Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2565:2566
Extra
PDB:
ATOM 1 O3' C A 564 -57.163 -3.993 45.949 1.00 80.28 O
ATOM 2 P C A 565 -55.713 -3.911 45.258 1.00 66.88 P
ATOM 3 OP1 C A 565 -55.220 -5.289 45.109 1.00 67.33 O
ATOM 4 OP2 C A 565 -54.909 -2.955 46.033 1.00 65.79 O
ATOM 5 O5' C A 565 -56.054 -3.288 43.846 1.00 67.48 O
ATOM 6 C5' C A 565 -55.887 -1.908 43.589 1.00 66.99 C
ATOM 7 C4' C A 565 -56.000 -1.656 42.124 1.00 67.71 C
ATOM 8 O4' C A 565 -57.189 -2.301 41.626 1.00 68.75 O
ATOM 9 C3' C A 565 -56.134 -0.214 41.678 1.00 67.47 C
ATOM 10 O3' C A 565 -54.878 0.436 41.604 1.00 66.74 O
ATOM 11 C2' C A 565 -56.819 -0.350 40.313 1.00 68.57 C
ATOM 12 O2' C A 565 -55.859 -0.586 39.294 1.00 68.81 O
ATOM 13 C1' C A 565 -57.650 -1.631 40.482 1.00 69.33 C
ATOM 14 N1 C A 565 -59.096 -1.371 40.631 1.00 69.82 N
ATOM 15 C2 C A 565 -59.874 -0.991 39.517 1.00 70.68 C
ATOM 16 O2 C A 565 -59.394 -0.822 38.387 1.00 71.05 O
ATOM 17 N3 C A 565 -61.192 -0.782 39.682 1.00 71.16 N
ATOM 18 C4 C A 565 -61.757 -0.953 40.878 1.00 70.83 C
ATOM 19 N4 C A 565 -63.074 -0.712 40.932 1.00 71.39 N
ATOM 20 C5 C A 565 -61.005 -1.362 42.028 1.00 69.97 C
ATOM 21 C6 C A 565 -59.692 -1.564 41.852 1.00 69.50 C
ATOM 22 P A A 566 -54.682 1.932 42.154 1.00 72.06 P
ATOM 23 OP1 A A 566 -53.303 2.332 41.834 1.00 71.53 O
ATOM 24 OP2 A A 566 -55.113 1.942 43.563 1.00 71.51 O
ATOM 25 O5' A A 566 -55.699 2.772 41.284 1.00 72.68 O
TER
ATOM 1 O3' C B 565 -54.878 0.436 41.604 1.00 66.74 O
ATOM 2 P A B 566 -54.682 1.932 42.154 1.00 72.06 P
ATOM 3 OP1 A B 566 -53.303 2.332 41.834 1.00 71.53 O
ATOM 4 OP2 A B 566 -55.113 1.942 43.563 1.00 71.51 O
ATOM 5 O5' A B 566 -55.699 2.772 41.284 1.00 72.68 O
ATOM 6 C5' A B 566 -55.443 3.026 39.919 1.00 73.25 C
ATOM 7 C4' A B 566 -56.678 3.507 39.196 1.00 74.05 C
ATOM 8 O4' A B 566 -57.722 2.508 39.249 1.00 74.82 O
ATOM 9 C3' A B 566 -57.338 4.748 39.752 1.00 73.64 C
ATOM 10 O3' A B 566 -56.657 5.921 39.377 1.00 73.20 O
ATOM 11 C2' A B 566 -58.739 4.661 39.173 1.00 74.66 C
ATOM 12 O2' A B 566 -58.731 5.118 37.830 1.00 75.31 O
ATOM 13 C1' A B 566 -58.982 3.149 39.163 1.00 75.26 C
ATOM 14 N9 A B 566 -59.834 2.686 40.281 1.00 75.17 N
ATOM 15 C8 A B 566 -59.389 1.900 41.308 1.00 74.65 C
ATOM 16 N7 A B 566 -60.303 1.562 42.171 1.00 74.73 N
ATOM 17 C5 A B 566 -61.450 2.139 41.669 1.00 75.38 C
ATOM 18 C6 A B 566 -62.764 2.122 42.170 1.00 75.78 C
ATOM 19 N6 A B 566 -63.058 1.474 43.304 1.00 75.54 N
ATOM 20 N1 A B 566 -63.723 2.778 41.472 1.00 76.46 N
ATOM 21 C2 A B 566 -63.342 3.400 40.344 1.00 76.70 C
ATOM 22 N3 A B 566 -62.134 3.494 39.767 1.00 76.37 N
ATOM 23 C4 A B 566 -61.198 2.829 40.492 1.00 75.68 C
