Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0350:0349
Extra
PDB:
ATOM 1 O3' C A 349 52.093 113.760 -0.985 1.00 94.50 O
ATOM 2 P G A 350 53.247 113.442 -2.062 1.00 96.10 P
ATOM 3 OP1 G A 350 52.748 112.323 -2.903 1.00 96.25 O
ATOM 4 OP2 G A 350 54.545 113.294 -1.342 1.00 94.34 O
ATOM 5 O5' G A 350 53.305 114.760 -2.966 1.00 96.30 O
ATOM 6 C5' G A 350 52.194 115.127 -3.822 1.00 97.06 C
ATOM 7 C4' G A 350 52.431 116.482 -4.469 1.00 98.23 C
ATOM 8 O4' G A 350 52.487 117.520 -3.447 1.00 98.36 O
ATOM 9 C3' G A 350 53.736 116.666 -5.231 1.00 98.47 C
ATOM 10 O3' G A 350 53.728 116.093 -6.532 1.00 99.96 O
ATOM 11 C2' G A 350 53.879 118.182 -5.254 1.00 97.47 C
ATOM 12 O2' G A 350 53.060 118.815 -6.218 1.00 94.93 O
ATOM 13 C1' G A 350 53.411 118.533 -3.839 1.00 96.93 C
ATOM 14 N9 G A 350 54.539 118.516 -2.909 1.00 95.54 N
ATOM 15 C8 G A 350 54.848 117.536 -1.992 1.00 95.18 C
ATOM 16 N7 G A 350 55.956 117.772 -1.342 1.00 95.04 N
ATOM 17 C5 G A 350 56.400 118.986 -1.850 1.00 95.00 C
ATOM 18 C6 G A 350 57.559 119.744 -1.535 1.00 94.88 C
ATOM 19 O6 G A 350 58.458 119.478 -0.723 1.00 95.22 O
ATOM 20 N1 G A 350 57.621 120.919 -2.282 1.00 93.92 N
ATOM 21 C2 G A 350 56.692 121.313 -3.215 1.00 93.35 C
ATOM 22 N2 G A 350 56.928 122.482 -3.831 1.00 92.56 N
ATOM 23 N3 G A 350 55.610 120.612 -3.522 1.00 93.80 N
ATOM 24 C4 G A 350 55.529 119.468 -2.806 1.00 94.82 C
ATOM 25 P C A 351 55.068 115.404 -7.100 1.00101.70 P
ATOM 26 OP1 C A 351 54.701 114.731 -8.373 1.00101.11 O
ATOM 27 OP2 C A 351 55.704 114.611 -6.006 1.00100.96 O
ATOM 28 O5' C A 351 56.032 116.633 -7.422 1.00100.37 O
TER
ATOM 1 O3' A B 348 54.075 113.995 4.865 1.00 86.87 O
ATOM 2 P C B 349 54.746 113.622 3.457 1.00 89.52 P
ATOM 3 OP1 C B 349 54.708 112.138 3.350 1.00 89.76 O
ATOM 4 OP2 C B 349 56.051 114.331 3.361 1.00 89.94 O
ATOM 5 O5' C B 349 53.745 114.251 2.386 1.00 88.65 O
ATOM 6 C5' C B 349 52.407 113.739 2.240 1.00 89.83 C
ATOM 7 C4' C B 349 51.616 114.590 1.274 1.00 91.50 C
ATOM 8 O4' C B 349 51.435 115.920 1.831 1.00 92.06 O
ATOM 9 C3' C B 349 52.256 114.849 -0.081 1.00 92.93 C
ATOM 10 O3' C B 349 52.093 113.760 -0.985 1.00 94.50 O
ATOM 11 C2' C B 349 51.526 116.105 -0.540 1.00 92.22 C
ATOM 12 O2' C B 349 50.231 115.833 -1.044 1.00 91.40 O
ATOM 13 C1' C B 349 51.415 116.879 0.778 1.00 91.62 C
ATOM 14 N1 C B 349 52.527 117.832 0.982 1.00 90.57 N
ATOM 15 C2 C B 349 52.364 119.164 0.561 1.00 90.05 C
ATOM 16 O2 C B 349 51.283 119.510 0.050 1.00 88.42 O
ATOM 17 N3 C B 349 53.389 120.039 0.725 1.00 89.95 N
ATOM 18 C4 C B 349 54.533 119.631 1.287 1.00 90.26 C
ATOM 19 N4 C B 349 55.517 120.527 1.429 1.00 89.60 N
ATOM 20 C5 C B 349 54.720 118.287 1.730 1.00 90.38 C
ATOM 21 C6 C B 349 53.703 117.431 1.561 1.00 90.77 C
