Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01236:01237
Extra
PDB:
ATOM 1 O3' U A1235 4.114 86.615 58.892 1.00 69.23 O
ATOM 2 P C A1236 4.967 85.834 57.774 1.00 69.92 P
ATOM 3 OP1 C A1236 4.231 85.914 56.487 1.00 70.05 O
ATOM 4 OP2 C A1236 5.336 84.502 58.326 1.00 68.82 O
ATOM 5 O5' C A1236 6.291 86.706 57.634 1.00 69.46 O
ATOM 6 C5' C A1236 7.411 86.224 56.873 1.00 69.54 C
ATOM 7 C4' C A1236 8.409 87.335 56.653 1.00 69.53 C
ATOM 8 O4' C A1236 7.823 88.365 55.821 1.00 68.43 O
ATOM 9 C3' C A1236 8.847 88.078 57.902 1.00 69.93 C
ATOM 10 O3' C A1236 9.872 87.365 58.580 1.00 70.81 O
ATOM 11 C2' C A1236 9.342 89.400 57.333 1.00 69.77 C
ATOM 12 O2' C A1236 10.639 89.299 56.778 1.00 70.17 O
ATOM 13 C1' C A1236 8.343 89.628 56.197 1.00 69.11 C
ATOM 14 N1 C A1236 7.220 90.528 56.522 1.00 68.88 N
ATOM 15 C2 C A1236 7.449 91.916 56.548 1.00 70.03 C
ATOM 16 O2 C A1236 8.599 92.347 56.341 1.00 71.08 O
ATOM 17 N3 C A1236 6.413 92.749 56.797 1.00 69.77 N
ATOM 18 C4 C A1236 5.194 92.252 57.015 1.00 68.08 C
ATOM 19 N4 C A1236 4.200 93.115 57.222 1.00 68.42 N
ATOM 20 C5 C A1236 4.939 90.851 57.021 1.00 66.63 C
ATOM 21 C6 C A1236 5.970 90.033 56.775 1.00 67.17 C
ATOM 22 P A A1237 9.880 87.322 60.183 1.00 71.56 P
ATOM 23 OP1 A A1237 11.067 86.522 60.570 1.00 70.01 O
ATOM 24 OP2 A A1237 8.534 86.916 60.659 1.00 71.75 O
ATOM 25 O5' A A1237 10.094 88.843 60.602 1.00 73.75 O
TER
ATOM 1 O3' C B1236 9.872 87.365 58.580 1.00 70.81 O
ATOM 2 P A B1237 9.880 87.322 60.183 1.00 71.56 P
ATOM 3 OP1 A B1237 11.067 86.522 60.570 1.00 70.01 O
ATOM 4 OP2 A B1237 8.534 86.916 60.659 1.00 71.75 O
ATOM 5 O5' A B1237 10.094 88.843 60.602 1.00 73.75 O
ATOM 6 C5' A B1237 11.358 89.505 60.397 1.00 77.89 C
ATOM 7 C4' A B1237 11.259 90.945 60.832 1.00 81.00 C
ATOM 8 O4' A B1237 10.328 91.640 59.967 1.00 81.74 O
ATOM 9 C3' A B1237 10.705 91.154 62.232 1.00 84.04 C
ATOM 10 O3' A B1237 11.737 91.030 63.202 1.00 89.52 O
ATOM 11 C2' A B1237 10.134 92.566 62.156 1.00 83.13 C
ATOM 12 O2' A B1237 11.097 93.586 62.324 1.00 82.53 O
ATOM 13 C1' A B1237 9.606 92.600 60.719 1.00 82.48 C
ATOM 14 N9 A B1237 8.185 92.283 60.612 1.00 82.49 N
ATOM 15 C8 A B1237 7.592 91.045 60.628 1.00 82.33 C
ATOM 16 N7 A B1237 6.288 91.085 60.520 1.00 82.43 N
ATOM 17 C5 A B1237 6.001 92.439 60.426 1.00 82.58 C
ATOM 18 C6 A B1237 4.792 93.143 60.303 1.00 82.98 C
ATOM 19 N6 A B1237 3.595 92.555 60.256 1.00 82.93 N
ATOM 20 N1 A B1237 4.853 94.490 60.232 1.00 83.57 N
ATOM 21 C2 A B1237 6.055 95.078 60.290 1.00 83.63 C
ATOM 22 N3 A B1237 7.260 94.526 60.413 1.00 82.51 N
ATOM 23 C4 A B1237 7.161 93.188 60.476 1.00 82.52 C
