Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1L3Z:A5:A6
Extra
PDB:
ATOM 1 O3' A A 4 8.870 13.484 -3.909 1.00 29.46 O
ATOM 2 P C A 5 10.201 14.363 -4.125 1.00 32.48 P
ATOM 3 OP1 C A 5 11.298 13.447 -4.536 1.00 34.30 O
ATOM 4 OP2 C A 5 10.371 15.213 -2.920 1.00 33.21 O
ATOM 5 O5' C A 5 9.842 15.319 -5.350 1.00 29.42 O
ATOM 6 C5' C A 5 9.561 14.771 -6.630 1.00 28.43 C
ATOM 7 C4' C A 5 8.880 15.790 -7.506 1.00 29.22 C
ATOM 8 O4' C A 5 7.611 16.179 -6.919 1.00 28.95 O
ATOM 9 C3' C A 5 9.596 17.118 -7.687 1.00 29.94 C
ATOM 10 O3' C A 5 10.625 17.019 -8.659 1.00 32.96 O
ATOM 11 C2' C A 5 8.464 18.006 -8.178 1.00 28.77 C
ATOM 12 O2' C A 5 8.174 17.811 -9.547 1.00 30.09 O
ATOM 13 C1' C A 5 7.299 17.507 -7.318 1.00 29.06 C
ATOM 14 N1 C A 5 7.143 18.345 -6.119 1.00 27.53 N
ATOM 15 C2 C A 5 6.329 19.474 -6.205 1.00 26.88 C
ATOM 16 O2 C A 5 5.732 19.697 -7.268 1.00 25.97 O
ATOM 17 N3 C A 5 6.208 20.290 -5.135 1.00 27.11 N
ATOM 18 C4 C A 5 6.857 20.008 -4.008 1.00 27.52 C
ATOM 19 N4 C A 5 6.717 20.854 -2.982 1.00 28.24 N
ATOM 20 C5 C A 5 7.681 18.847 -3.882 1.00 27.27 C
ATOM 21 C6 C A 5 7.791 18.049 -4.953 1.00 25.25 C
ATOM 22 P A A 6 11.896 17.994 -8.575 1.00 35.94 P
ATOM 23 OP1 A A 6 12.850 17.538 -9.614 1.00 37.86 O
ATOM 24 OP2 A A 6 12.332 18.062 -7.156 1.00 34.84 O
ATOM 25 O5' A A 6 11.322 19.417 -9.004 1.00 32.98 O
TER
ATOM 1 O3' C B 5 10.625 17.019 -8.659 1.00 32.96 O
ATOM 2 P A B 6 11.896 17.994 -8.575 1.00 35.94 P
ATOM 3 OP1 A B 6 12.850 17.538 -9.614 1.00 37.86 O
ATOM 4 OP2 A B 6 12.332 18.062 -7.156 1.00 34.84 O
ATOM 5 O5' A B 6 11.322 19.417 -9.004 1.00 32.98 O
ATOM 6 C5' A B 6 10.758 19.614 -10.296 1.00 34.04 C
ATOM 7 C4' A B 6 10.079 20.961 -10.375 1.00 36.61 C
ATOM 8 O4' A B 6 8.966 21.021 -9.443 1.00 36.69 O
ATOM 9 C3' A B 6 10.930 22.155 -9.978 1.00 36.90 C
ATOM 10 O3' A B 6 11.902 22.509 -10.960 1.00 40.00 O
ATOM 11 C2' A B 6 9.870 23.209 -9.686 1.00 36.65 C
ATOM 12 O2' A B 6 9.335 23.794 -10.856 1.00 37.93 O
ATOM 13 C1' A B 6 8.796 22.361 -8.998 1.00 35.00 C
ATOM 14 N9 A B 6 8.953 22.383 -7.549 1.00 32.72 N
ATOM 15 C8 A B 6 9.722 21.554 -6.771 1.00 31.70 C
ATOM 16 N7 A B 6 9.669 21.830 -5.494 1.00 31.44 N
ATOM 17 C5 A B 6 8.804 22.915 -5.424 1.00 30.98 C
ATOM 18 C6 A B 6 8.333 23.678 -4.346 1.00 31.36 C
ATOM 19 N6 A B 6 8.686 23.460 -3.073 1.00 32.46 N
ATOM 20 N1 A B 6 7.477 24.689 -4.619 1.00 31.46 N
