Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01044:01045
Extra
PDB:
ATOM 1 O3' C A1043 30.145 91.790 108.593 1.00 35.42 O
ATOM 2 P C A1044 29.516 91.113 107.287 1.00 36.35 P
ATOM 3 OP1 C A1044 29.049 89.770 107.704 1.00 35.91 O
ATOM 4 OP2 C A1044 30.480 91.238 106.177 1.00 36.82 O
ATOM 5 O5' C A1044 28.254 92.021 106.947 1.00 36.71 O
ATOM 6 C5' C A1044 27.115 92.064 107.830 1.00 38.63 C
ATOM 7 C4' C A1044 26.052 92.991 107.286 1.00 39.56 C
ATOM 8 O4' C A1044 26.477 94.376 107.395 1.00 40.78 O
ATOM 9 C3' C A1044 25.703 92.822 105.817 1.00 37.93 C
ATOM 10 O3' C A1044 24.798 91.756 105.617 1.00 36.93 O
ATOM 11 C2' C A1044 25.063 94.159 105.494 1.00 39.14 C
ATOM 12 O2' C A1044 23.729 94.224 105.948 1.00 38.22 O
ATOM 13 C1' C A1044 25.940 95.116 106.310 1.00 41.88 C
ATOM 14 N1 C A1044 27.052 95.658 105.507 1.00 45.45 N
ATOM 15 C2 C A1044 26.785 96.695 104.608 1.00 47.57 C
ATOM 16 O2 C A1044 25.635 97.155 104.546 1.00 48.71 O
ATOM 17 N3 C A1044 27.784 97.173 103.832 1.00 48.52 N
ATOM 18 C4 C A1044 29.013 96.666 103.938 1.00 47.69 C
ATOM 19 N4 C A1044 29.961 97.172 103.148 1.00 47.77 N
ATOM 20 C5 C A1044 29.321 95.621 104.855 1.00 47.48 C
ATOM 21 C6 C A1044 28.321 95.153 105.615 1.00 46.97 C
ATOM 22 P A A1045 24.868 90.892 104.268 1.00 39.23 P
ATOM 23 OP1 A A1045 23.701 89.972 104.252 1.00 39.17 O
ATOM 24 OP2 A A1045 26.236 90.331 104.141 1.00 38.03 O
ATOM 25 O5' A A1045 24.670 91.979 103.125 1.00 37.63 O
TER
ATOM 1 O3' C B1044 24.798 91.756 105.617 1.00 36.93 O
ATOM 2 P A B1045 24.868 90.892 104.268 1.00 39.23 P
ATOM 3 OP1 A B1045 23.701 89.972 104.252 1.00 39.17 O
ATOM 4 OP2 A B1045 26.236 90.331 104.141 1.00 38.03 O
ATOM 5 O5' A B1045 24.670 91.979 103.125 1.00 37.63 O
ATOM 6 C5' A B1045 23.439 92.701 102.991 1.00 38.46 C
ATOM 7 C4' A B1045 23.591 93.757 101.932 1.00 40.40 C
ATOM 8 O4' A B1045 24.572 94.731 102.374 1.00 42.02 O
ATOM 9 C3' A B1045 24.138 93.234 100.617 1.00 39.85 C
ATOM 10 O3' A B1045 23.085 92.733 99.812 1.00 39.61 O
ATOM 11 C2' A B1045 24.804 94.468 100.026 1.00 41.11 C
ATOM 12 O2' A B1045 23.889 95.358 99.420 1.00 41.85 O
ATOM 13 C1' A B1045 25.382 95.127 101.282 1.00 41.13 C
ATOM 14 N9 A B1045 26.752 94.706 101.567 1.00 40.62 N
ATOM 15 C8 A B1045 27.164 93.697 102.397 1.00 40.87 C
ATOM 16 N7 A B1045 28.462 93.546 102.442 1.00 40.10 N
ATOM 17 C5 A B1045 28.938 94.521 101.583 1.00 39.91 C
ATOM 18 C6 A B1045 30.233 94.885 101.199 1.00 39.20 C
ATOM 19 N6 A B1045 31.332 94.270 101.627 1.00 39.68 N
ATOM 20 N1 A B1045 30.366 95.915 100.344 1.00 40.10 N
ATOM 21 C2 A B1045 29.262 96.522 99.897 1.00 41.73 C
ATOM 22 N3 A B1045 27.989 96.266 100.176 1.00 41.40 N
ATOM 23 C4 A B1045 27.895 95.245 101.040 1.00 40.69 C