ATOM 24 P U B1238 11.425 90.373 64.638 1.00 94.06 P
ATOM 25 OP1 U B1238 11.513 88.894 64.482 1.00 92.11 O
ATOM 26 OP2 U B1238 10.177 90.983 65.178 1.00 93.33 O
ATOM 27 O5' U B1238 12.670 90.844 65.524 1.00 98.69 O
TER
ATOM 2 P C A1236 4.967 85.834 57.774 1.00 69.92 P
ATOM 3 OP1 C A1236 4.231 85.914 56.487 1.00 70.05 O
ATOM 4 OP2 C A1236 5.336 84.502 58.326 1.00 68.82 O
ATOM 5 O5' C A1236 6.291 86.706 57.634 1.00 69.46 O
ATOM 6 C5' C A1236 7.411 86.224 56.873 1.00 69.54 C
ATOM 7 C4' C A1236 8.409 87.335 56.653 1.00 69.53 C
ATOM 8 O4' C A1236 7.823 88.365 55.821 1.00 68.43 O
ATOM 9 C3' C A1236 8.847 88.078 57.902 1.00 69.93 C
ATOM 10 O3' C A1236 9.872 87.365 58.580 1.00 70.81 O
ATOM 11 C2' C A1236 9.342 89.400 57.333 1.00 69.77 C
ATOM 12 O2' C A1236 10.639 89.299 56.778 1.00 70.17 O
ATOM 13 C1' C A1236 8.343 89.628 56.197 1.00 69.11 C
ATOM 14 N1 C A1236 7.220 90.528 56.522 1.00 68.88 N
ATOM 15 C2 C A1236 7.449 91.916 56.548 1.00 70.03 C
ATOM 16 O2 C A1236 8.599 92.347 56.341 1.00 71.08 O
ATOM 17 N3 C A1236 6.413 92.749 56.797 1.00 69.77 N
ATOM 18 C4 C A1236 5.194 92.252 57.015 1.00 68.08 C
ATOM 19 N4 C A1236 4.200 93.115 57.222 1.00 68.42 N
ATOM 20 C5 C A1236 4.939 90.851 57.021 1.00 66.63 C
ATOM 21 C6 C A1236 5.970 90.033 56.775 1.00 67.17 C
ATOM 22 P A A1237 9.880 87.322 60.183 1.00 71.56 P
ATOM 23 OP1 A A1237 11.067 86.522 60.570 1.00 70.01 O
ATOM 24 OP2 A A1237 8.534 86.916 60.659 1.00 71.75 O
ATOM 25 O5' A A1237 10.094 88.843 60.602 1.00 73.75 O
TER
ATOM 1 O3' C B1236 9.872 87.365 58.580 1.00 70.81 O
ATOM 2 P A B1237 9.880 87.322 60.183 1.00 71.56 P
ATOM 3 OP1 A B1237 11.067 86.522 60.570 1.00 70.01 O
ATOM 4 OP2 A B1237 8.534 86.916 60.659 1.00 71.75 O
ATOM 5 O5' A B1237 10.094 88.843 60.602 1.00 73.75 O
ATOM 6 C5' A B1237 11.358 89.505 60.397 1.00 77.89 C
ATOM 7 C4' A B1237 11.259 90.945 60.832 1.00 81.00 C
ATOM 8 O4' A B1237 10.328 91.640 59.967 1.00 81.74 O
ATOM 9 C3' A B1237 10.705 91.154 62.232 1.00 84.04 C
ATOM 10 O3' A B1237 11.737 91.030 63.202 1.00 89.52 O
ATOM 11 C2' A B1237 10.134 92.566 62.156 1.00 83.13 C
ATOM 12 O2' A B1237 11.097 93.586 62.324 1.00 82.53 O
ATOM 13 C1' A B1237 9.606 92.600 60.719 1.00 82.48 C
ATOM 14 N9 A B1237 8.185 92.283 60.612 1.00 82.49 N
ATOM 15 C8 A B1237 7.592 91.045 60.628 1.00 82.33 C
ATOM 16 N7 A B1237 6.288 91.085 60.520 1.00 82.43 N
ATOM 17 C5 A B1237 6.001 92.439 60.426 1.00 82.58 C
ATOM 18 C6 A B1237 4.792 93.143 60.303 1.00 82.98 C
ATOM 19 N6 A B1237 3.595 92.555 60.256 1.00 82.93 N
ATOM 20 N1 A B1237 4.853 94.490 60.232 1.00 83.57 N
