ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MXH:R9:R10

Extra

PDB:
ATOM 1 O3' A A 8 -6.652 4.690 25.457 1.00 64.81 O
ATOM 2 P C A 9 -5.253 3.919 25.339 1.00 63.02 P
ATOM 3 OP1 C A 9 -4.219 4.773 25.970 1.00 68.60 O
ATOM 4 OP2 C A 9 -5.095 3.486 23.932 1.00 56.18 O
ATOM 5 O5' C A 9 -5.444 2.623 26.262 1.00 63.42 O
ATOM 6 C5' C A 9 -5.378 2.712 27.690 1.00 69.97 C
ATOM 7 C4' C A 9 -5.710 1.372 28.327 1.00 70.13 C
ATOM 8 O4' C A 9 -7.028 0.936 27.910 1.00 66.89 O
ATOM 9 C3' C A 9 -4.793 0.232 27.917 1.00 67.68 C
ATOM 10 O3' C A 9 -3.629 0.245 28.732 1.00 73.56 O
ATOM 11 C2' C A 9 -5.663 -1.001 28.158 1.00 66.31 C
ATOM 12 O2' C A 9 -5.621 -1.459 29.498 1.00 71.37 O
ATOM 13 C1' C A 9 -7.062 -0.482 27.819 1.00 64.35 C
ATOM 14 N1 C A 9 -7.570 -0.898 26.454 1.00 58.04 N
ATOM 15 C2 C A 9 -8.180 -2.155 26.275 1.00 56.19 C
ATOM 16 O2 C A 9 -8.297 -2.922 27.239 1.00 59.00 O
ATOM 17 N3 C A 9 -8.631 -2.499 25.036 1.00 51.57 N
ATOM 18 C4 C A 9 -8.494 -1.650 24.010 1.00 50.15 C
ATOM 19 N4 C A 9 -8.948 -2.025 22.810 1.00 46.76 N
ATOM 20 C5 C A 9 -7.877 -0.372 24.169 1.00 51.96 C
ATOM 21 C6 C A 9 -7.437 -0.044 25.391 1.00 55.11 C
ATOM 22 P A A 10 -2.174 0.197 28.066 1.00 73.36 P
ATOM 23 OP1 A A 10 -1.177 0.457 29.129 1.00 80.02 O
ATOM 24 OP2 A A 10 -2.193 1.044 26.853 1.00 71.53 O
ATOM 25 O5' A A 10 -2.046 -1.325 27.594 1.00 71.33 O
TER

ATOM 1 O3' C B 9 -3.629 0.245 28.732 1.00 73.56 O
ATOM 2 P A B 10 -2.174 0.197 28.066 1.00 73.36 P
ATOM 3 OP1 A B 10 -1.177 0.457 29.129 1.00 80.02 O
ATOM 4 OP2 A B 10 -2.193 1.044 26.853 1.00 71.53 O
ATOM 5 O5' A B 10 -2.046 -1.325 27.594 1.00 71.33 O
ATOM 6 C5' A B 10 -2.133 -2.398 28.529 1.00 74.14 C
ATOM 7 C4' A B 10 -2.403 -3.700 27.803 1.00 72.73 C
ATOM 8 O4' A B 10 -3.761 -3.693 27.294 1.00 69.75 O
ATOM 9 C3' A B 10 -1.564 -3.931 26.554 1.00 71.13 C
ATOM 10 O3' A B 10 -0.276 -4.429 26.873 1.00 75.77 O
ATOM 11 C2' A B 10 -2.420 -4.943 25.802 1.00 68.27 C
ATOM 12 O2' A B 10 -2.327 -6.252 26.333 1.00 72.04 O
ATOM 13 C1' A B 10 -3.811 -4.373 26.050 1.00 65.60 C
ATOM 14 N9 A B 10 -4.264 -3.453 25.001 1.00 61.89 N
ATOM 15 C8 A B 10 -4.051 -2.102 24.926 1.00 61.22 C
ATOM 16 N7 A B 10 -4.579 -1.535 23.864 1.00 57.08 N
ATOM 17 C5 A B 10 -5.181 -2.586 23.191 1.00 54.74 C
ATOM 18 C6 A B 10 -5.916 -2.654 21.986 1.00 51.83 C
ATOM 19 N6 A B 10 -6.170 -1.586 21.224 1.00 51.30 N
ATOM 20 N1 A B 10 -6.384 -3.864 21.592 1.00 50.46 N
ATOM 21 C2 A B 10 -6.126 -4.936 22.355 1.00 52.32 C
ATOM 22 N3 A B 10 -5.446 -4.995 23.504 1.00 56.40 N
ATOM 23 C4 A B 10 -4.996 -3.778 23.874 1.00 57.38 C
ATOM 24 P G B 11 0.995 -3.992 25.998 1.00 77.57 P
ATOM 25 OP1 G B 11 2.199 -4.241 26.827 1.00 84.38 O
ATOM 26 OP2 G B 11 0.757 -2.639 25.440 1.00 73.69 O
ATOM 27 O5' G B 11 0.984 -5.048 24.795 1.00 74.04 O
TER

Atoms:
C2: (-8.180,-2.155,26.275)
OP1: (-4.219,4.773,25.970)
OP2: (-5.095,3.486,23.932)
C4: (-8.494,-1.650,24.010)
O5': (-5.444,2.623,26.262)
C3': (-4.793,0.232,27.917)
C1': (-7.062,-0.482,27.819)
O4': (-7.028,0.936,27.910)
C5': (-5.378,2.712,27.690)
P: (-5.253,3.919,25.339)
O2: (-8.297,-2.922,27.239)
C4': (-5.710,1.372,28.327)
C2': (-5.663,-1.001,28.158)
O2': (-5.621,-1.459,29.498)
N1: (-7.570,-0.898,26.454)
N3: (-8.631,-2.499,25.036)
N4: (-8.948,-2.025,22.810)
C6: (-7.437,-0.044,25.391)
C5: (-7.877,-0.372,24.169)
O3': (-3.629,0.245,28.732)
OP1: (-1.177,0.457,29.129)
OP2: (-2.193,1.044,26.853)
C3': (-1.564,-3.931,26.554)
C1': (-3.811,-4.373,26.050)
C5': (-2.133,-2.398,28.529)
O4': (-3.761,-3.693,27.294)
C8: (-4.051,-2.102,24.926)
O2': (-2.327,-6.252,26.333)
C6: (-5.916,-2.654,21.986)
C5: (-5.181,-2.586,23.191)
C4: (-4.996,-3.778,23.874)
P: (-2.174,0.197,28.066)
C4': (-2.403,-3.700,27.803)
C2': (-2.420,-4.943,25.802)
C2: (-6.126,-4.936,22.355)
N1: (-6.384,-3.864,21.592)
N3: (-5.446,-4.995,23.504)
N6: (-6.170,-1.586,21.224)
N7: (-4.579,-1.535,23.864)
N9: (-4.264,-3.453,25.001)
O5': (-2.046,-1.325,27.594)
O3': (-0.276,-4.429,26.873)
Image (generated by PyMOL):
PyMOL image
show in jmol