ATOM 24 P G B1046 23.193 91.267 99.171 1.00 41.93 P
ATOM 25 OP1 G B1046 21.830 90.702 99.196 1.00 43.16 O
ATOM 26 OP2 G B1046 24.310 90.516 99.795 1.00 41.69 O
ATOM 27 O5' G B1046 23.570 91.538 97.651 1.00 41.75 O
TER
ATOM 2 P C A1044 29.516 91.113 107.287 1.00 36.35 P
ATOM 3 OP1 C A1044 29.049 89.770 107.704 1.00 35.91 O
ATOM 4 OP2 C A1044 30.480 91.238 106.177 1.00 36.82 O
ATOM 5 O5' C A1044 28.254 92.021 106.947 1.00 36.71 O
ATOM 6 C5' C A1044 27.115 92.064 107.830 1.00 38.63 C
ATOM 7 C4' C A1044 26.052 92.991 107.286 1.00 39.56 C
ATOM 8 O4' C A1044 26.477 94.376 107.395 1.00 40.78 O
ATOM 9 C3' C A1044 25.703 92.822 105.817 1.00 37.93 C
ATOM 10 O3' C A1044 24.798 91.756 105.617 1.00 36.93 O
ATOM 11 C2' C A1044 25.063 94.159 105.494 1.00 39.14 C
ATOM 12 O2' C A1044 23.729 94.224 105.948 1.00 38.22 O
ATOM 13 C1' C A1044 25.940 95.116 106.310 1.00 41.88 C
ATOM 14 N1 C A1044 27.052 95.658 105.507 1.00 45.45 N
ATOM 15 C2 C A1044 26.785 96.695 104.608 1.00 47.57 C
ATOM 16 O2 C A1044 25.635 97.155 104.546 1.00 48.71 O
ATOM 17 N3 C A1044 27.784 97.173 103.832 1.00 48.52 N
ATOM 18 C4 C A1044 29.013 96.666 103.938 1.00 47.69 C
ATOM 19 N4 C A1044 29.961 97.172 103.148 1.00 47.77 N
ATOM 20 C5 C A1044 29.321 95.621 104.855 1.00 47.48 C
ATOM 21 C6 C A1044 28.321 95.153 105.615 1.00 46.97 C
ATOM 22 P A A1045 24.868 90.892 104.268 1.00 39.23 P
ATOM 23 OP1 A A1045 23.701 89.972 104.252 1.00 39.17 O
ATOM 24 OP2 A A1045 26.236 90.331 104.141 1.00 38.03 O
ATOM 25 O5' A A1045 24.670 91.979 103.125 1.00 37.63 O
TER
ATOM 1 O3' C B1044 24.798 91.756 105.617 1.00 36.93 O
ATOM 2 P A B1045 24.868 90.892 104.268 1.00 39.23 P
ATOM 3 OP1 A B1045 23.701 89.972 104.252 1.00 39.17 O
ATOM 4 OP2 A B1045 26.236 90.331 104.141 1.00 38.03 O
ATOM 5 O5' A B1045 24.670 91.979 103.125 1.00 37.63 O
ATOM 6 C5' A B1045 23.439 92.701 102.991 1.00 38.46 C
ATOM 7 C4' A B1045 23.591 93.757 101.932 1.00 40.40 C
ATOM 8 O4' A B1045 24.572 94.731 102.374 1.00 42.02 O
ATOM 9 C3' A B1045 24.138 93.234 100.617 1.00 39.85 C
ATOM 10 O3' A B1045 23.085 92.733 99.812 1.00 39.61 O
ATOM 11 C2' A B1045 24.804 94.468 100.026 1.00 41.11 C
ATOM 12 O2' A B1045 23.889 95.358 99.420 1.00 41.85 O
ATOM 13 C1' A B1045 25.382 95.127 101.282 1.00 41.13 C
ATOM 14 N9 A B1045 26.752 94.706 101.567 1.00 40.62 N
ATOM 15 C8 A B1045 27.164 93.697 102.397 1.00 40.87 C
ATOM 16 N7 A B1045 28.462 93.546 102.442 1.00 40.10 N
ATOM 17 C5 A B1045 28.938 94.521 101.583 1.00 39.91 C
ATOM 18 C6 A B1045 30.233 94.885 101.199 1.00 39.20 C
ATOM 19 N6 A B1045 31.332 94.270 101.627 1.00 39.68 N
ATOM 20 N1 A B1045 30.366 95.915 100.344 1.00 40.10 N
ATOM 21 C2 A B1045 29.262 96.522 99.897 1.00 41.73 C