ATOM 21 C2 A B 6 7.130 24.909 -5.892 1.00 31.15 C
ATOM 22 N3 A B 6 7.509 24.264 -6.991 1.00 32.16 N
ATOM 23 C4 A B 6 8.356 23.265 -6.683 1.00 32.29 C
TER
ATOM 2 P C A 5 10.201 14.363 -4.125 1.00 32.48 P
ATOM 3 OP1 C A 5 11.298 13.447 -4.536 1.00 34.30 O
ATOM 4 OP2 C A 5 10.371 15.213 -2.920 1.00 33.21 O
ATOM 5 O5' C A 5 9.842 15.319 -5.350 1.00 29.42 O
ATOM 6 C5' C A 5 9.561 14.771 -6.630 1.00 28.43 C
ATOM 7 C4' C A 5 8.880 15.790 -7.506 1.00 29.22 C
ATOM 8 O4' C A 5 7.611 16.179 -6.919 1.00 28.95 O
ATOM 9 C3' C A 5 9.596 17.118 -7.687 1.00 29.94 C
ATOM 10 O3' C A 5 10.625 17.019 -8.659 1.00 32.96 O
ATOM 11 C2' C A 5 8.464 18.006 -8.178 1.00 28.77 C
ATOM 12 O2' C A 5 8.174 17.811 -9.547 1.00 30.09 O
ATOM 13 C1' C A 5 7.299 17.507 -7.318 1.00 29.06 C
ATOM 14 N1 C A 5 7.143 18.345 -6.119 1.00 27.53 N
ATOM 15 C2 C A 5 6.329 19.474 -6.205 1.00 26.88 C
ATOM 16 O2 C A 5 5.732 19.697 -7.268 1.00 25.97 O
ATOM 17 N3 C A 5 6.208 20.290 -5.135 1.00 27.11 N
ATOM 18 C4 C A 5 6.857 20.008 -4.008 1.00 27.52 C
ATOM 19 N4 C A 5 6.717 20.854 -2.982 1.00 28.24 N
ATOM 20 C5 C A 5 7.681 18.847 -3.882 1.00 27.27 C
ATOM 21 C6 C A 5 7.791 18.049 -4.953 1.00 25.25 C
ATOM 22 P A A 6 11.896 17.994 -8.575 1.00 35.94 P
ATOM 23 OP1 A A 6 12.850 17.538 -9.614 1.00 37.86 O
ATOM 24 OP2 A A 6 12.332 18.062 -7.156 1.00 34.84 O
ATOM 25 O5' A A 6 11.322 19.417 -9.004 1.00 32.98 O
TER
ATOM 1 O3' C B 5 10.625 17.019 -8.659 1.00 32.96 O
ATOM 2 P A B 6 11.896 17.994 -8.575 1.00 35.94 P
ATOM 3 OP1 A B 6 12.850 17.538 -9.614 1.00 37.86 O
ATOM 4 OP2 A B 6 12.332 18.062 -7.156 1.00 34.84 O
ATOM 5 O5' A B 6 11.322 19.417 -9.004 1.00 32.98 O
ATOM 6 C5' A B 6 10.758 19.614 -10.296 1.00 34.04 C
ATOM 7 C4' A B 6 10.079 20.961 -10.375 1.00 36.61 C
ATOM 8 O4' A B 6 8.966 21.021 -9.443 1.00 36.69 O
ATOM 9 C3' A B 6 10.930 22.155 -9.978 1.00 36.90 C
ATOM 10 O3' A B 6 11.902 22.509 -10.960 1.00 40.00 O
ATOM 11 C2' A B 6 9.870 23.209 -9.686 1.00 36.65 C
ATOM 12 O2' A B 6 9.335 23.794 -10.856 1.00 37.93 O
ATOM 13 C1' A B 6 8.796 22.361 -8.998 1.00 35.00 C
ATOM 14 N9 A B 6 8.953 22.383 -7.549 1.00 32.72 N
ATOM 15 C8 A B 6 9.722 21.554 -6.771 1.00 31.70 C
ATOM 16 N7 A B 6 9.669 21.830 -5.494 1.00 31.44 N
ATOM 17 C5 A B 6 8.804 22.915 -5.424 1.00 30.98 C
ATOM 18 C6 A B 6 8.333 23.678 -4.346 1.00 31.36 C
ATOM 19 N6 A B 6 8.686 23.460 -3.073 1.00 32.46 N
ATOM 20 N1 A B 6 7.477 24.689 -4.619 1.00 31.46 N