ATOM 24 P G B 567 -56.481 7.121 40.429 1.00 70.61 P
ATOM 25 OP1 G B 567 -55.567 8.120 39.800 1.00 70.29 O
ATOM 26 OP2 G B 567 -56.089 6.515 41.735 1.00 69.89 O
ATOM 27 O5' G B 567 -57.962 7.712 40.539 1.00 71.07 O
TER
ATOM 2 P C A 565 -55.713 -3.911 45.258 1.00 66.88 P
ATOM 3 OP1 C A 565 -55.220 -5.289 45.109 1.00 67.33 O
ATOM 4 OP2 C A 565 -54.909 -2.955 46.033 1.00 65.79 O
ATOM 5 O5' C A 565 -56.054 -3.288 43.846 1.00 67.48 O
ATOM 6 C5' C A 565 -55.887 -1.908 43.589 1.00 66.99 C
ATOM 7 C4' C A 565 -56.000 -1.656 42.124 1.00 67.71 C
ATOM 8 O4' C A 565 -57.189 -2.301 41.626 1.00 68.75 O
ATOM 9 C3' C A 565 -56.134 -0.214 41.678 1.00 67.47 C
ATOM 10 O3' C A 565 -54.878 0.436 41.604 1.00 66.74 O
ATOM 11 C2' C A 565 -56.819 -0.350 40.313 1.00 68.57 C
ATOM 12 O2' C A 565 -55.859 -0.586 39.294 1.00 68.81 O
ATOM 13 C1' C A 565 -57.650 -1.631 40.482 1.00 69.33 C
ATOM 14 N1 C A 565 -59.096 -1.371 40.631 1.00 69.82 N
ATOM 15 C2 C A 565 -59.874 -0.991 39.517 1.00 70.68 C
ATOM 16 O2 C A 565 -59.394 -0.822 38.387 1.00 71.05 O
ATOM 17 N3 C A 565 -61.192 -0.782 39.682 1.00 71.16 N
ATOM 18 C4 C A 565 -61.757 -0.953 40.878 1.00 70.83 C
ATOM 19 N4 C A 565 -63.074 -0.712 40.932 1.00 71.39 N
ATOM 20 C5 C A 565 -61.005 -1.362 42.028 1.00 69.97 C
ATOM 21 C6 C A 565 -59.692 -1.564 41.852 1.00 69.50 C
ATOM 22 P A A 566 -54.682 1.932 42.154 1.00 72.06 P
ATOM 23 OP1 A A 566 -53.303 2.332 41.834 1.00 71.53 O
ATOM 24 OP2 A A 566 -55.113 1.942 43.563 1.00 71.51 O
ATOM 25 O5' A A 566 -55.699 2.772 41.284 1.00 72.68 O
TER
ATOM 1 O3' C B 565 -54.878 0.436 41.604 1.00 66.74 O
ATOM 2 P A B 566 -54.682 1.932 42.154 1.00 72.06 P
ATOM 3 OP1 A B 566 -53.303 2.332 41.834 1.00 71.53 O
ATOM 4 OP2 A B 566 -55.113 1.942 43.563 1.00 71.51 O
ATOM 5 O5' A B 566 -55.699 2.772 41.284 1.00 72.68 O
ATOM 6 C5' A B 566 -55.443 3.026 39.919 1.00 73.25 C
ATOM 7 C4' A B 566 -56.678 3.507 39.196 1.00 74.05 C
ATOM 8 O4' A B 566 -57.722 2.508 39.249 1.00 74.82 O
ATOM 9 C3' A B 566 -57.338 4.748 39.752 1.00 73.64 C
ATOM 10 O3' A B 566 -56.657 5.921 39.377 1.00 73.20 O
ATOM 11 C2' A B 566 -58.739 4.661 39.173 1.00 74.66 C
ATOM 12 O2' A B 566 -58.731 5.118 37.830 1.00 75.31 O
ATOM 13 C1' A B 566 -58.982 3.149 39.163 1.00 75.26 C
ATOM 14 N9 A B 566 -59.834 2.686 40.281 1.00 75.17 N
ATOM 15 C8 A B 566 -59.389 1.900 41.308 1.00 74.65 C
ATOM 16 N7 A B 566 -60.303 1.562 42.171 1.00 74.73 N
ATOM 17 C5 A B 566 -61.450 2.139 41.669 1.00 75.38 C
ATOM 18 C6 A B 566 -62.764 2.122 42.170 1.00 75.78 C
ATOM 19 N6 A B 566 -63.058 1.474 43.304 1.00 75.54 N
ATOM 20 N1 A B 566 -63.723 2.778 41.472 1.00 76.46 N
ATOM 21 C2 A B 566 -63.342 3.400 40.344 1.00 76.70 C