ATOM 22 P G B 350 53.247 113.442 -2.062 1.00 96.10 P
ATOM 23 OP1 G B 350 52.748 112.323 -2.903 1.00 96.25 O
ATOM 24 OP2 G B 350 54.545 113.294 -1.342 1.00 94.34 O
ATOM 25 O5' G B 350 53.305 114.760 -2.966 1.00 96.30 O
TER
ATOM 2 P G A 350 53.247 113.442 -2.062 1.00 96.10 P
ATOM 3 OP1 G A 350 52.748 112.323 -2.903 1.00 96.25 O
ATOM 4 OP2 G A 350 54.545 113.294 -1.342 1.00 94.34 O
ATOM 5 O5' G A 350 53.305 114.760 -2.966 1.00 96.30 O
ATOM 6 C5' G A 350 52.194 115.127 -3.822 1.00 97.06 C
ATOM 7 C4' G A 350 52.431 116.482 -4.469 1.00 98.23 C
ATOM 8 O4' G A 350 52.487 117.520 -3.447 1.00 98.36 O
ATOM 9 C3' G A 350 53.736 116.666 -5.231 1.00 98.47 C
ATOM 10 O3' G A 350 53.728 116.093 -6.532 1.00 99.96 O
ATOM 11 C2' G A 350 53.879 118.182 -5.254 1.00 97.47 C
ATOM 12 O2' G A 350 53.060 118.815 -6.218 1.00 94.93 O
ATOM 13 C1' G A 350 53.411 118.533 -3.839 1.00 96.93 C
ATOM 14 N9 G A 350 54.539 118.516 -2.909 1.00 95.54 N
ATOM 15 C8 G A 350 54.848 117.536 -1.992 1.00 95.18 C
ATOM 16 N7 G A 350 55.956 117.772 -1.342 1.00 95.04 N
ATOM 17 C5 G A 350 56.400 118.986 -1.850 1.00 95.00 C
ATOM 18 C6 G A 350 57.559 119.744 -1.535 1.00 94.88 C
ATOM 19 O6 G A 350 58.458 119.478 -0.723 1.00 95.22 O
ATOM 20 N1 G A 350 57.621 120.919 -2.282 1.00 93.92 N
ATOM 21 C2 G A 350 56.692 121.313 -3.215 1.00 93.35 C
ATOM 22 N2 G A 350 56.928 122.482 -3.831 1.00 92.56 N
ATOM 23 N3 G A 350 55.610 120.612 -3.522 1.00 93.80 N
ATOM 24 C4 G A 350 55.529 119.468 -2.806 1.00 94.82 C
ATOM 25 P C A 351 55.068 115.404 -7.100 1.00101.70 P
ATOM 26 OP1 C A 351 54.701 114.731 -8.373 1.00101.11 O
ATOM 27 OP2 C A 351 55.704 114.611 -6.006 1.00100.96 O
ATOM 28 O5' C A 351 56.032 116.633 -7.422 1.00100.37 O
TER
ATOM 1 O3' A B 348 54.075 113.995 4.865 1.00 86.87 O
ATOM 2 P C B 349 54.746 113.622 3.457 1.00 89.52 P
ATOM 3 OP1 C B 349 54.708 112.138 3.350 1.00 89.76 O
ATOM 4 OP2 C B 349 56.051 114.331 3.361 1.00 89.94 O
ATOM 5 O5' C B 349 53.745 114.251 2.386 1.00 88.65 O
ATOM 6 C5' C B 349 52.407 113.739 2.240 1.00 89.83 C
ATOM 7 C4' C B 349 51.616 114.590 1.274 1.00 91.50 C
ATOM 8 O4' C B 349 51.435 115.920 1.831 1.00 92.06 O
ATOM 9 C3' C B 349 52.256 114.849 -0.081 1.00 92.93 C
ATOM 10 O3' C B 349 52.093 113.760 -0.985 1.00 94.50 O
ATOM 11 C2' C B 349 51.526 116.105 -0.540 1.00 92.22 C
ATOM 12 O2' C B 349 50.231 115.833 -1.044 1.00 91.40 O
ATOM 13 C1' C B 349 51.415 116.879 0.778 1.00 91.62 C
ATOM 14 N1 C B 349 52.527 117.832 0.982 1.00 90.57 N
ATOM 15 C2 C B 349 52.364 119.164 0.561 1.00 90.05 C
ATOM 16 O2 C B 349 51.283 119.510 0.050 1.00 88.42 O
ATOM 17 N3 C B 349 53.389 120.039 0.725 1.00 89.95 N
ATOM 18 C4 C B 349 54.533 119.631 1.287 1.00 90.26 C
ATOM 19 N4 C B 349 55.517 120.527 1.429 1.00 89.60 N