ATOM 21 C2 A B 6 7.130 24.909 -5.892 1.00 31.15 C
ATOM 22 N3 A B 6 7.509 24.264 -6.991 1.00 32.16 N
ATOM 23 C4 A B 6 8.356 23.265 -6.683 1.00 32.29 C
TER
Atoms:
C2: (6.329,19.474,-6.205)
OP1: (11.298,13.447,-4.536)
OP2: (10.371,15.213,-2.920)
C4: (6.857,20.008,-4.008)
O5': (9.842,15.319,-5.350)
C3': (9.596,17.118,-7.687)
C1': (7.299,17.507,-7.318)
O4': (7.611,16.179,-6.919)
C5': (9.561,14.771,-6.630)
P: (10.201,14.363,-4.125)
O2: (5.732,19.697,-7.268)
C4': (8.880,15.790,-7.506)
C2': (8.464,18.006,-8.178)
O2': (8.174,17.811,-9.547)
N1: (7.143,18.345,-6.119)
N3: (6.208,20.290,-5.135)
N4: (6.717,20.854,-2.982)
C6: (7.791,18.049,-4.953)
C5: (7.681,18.847,-3.882)
O3': (10.625,17.019,-8.659)
OP1: (11.298,13.447,-4.536)
OP2: (10.371,15.213,-2.920)
C4: (6.857,20.008,-4.008)
O5': (9.842,15.319,-5.350)
C3': (9.596,17.118,-7.687)
C1': (7.299,17.507,-7.318)
O4': (7.611,16.179,-6.919)
C5': (9.561,14.771,-6.630)
P: (10.201,14.363,-4.125)
O2: (5.732,19.697,-7.268)
C4': (8.880,15.790,-7.506)
C2': (8.464,18.006,-8.178)
O2': (8.174,17.811,-9.547)
N1: (7.143,18.345,-6.119)
N3: (6.208,20.290,-5.135)
N4: (6.717,20.854,-2.982)
C6: (7.791,18.049,-4.953)
C5: (7.681,18.847,-3.882)
O3': (10.625,17.019,-8.659)
OP1: (12.850,17.538,-9.614)
OP2: (12.332,18.062,-7.156)
C3': (10.930,22.155,-9.978)
C1': (8.796,22.361,-8.998)
C5': (10.758,19.614,-10.296)
O4': (8.966,21.021,-9.443)
C8: (9.722,21.554,-6.771)
O2': (9.335,23.794,-10.856)
C6: (8.333,23.678,-4.346)
C5: (8.804,22.915,-5.424)
C4: (8.356,23.265,-6.683)
P: (11.896,17.994,-8.575)
C4': (10.079,20.961,-10.375)
C2': (9.870,23.209,-9.686)
C2: (7.130,24.909,-5.892)
N1: (7.477,24.689,-4.619)
N3: (7.509,24.264,-6.991)
N6: (8.686,23.460,-3.073)
N7: (9.669,21.830,-5.494)
N9: (8.953,22.383,-7.549)
O5': (11.322,19.417,-9.004)
O3': (11.902,22.509,-10.960)
OP2: (12.332,18.062,-7.156)
C3': (10.930,22.155,-9.978)
C1': (8.796,22.361,-8.998)
C5': (10.758,19.614,-10.296)
O4': (8.966,21.021,-9.443)
C8: (9.722,21.554,-6.771)
O2': (9.335,23.794,-10.856)
C6: (8.333,23.678,-4.346)
C5: (8.804,22.915,-5.424)
C4: (8.356,23.265,-6.683)
P: (11.896,17.994,-8.575)
C4': (10.079,20.961,-10.375)
C2': (9.870,23.209,-9.686)
C2: (7.130,24.909,-5.892)
N1: (7.477,24.689,-4.619)
N3: (7.509,24.264,-6.991)
N6: (8.686,23.460,-3.073)
N7: (9.669,21.830,-5.494)
N9: (8.953,22.383,-7.549)
O5': (11.322,19.417,-9.004)
O3': (11.902,22.509,-10.960)
Image (generated by PyMOL):