ATOM 22 N3 A B 566 -62.134 3.494 39.767 1.00 76.37 N
ATOM 23 C4 A B 566 -61.198 2.829 40.492 1.00 75.68 C
ATOM 24 P G B 567 -56.481 7.121 40.429 1.00 70.61 P
ATOM 25 OP1 G B 567 -55.567 8.120 39.800 1.00 70.29 O
ATOM 26 OP2 G B 567 -56.089 6.515 41.735 1.00 69.89 O
ATOM 27 O5' G B 567 -57.962 7.712 40.539 1.00 71.07 O
TER
Atoms:
C2: (-59.874,-0.991,39.517)
OP1: (-55.220,-5.289,45.109)
OP2: (-54.909,-2.955,46.033)
C4: (-61.757,-0.953,40.878)
O5': (-56.054,-3.288,43.846)
C3': (-56.134,-0.214,41.678)
C1': (-57.650,-1.631,40.482)
O4': (-57.189,-2.301,41.626)
C5': (-55.887,-1.908,43.589)
P: (-55.713,-3.911,45.258)
O2: (-59.394,-0.822,38.387)
C4': (-56.000,-1.656,42.124)
C2': (-56.819,-0.350,40.313)
O2': (-55.859,-0.586,39.294)
N1: (-59.096,-1.371,40.631)
N3: (-61.192,-0.782,39.682)
N4: (-63.074,-0.712,40.932)
C6: (-59.692,-1.564,41.852)
C5: (-61.005,-1.362,42.028)
O3': (-54.878,0.436,41.604)
OP1: (-55.220,-5.289,45.109)
OP2: (-54.909,-2.955,46.033)
C4: (-61.757,-0.953,40.878)
O5': (-56.054,-3.288,43.846)
C3': (-56.134,-0.214,41.678)
C1': (-57.650,-1.631,40.482)
O4': (-57.189,-2.301,41.626)
C5': (-55.887,-1.908,43.589)
P: (-55.713,-3.911,45.258)
O2: (-59.394,-0.822,38.387)
C4': (-56.000,-1.656,42.124)
C2': (-56.819,-0.350,40.313)
O2': (-55.859,-0.586,39.294)
N1: (-59.096,-1.371,40.631)
N3: (-61.192,-0.782,39.682)
N4: (-63.074,-0.712,40.932)
C6: (-59.692,-1.564,41.852)
C5: (-61.005,-1.362,42.028)
O3': (-54.878,0.436,41.604)
OP1: (-53.303,2.332,41.834)
OP2: (-55.113,1.942,43.563)
C3': (-57.338,4.748,39.752)
C1': (-58.982,3.149,39.163)
C5': (-55.443,3.026,39.919)
O4': (-57.722,2.508,39.249)
C8: (-59.389,1.900,41.308)
O2': (-58.731,5.118,37.830)
C6: (-62.764,2.122,42.170)
C5: (-61.450,2.139,41.669)
C4: (-61.198,2.829,40.492)
P: (-54.682,1.932,42.154)
C4': (-56.678,3.507,39.196)
C2': (-58.739,4.661,39.173)
C2: (-63.342,3.400,40.344)
N1: (-63.723,2.778,41.472)
N3: (-62.134,3.494,39.767)
N6: (-63.058,1.474,43.304)
N7: (-60.303,1.562,42.171)
N9: (-59.834,2.686,40.281)
O5': (-55.699,2.772,41.284)
O3': (-56.657,5.921,39.377)
OP2: (-55.113,1.942,43.563)
C3': (-57.338,4.748,39.752)
C1': (-58.982,3.149,39.163)
C5': (-55.443,3.026,39.919)
O4': (-57.722,2.508,39.249)
C8: (-59.389,1.900,41.308)
O2': (-58.731,5.118,37.830)
C6: (-62.764,2.122,42.170)
C5: (-61.450,2.139,41.669)
C4: (-61.198,2.829,40.492)
P: (-54.682,1.932,42.154)
C4': (-56.678,3.507,39.196)
C2': (-58.739,4.661,39.173)
C2: (-63.342,3.400,40.344)
N1: (-63.723,2.778,41.472)
N3: (-62.134,3.494,39.767)
N6: (-63.058,1.474,43.304)
N7: (-60.303,1.562,42.171)
N9: (-59.834,2.686,40.281)
O5': (-55.699,2.772,41.284)
O3': (-56.657,5.921,39.377)
Image (generated by PyMOL):