ATOM 22 N3 A B1045 27.989 96.266 100.176 1.00 41.40 N
ATOM 23 C4 A B1045 27.895 95.245 101.040 1.00 40.69 C
ATOM 24 P G B1046 23.193 91.267 99.171 1.00 41.93 P
ATOM 25 OP1 G B1046 21.830 90.702 99.196 1.00 43.16 O
ATOM 26 OP2 G B1046 24.310 90.516 99.795 1.00 41.69 O
ATOM 27 O5' G B1046 23.570 91.538 97.651 1.00 41.75 O
TER
Atoms:
C2: (26.785,96.695,104.608)
OP1: (29.049,89.770,107.704)
OP2: (30.480,91.238,106.177)
C4: (29.013,96.666,103.938)
O5': (28.254,92.021,106.947)
C3': (25.703,92.822,105.817)
C1': (25.940,95.116,106.310)
O4': (26.477,94.376,107.395)
C5': (27.115,92.064,107.830)
P: (29.516,91.113,107.287)
O2: (25.635,97.155,104.546)
C4': (26.052,92.991,107.286)
C2': (25.063,94.159,105.494)
O2': (23.729,94.224,105.948)
N1: (27.052,95.658,105.507)
N3: (27.784,97.173,103.832)
N4: (29.961,97.172,103.148)
C6: (28.321,95.153,105.615)
C5: (29.321,95.621,104.855)
O3': (24.798,91.756,105.617)
OP1: (29.049,89.770,107.704)
OP2: (30.480,91.238,106.177)
C4: (29.013,96.666,103.938)
O5': (28.254,92.021,106.947)
C3': (25.703,92.822,105.817)
C1': (25.940,95.116,106.310)
O4': (26.477,94.376,107.395)
C5': (27.115,92.064,107.830)
P: (29.516,91.113,107.287)
O2: (25.635,97.155,104.546)
C4': (26.052,92.991,107.286)
C2': (25.063,94.159,105.494)
O2': (23.729,94.224,105.948)
N1: (27.052,95.658,105.507)
N3: (27.784,97.173,103.832)
N4: (29.961,97.172,103.148)
C6: (28.321,95.153,105.615)
C5: (29.321,95.621,104.855)
O3': (24.798,91.756,105.617)
OP1: (23.701,89.972,104.252)
OP2: (26.236,90.331,104.141)
C3': (24.138,93.234,100.617)
C1': (25.382,95.127,101.282)
C5': (23.439,92.701,102.991)
O4': (24.572,94.731,102.374)
C8: (27.164,93.697,102.397)
O2': (23.889,95.358,99.420)
C6: (30.233,94.885,101.199)
C5: (28.938,94.521,101.583)
C4: (27.895,95.245,101.040)
P: (24.868,90.892,104.268)
C4': (23.591,93.757,101.932)
C2': (24.804,94.468,100.026)
C2: (29.262,96.522,99.897)
N1: (30.366,95.915,100.344)
N3: (27.989,96.266,100.176)
N6: (31.332,94.270,101.627)
N7: (28.462,93.546,102.442)
N9: (26.752,94.706,101.567)
O5': (24.670,91.979,103.125)
O3': (23.085,92.733,99.812)
OP2: (26.236,90.331,104.141)
C3': (24.138,93.234,100.617)
C1': (25.382,95.127,101.282)
C5': (23.439,92.701,102.991)
O4': (24.572,94.731,102.374)
C8: (27.164,93.697,102.397)
O2': (23.889,95.358,99.420)
C6: (30.233,94.885,101.199)
C5: (28.938,94.521,101.583)
C4: (27.895,95.245,101.040)
P: (24.868,90.892,104.268)
C4': (23.591,93.757,101.932)
C2': (24.804,94.468,100.026)
C2: (29.262,96.522,99.897)
N1: (30.366,95.915,100.344)
N3: (27.989,96.266,100.176)
N6: (31.332,94.270,101.627)
N7: (28.462,93.546,102.442)
N9: (26.752,94.706,101.567)
O5': (24.670,91.979,103.125)
O3': (23.085,92.733,99.812)
Image (generated by PyMOL):