ATOM 20 C5 C B 349 54.720 118.287 1.730 1.00 90.38 C
ATOM 21 C6 C B 349 53.703 117.431 1.561 1.00 90.77 C
ATOM 22 P G B 350 53.247 113.442 -2.062 1.00 96.10 P
ATOM 23 OP1 G B 350 52.748 112.323 -2.903 1.00 96.25 O
ATOM 24 OP2 G B 350 54.545 113.294 -1.342 1.00 94.34 O
ATOM 25 O5' G B 350 53.305 114.760 -2.966 1.00 96.30 O
TER
Atoms:
OP1: (52.748,112.323,-2.903)
OP2: (54.545,113.294,-1.342)
C3': (53.736,116.666,-5.231)
C1': (53.411,118.533,-3.839)
C5': (52.194,115.127,-3.822)
O6: (58.458,119.478,-0.723)
O4': (52.487,117.520,-3.447)
C8: (54.848,117.536,-1.992)
C2: (56.692,121.313,-3.215)
C6: (57.559,119.744,-1.535)
C5: (56.400,118.986,-1.850)
C4: (55.529,119.468,-2.806)
P: (53.247,113.442,-2.062)
C4': (52.431,116.482,-4.469)
C2': (53.879,118.182,-5.254)
O2': (53.060,118.815,-6.218)
N1: (57.621,120.919,-2.282)
N2: (56.928,122.482,-3.831)
N3: (55.610,120.612,-3.522)
N7: (55.956,117.772,-1.342)
N9: (54.539,118.516,-2.909)
O5': (53.305,114.760,-2.966)
O3': (53.728,116.093,-6.532)
OP2: (54.545,113.294,-1.342)
C3': (53.736,116.666,-5.231)
C1': (53.411,118.533,-3.839)
C5': (52.194,115.127,-3.822)
O6: (58.458,119.478,-0.723)
O4': (52.487,117.520,-3.447)
C8: (54.848,117.536,-1.992)
C2: (56.692,121.313,-3.215)
C6: (57.559,119.744,-1.535)
C5: (56.400,118.986,-1.850)
C4: (55.529,119.468,-2.806)
P: (53.247,113.442,-2.062)
C4': (52.431,116.482,-4.469)
C2': (53.879,118.182,-5.254)
O2': (53.060,118.815,-6.218)
N1: (57.621,120.919,-2.282)
N2: (56.928,122.482,-3.831)
N3: (55.610,120.612,-3.522)
N7: (55.956,117.772,-1.342)
N9: (54.539,118.516,-2.909)
O5': (53.305,114.760,-2.966)
O3': (53.728,116.093,-6.532)
C2: (52.364,119.164,0.561)
OP1: (54.708,112.138,3.350)
OP2: (56.051,114.331,3.361)
C4: (54.533,119.631,1.287)
O5': (53.745,114.251,2.386)
C3': (52.256,114.849,-0.081)
C1': (51.415,116.879,0.778)
O4': (51.435,115.920,1.831)
C5': (52.407,113.739,2.240)
P: (54.746,113.622,3.457)
O2: (51.283,119.510,0.050)
C4': (51.616,114.590,1.274)
C2': (51.526,116.105,-0.540)
O2': (50.231,115.833,-1.044)
N1: (52.527,117.832,0.982)
N3: (53.389,120.039,0.725)
N4: (55.517,120.527,1.429)
C6: (53.703,117.431,1.561)
C5: (54.720,118.287,1.730)
O3': (52.093,113.760,-0.985)
OP1: (54.708,112.138,3.350)
OP2: (56.051,114.331,3.361)
C4: (54.533,119.631,1.287)
O5': (53.745,114.251,2.386)
C3': (52.256,114.849,-0.081)
C1': (51.415,116.879,0.778)
O4': (51.435,115.920,1.831)
C5': (52.407,113.739,2.240)
P: (54.746,113.622,3.457)
O2: (51.283,119.510,0.050)
C4': (51.616,114.590,1.274)
C2': (51.526,116.105,-0.540)
O2': (50.231,115.833,-1.044)
N1: (52.527,117.832,0.982)
N3: (53.389,120.039,0.725)
N4: (55.517,120.527,1.429)
C6: (53.703,117.431,1.561)
C5: (54.720,118.287,1.730)
O3': (52.093,113.760,-0.985)
Image (generated by PyMOL):