ATOM 21 C2 A B1237 6.055 95.078 60.290 1.00 83.63 C
ATOM 22 N3 A B1237 7.260 94.526 60.413 1.00 82.51 N
ATOM 23 C4 A B1237 7.161 93.188 60.476 1.00 82.52 C
ATOM 24 P U B1238 11.425 90.373 64.638 1.00 94.06 P
ATOM 25 OP1 U B1238 11.513 88.894 64.482 1.00 92.11 O
ATOM 26 OP2 U B1238 10.177 90.983 65.178 1.00 93.33 O
ATOM 27 O5' U B1238 12.670 90.844 65.524 1.00 98.69 O
TER
Atoms:
C2: (7.449,91.916,56.548)
OP1: (4.231,85.914,56.487)
OP2: (5.336,84.502,58.326)
C4: (5.194,92.252,57.015)
O5': (6.291,86.706,57.634)
C3': (8.847,88.078,57.902)
C1': (8.343,89.628,56.197)
O4': (7.823,88.365,55.821)
C5': (7.411,86.224,56.873)
P: (4.967,85.834,57.774)
O2: (8.599,92.347,56.341)
C4': (8.409,87.335,56.653)
C2': (9.342,89.400,57.333)
O2': (10.639,89.299,56.778)
N1: (7.220,90.528,56.522)
N3: (6.413,92.749,56.797)
N4: (4.200,93.115,57.222)
C6: (5.970,90.033,56.775)
C5: (4.939,90.851,57.021)
O3': (9.872,87.365,58.580)
OP1: (4.231,85.914,56.487)
OP2: (5.336,84.502,58.326)
C4: (5.194,92.252,57.015)
O5': (6.291,86.706,57.634)
C3': (8.847,88.078,57.902)
C1': (8.343,89.628,56.197)
O4': (7.823,88.365,55.821)
C5': (7.411,86.224,56.873)
P: (4.967,85.834,57.774)
O2: (8.599,92.347,56.341)
C4': (8.409,87.335,56.653)
C2': (9.342,89.400,57.333)
O2': (10.639,89.299,56.778)
N1: (7.220,90.528,56.522)
N3: (6.413,92.749,56.797)
N4: (4.200,93.115,57.222)
C6: (5.970,90.033,56.775)
C5: (4.939,90.851,57.021)
O3': (9.872,87.365,58.580)
OP1: (11.067,86.522,60.570)
OP2: (8.534,86.916,60.659)
C3': (10.705,91.154,62.232)
C1': (9.606,92.600,60.719)
C5': (11.358,89.505,60.397)
O4': (10.328,91.640,59.967)
C8: (7.592,91.045,60.628)
O2': (11.097,93.586,62.324)
C6: (4.792,93.143,60.303)
C5: (6.001,92.439,60.426)
C4: (7.161,93.188,60.476)
P: (9.880,87.322,60.183)
C4': (11.259,90.945,60.832)
C2': (10.134,92.566,62.156)
C2: (6.055,95.078,60.290)
N1: (4.853,94.490,60.232)
N3: (7.260,94.526,60.413)
N6: (3.595,92.555,60.256)
N7: (6.288,91.085,60.520)
N9: (8.185,92.283,60.612)
O5': (10.094,88.843,60.602)
O3': (11.737,91.030,63.202)
OP2: (8.534,86.916,60.659)
C3': (10.705,91.154,62.232)
C1': (9.606,92.600,60.719)
C5': (11.358,89.505,60.397)
O4': (10.328,91.640,59.967)
C8: (7.592,91.045,60.628)
O2': (11.097,93.586,62.324)
C6: (4.792,93.143,60.303)
C5: (6.001,92.439,60.426)
C4: (7.161,93.188,60.476)
P: (9.880,87.322,60.183)
C4': (11.259,90.945,60.832)
C2': (10.134,92.566,62.156)
C2: (6.055,95.078,60.290)
N1: (4.853,94.490,60.232)
N3: (7.260,94.526,60.413)
N6: (3.595,92.555,60.256)
N7: (6.288,91.085,60.520)
N9: (8.185,92.283,60.612)
O5': (10.094,88.843,60.602)
O3': (11.737,91.030,63.202)
Image (generated by PyMOL):