250)
OP2: (5.455,83.831,58.087)
C4: (5.213,91.326,56.719)
O5': (6.432,86.010,57.349)
C3': (8.995,87.302,57.729)
C1': (8.528,88.874,56.026)
O4': (8.085,87.603,55.582)
C5': (7.571,85.488,56.635)
P: (5.100,85.155,57.519)
O2: (8.612,91.602,56.082)
C4': (8.609,86.571,56.455)
C2': (9.471,88.654,57.213)
O2': (10.804,88.627,56.738)
N1: (7.347,89.714,56.302)
N3: (6.402,91.887,56.493)
N4: (4.166,92.133,56.900)
C6: (6.125,89.151,56.553)
C5: (5.043,89.912,56.764)
O3': (10.019,86.591,58.412)
OP1: (11.213,85.768,60.427)
OP2: (8.680,86.160,60.491)
C3': (10.870,90.400,62.043)
C1': (9.792,91.811,60.482)
C5': (11.536,88.712,60.257)
O4': (10.537,90.845,59.760)
C8: (7.805,90.228,60.430)
O2': (11.268,92.825,62.091)
C6: (4.990,92.241,59.877)
C5: (6.202,91.574,60.088)
C4: (7.346,92.346,60.129)
P: (10.031,86.557,60.014)
C4': (11.445,90.162,60.657)
C2': (10.299,91.808,61.929)
C2: (6.219,94.198,59.782)
N1: (5.032,93.583,59.719)
N3: (7.426,93.678,59.983)
N6: (3.805,91.624,59.827)
N7: (6.506,90.236,60.278)
N9: (8.379,91.471,60.354)
O5': (10.256,88.077,60.422)
O3': (11.887,90.293,63.029)
OP2: (8.680,86.160,60.491)
C3': (10.870,90.400,62.043)
C1': (9.792,91.811,60.482)
C5': (11.536,88.712,60.257)
O4': (10.537,90.845,59.760)
C8: (7.805,90.228,60.430)
O2': (11.268,92.825,62.091)
C6: (4.990,92.241,59.877)
C5: (6.202,91.574,60.088)
C4: (7.346,92.346,60.129)
P: (10.031,86.557,60.014)
C4': (11.445,90.162,60.657)
C2': (10.299,91.808,61.929)
C2: (6.219,94.198,59.782)
N1: (5.032,93.583,59.719)
N3: (7.426,93.678,59.983)
N6: (3.805,91.624,59.827)
N7: (6.506,90.236,60.278)
N9: (8.379,91.471,60.354)
O5': (10.256,88.077,60.422)
O3': (11.887,90.293,63.029)
Image (generated by PyMOL):