Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1248:A1247
Extra
PDB:
ATOM 1 O3' C A1247 31.402 -50.141 3.888 1.00 30.98 O
ATOM 2 P G A1248 31.203 -48.902 4.851 1.00 31.89 P
ATOM 3 OP1 G A1248 32.198 -47.872 4.480 1.00 42.20 O
ATOM 4 OP2 G A1248 31.220 -49.436 6.227 1.00 40.34 O
ATOM 5 O5' G A1248 29.736 -48.401 4.450 1.00 47.95 O
ATOM 6 C5' G A1248 29.489 -47.808 3.169 1.00 37.81 C
ATOM 7 C4' G A1248 28.015 -47.790 2.813 1.00 37.81 C
ATOM 8 O4' G A1248 27.531 -49.152 2.686 1.00 40.19 O
ATOM 9 C3' G A1248 27.066 -47.145 3.828 1.00 33.41 C
ATOM 10 O3' G A1248 26.951 -45.745 3.682 1.00 30.62 O
ATOM 11 C2' G A1248 25.757 -47.854 3.545 1.00 39.60 C
ATOM 12 O2' G A1248 25.148 -47.329 2.374 1.00 41.79 O
ATOM 13 C1' G A1248 26.238 -49.260 3.243 1.00 38.28 C
ATOM 14 N9 G A1248 26.331 -50.058 4.472 1.00 37.03 N
ATOM 15 C8 G A1248 27.453 -50.180 5.244 1.00 41.75 C
ATOM 16 N7 G A1248 27.259 -50.941 6.281 1.00 51.19 N
ATOM 17 C5 G A1248 25.933 -51.336 6.177 1.00 40.29 C
ATOM 18 C6 G A1248 25.177 -52.160 7.037 1.00 39.88 C
ATOM 19 O6 G A1248 25.565 -52.717 8.076 1.00 45.61 O
ATOM 20 N1 G A1248 23.875 -52.291 6.584 1.00 34.72 N
ATOM 21 C2 G A1248 23.384 -51.709 5.445 1.00 38.85 C
ATOM 22 N2 G A1248 22.108 -51.955 5.143 1.00 38.76 N
ATOM 23 N3 G A1248 24.082 -50.938 4.645 1.00 40.60 N
ATOM 24 C4 G A1248 25.344 -50.794 5.070 1.00 36.00 C
ATOM 25 P U A1249 28.222 -44.796 3.859 1.00 34.61 P
ATOM 26 OP1 U A1249 29.176 -45.511 4.754 1.00 29.92 O
ATOM 27 OP2 U A1249 27.718 -43.461 4.278 1.00 36.47 O
ATOM 28 O5' U A1249 28.811 -44.688 2.362 1.00 31.37 O
TER
ATOM 1 O3' C B1246 32.432 -54.653 8.534 1.00 28.70 O
ATOM 2 P C B1247 31.775 -53.214 8.284 1.00 33.66 P
ATOM 3 OP1 C B1247 32.811 -52.175 8.622 1.00 33.30 O
ATOM 4 OP2 C B1247 30.494 -53.194 9.017 1.00 53.78 O
ATOM 5 O5' C B1247 31.499 -53.233 6.713 1.00 27.59 O
ATOM 6 C5' C B1247 32.293 -52.473 5.836 1.00 30.93 C
ATOM 7 C4' C B1247 31.721 -52.456 4.466 1.00 30.99 C
ATOM 8 O4' C B1247 30.949 -53.643 4.250 1.00 33.25 O
ATOM 9 C3' C B1247 30.750 -51.345 4.183 1.00 30.24 C
ATOM 10 O3' C B1247 31.402 -50.141 3.888 1.00 30.98 O
ATOM 11 C2' C B1247 29.961 -51.895 3.015 1.00 33.49 C
ATOM 12 O2' C B1247 30.715 -51.790 1.820 1.00 37.14 O
ATOM 13 C1' C B1247 29.883 -53.360 3.379 1.00 31.30 C
ATOM 14 N1 C B1247 28.615 -53.727 4.035 1.00 35.09 N
ATOM 15 C2 C B1247 27.432 -53.809 3.286 1.00 35.07 C
ATOM 16 O2 C B1247 27.440 -53.493 2.084 1.00 33.44 O
ATOM 17 N3 C B1247 26.299 -54.223 3.876 1.00 32.33 N
ATOM 18 C4 C B1247 26.331 -54.564 5.140 1.00 33.15 C
ATOM 19 N4 C B1247 25.199 -54.958 5.673 1.00 40.52 N
ATOM 20 C5 C B1247 27.501 -54.523 5.930 1.00 36.25 C
ATOM 21 C6 C B1247 28.618 -54.108 5.335 1.00 35.17 C
ATOM 22 P G B1248 31.203 -48.902 4.851 1.00 31.89 P
ATOM 23 OP1 G B1248 32.198 -47.872 4.480 1.00 42.20 O
ATOM 24 OP2 G B1248 31.220 -49.436 6.227 1.00 40.34 O
ATOM 25 O5' G B1248 29.736 -48.401 4.450 1.00 47.95 O
