ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1662:1661

Extra

PDB:
ATOM 1 O3' C A 661 71.666 -78.866 69.779 1.00 56.23 O
ATOM 2 P G A 662 72.791 -77.747 69.875 1.00 71.65 P
ATOM 3 OP1 G A 662 73.802 -78.233 70.826 1.00 72.06 O
ATOM 4 OP2 G A 662 72.133 -76.468 70.148 1.00 70.99 O
ATOM 5 O5' G A 662 73.365 -77.754 68.419 1.00 71.72 O
ATOM 6 C5' G A 662 73.651 -78.982 67.770 1.00 72.30 C
ATOM 7 C4' G A 662 73.807 -78.789 66.295 1.00 72.23 C
ATOM 8 O4' G A 662 72.535 -78.366 65.756 1.00 71.83 O
ATOM 9 C3' G A 662 74.823 -77.728 65.910 1.00 71.93 C
ATOM 10 O3' G A 662 75.518 -78.114 64.724 1.00 72.22 O
ATOM 11 C2' G A 662 73.970 -76.488 65.654 1.00 71.23 C
ATOM 12 O2' G A 662 74.486 -75.598 64.687 1.00 70.93 O
ATOM 13 C1' G A 662 72.620 -77.064 65.229 1.00 71.26 C
ATOM 14 N9 G A 662 71.498 -76.272 65.753 1.00 70.74 N
ATOM 15 C8 G A 662 71.231 -75.794 67.054 1.00 70.50 C
ATOM 16 N7 G A 662 70.187 -75.009 67.167 1.00 70.00 N
ATOM 17 C5 G A 662 69.775 -74.960 65.830 1.00 69.91 C
ATOM 18 C6 G A 662 68.704 -74.274 65.245 1.00 69.47 C
ATOM 19 O6 G A 662 67.870 -73.567 65.781 1.00 69.06 O
ATOM 20 N1 G A 662 68.635 -74.474 63.881 1.00 69.56 N
ATOM 21 C2 G A 662 69.504 -75.260 63.127 1.00 70.03 C
ATOM 22 N2 G A 662 69.244 -75.293 61.781 1.00 70.03 N
ATOM 23 N3 G A 662 70.533 -75.926 63.647 1.00 70.46 N
ATOM 24 C4 G A 662 70.564 -75.712 64.969 1.00 70.36 C
ATOM 25 P U A 663 76.970 -78.809 64.823 1.00 92.14 P
ATOM 26 OP1 U A 663 77.585 -78.722 63.479 1.00 92.23 O
ATOM 27 OP2 U A 663 76.789 -80.145 65.457 1.00 92.72 O
ATOM 28 O5' U A 663 77.724 -77.861 65.787 1.00 91.86 O
TER

ATOM 1 O3' A B 660 69.578 -75.109 71.571 1.00 58.63 O
ATOM 2 P C B 661 68.078 -75.399 71.049 1.00 54.21 P
ATOM 3 OP1 C B 661 67.730 -74.302 70.081 1.00 53.67 O
ATOM 4 OP2 C B 661 67.226 -75.607 72.248 1.00 54.22 O
ATOM 5 O5' C B 661 68.254 -76.777 70.284 1.00 54.80 O
ATOM 6 C5' C B 661 68.801 -77.902 70.953 1.00 55.40 C
ATOM 7 C4' C B 661 69.242 -78.963 69.984 1.00 55.91 C
ATOM 8 O4' C B 661 68.179 -79.235 69.044 1.00 55.85 O
ATOM 9 C3' C B 661 70.442 -78.616 69.112 1.00 55.92 C
ATOM 10 O3' C B 661 71.666 -78.866 69.779 1.00 56.23 O
ATOM 11 C2' C B 661 70.242 -79.511 67.900 1.00 56.27 C
ATOM 12 O2' C B 661 70.711 -80.811 68.191 1.00 56.94 O
ATOM 13 C1' C B 661 68.717 -79.570 67.788 1.00 56.07 C
ATOM 14 N1 C B 661 68.150 -78.640 66.762 1.00 55.56 N
ATOM 15 C2 C B 661 68.256 -78.909 65.373 1.00 55.70 C
ATOM 16 O2 C B 661 68.913 -79.925 65.023 1.00 56.25 O
ATOM 17 N3 C B 661 67.685 -78.052 64.454 1.00 55.24 N
ATOM 18 C4 C B 661 66.998 -76.981 64.888 1.00 54.67 C
ATOM 19 N4 C B 661 66.429 -76.129 64.001 1.00 54.23 N
ATOM 20 C5 C B 661 66.860 -76.722 66.298 1.00 54.53 C
ATOM 21 C6 C B 661 67.421 -77.555 67.186 1.00 54.98 C
ATOM 22 P G B 662 72.791 -77.747 69.875 1.00 71.65 P
ATOM 23 OP1 G B 662 73.802 -78.233 70.826 1.00 72.06 O
ATOM 24 OP2 G B 662 72.133 -76.468 70.148 1.00 70.99 O
ATOM 25 O5' G B 662 73.365 -77.754 68.419 1.00 71.72 O
TER

Atoms:
OP1: (73.802,-78.233,70.826)
OP2: (72.133,-76.468,70.148)
C3': (74.823,-77.728,65.910)
C1': (72.620,-77.064,65.229)
C5': (73.651,-78.982,67.770)
O6: (67.870,-73.567,65.781)
O4': (72.535,-78.366,65.756)
C8: (71.231,-75.794,67.054)
C2: (69.504,-75.260,63.127)
C6: (68.704,-74.274,65.245)
C5: (69.775,-74.960,65.830)
C4: (70.564,-75.712,64.969)
P: (72.791,-77.747,69.875)
C4': (73.807,-78.789,66.295)
C2': (73.970,-76.488,65.654)
O2': (74.486,-75.598,64.687)
N1: (68.635,-74.474,63.881)
N2: (69.244,-75.293,61.781)
N3: (70.533,-75.926,63.647)
N7: (70.187,-75.009,67.167)
N9: (71.498,-76.272,65.753)
O5': (73.365,-77.754,68.419)
O3': (75.518,-78.114,64.724)
C2: (68.256,-78.909,65.373)
OP1: (67.730,-74.302,70.081)
OP2: (67.226,-75.607,72.248)
C4: (66.998,-76.981,64.888)
O5': (68.254,-76.777,70.284)
C3': (70.442,-78.616,69.112)
C1': (68.717,-79.570,67.788)
O4': (68.179,-79.235,69.044)
C5': (68.801,-77.902,70.953)
P: (68.078,-75.399,71.049)
O2: (68.913,-79.925,65.023)
C4': (69.242,-78.963,69.984)
C2': (70.242,-79.511,67.900)
O2': (70.711,-80.811,68.191)
N1: (68.150,-78.640,66.762)
N3: (67.685,-78.052,64.454)
N4: (66.429,-76.129,64.001)
C6: (67.421,-77.555,67.186)
C5: (66.860,-76.722,66.298)
O3': (71.666,-78.866,69.779)
Image (generated by PyMOL):
PyMOL image
show in jmol