TER
ATOM 2 P G A1248 31.203 -48.902 4.851 1.00 31.89 P
ATOM 3 OP1 G A1248 32.198 -47.872 4.480 1.00 42.20 O
ATOM 4 OP2 G A1248 31.220 -49.436 6.227 1.00 40.34 O
ATOM 5 O5' G A1248 29.736 -48.401 4.450 1.00 47.95 O
ATOM 6 C5' G A1248 29.489 -47.808 3.169 1.00 37.81 C
ATOM 7 C4' G A1248 28.015 -47.790 2.813 1.00 37.81 C
ATOM 8 O4' G A1248 27.531 -49.152 2.686 1.00 40.19 O
ATOM 9 C3' G A1248 27.066 -47.145 3.828 1.00 33.41 C
ATOM 10 O3' G A1248 26.951 -45.745 3.682 1.00 30.62 O
ATOM 11 C2' G A1248 25.757 -47.854 3.545 1.00 39.60 C
ATOM 12 O2' G A1248 25.148 -47.329 2.374 1.00 41.79 O
ATOM 13 C1' G A1248 26.238 -49.260 3.243 1.00 38.28 C
ATOM 14 N9 G A1248 26.331 -50.058 4.472 1.00 37.03 N
ATOM 15 C8 G A1248 27.453 -50.180 5.244 1.00 41.75 C
ATOM 16 N7 G A1248 27.259 -50.941 6.281 1.00 51.19 N
ATOM 17 C5 G A1248 25.933 -51.336 6.177 1.00 40.29 C
ATOM 18 C6 G A1248 25.177 -52.160 7.037 1.00 39.88 C
ATOM 19 O6 G A1248 25.565 -52.717 8.076 1.00 45.61 O
ATOM 20 N1 G A1248 23.875 -52.291 6.584 1.00 34.72 N
ATOM 21 C2 G A1248 23.384 -51.709 5.445 1.00 38.85 C
ATOM 22 N2 G A1248 22.108 -51.955 5.143 1.00 38.76 N
ATOM 23 N3 G A1248 24.082 -50.938 4.645 1.00 40.60 N
ATOM 24 C4 G A1248 25.344 -50.794 5.070 1.00 36.00 C
ATOM 25 P U A1249 28.222 -44.796 3.859 1.00 34.61 P
ATOM 26 OP1 U A1249 29.176 -45.511 4.754 1.00 29.92 O
ATOM 27 OP2 U A1249 27.718 -43.461 4.278 1.00 36.47 O
ATOM 28 O5' U A1249 28.811 -44.688 2.362 1.00 31.37 O
TER
ATOM 1 O3' C B1246 32.432 -54.653 8.534 1.00 28.70 O
ATOM 2 P C B1247 31.775 -53.214 8.284 1.00 33.66 P
ATOM 3 OP1 C B1247 32.811 -52.175 8.622 1.00 33.30 O
ATOM 4 OP2 C B1247 30.494 -53.194 9.017 1.00 53.78 O
ATOM 5 O5' C B1247 31.499 -53.233 6.713 1.00 27.59 O
ATOM 6 C5' C B1247 32.293 -52.473 5.836 1.00 30.93 C
ATOM 7 C4' C B1247 31.721 -52.456 4.466 1.00 30.99 C
ATOM 8 O4' C B1247 30.949 -53.643 4.250 1.00 33.25 O
ATOM 9 C3' C B1247 30.750 -51.345 4.183 1.00 30.24 C
ATOM 10 O3' C B1247 31.402 -50.141 3.888 1.00 30.98 O
ATOM 11 C2' C B1247 29.961 -51.895 3.015 1.00 33.49 C
ATOM 12 O2' C B1247 30.715 -51.790 1.820 1.00 37.14 O
ATOM 13 C1' C B1247 29.883 -53.360 3.379 1.00 31.30 C
ATOM 14 N1 C B1247 28.615 -53.727 4.035 1.00 35.09 N
ATOM 15 C2 C B1247 27.432 -53.809 3.286 1.00 35.07 C
ATOM 16 O2 C B1247 27.440 -53.493 2.084 1.00 33.44 O
ATOM 17 N3 C B1247 26.299 -54.223 3.876 1.00 32.33 N
ATOM 18 C4 C B1247 26.331 -54.564 5.140 1.00 33.15 C
ATOM 19 N4 C B1247 25.199 -54.958 5.673 1.00 40.52 N
ATOM 20 C5 C B1247 27.501 -54.523 5.930 1.00 36.25 C
ATOM 21 C6 C B1247 28.618 -54.108 5.335 1.00 35.17 C
ATOM 22 P G B1248 31.203 -48.902 4.851 1.00 31.89 P
ATOM 23 OP1 G B1248 32.198 -47.872 4.480 1.00 42.20 O
ATOM 24 OP2 G B1248 31.220 -49.436 6.227 1.00 40.34 O
ATOM 25 O5' G B1248 29.736 -48.401 4.450 1.00 47.95 O
TER
Atoms:
OP1: (32.198,-47.872,4.480)
OP2: (31.220,-49.436,6.227)
C3': (27.066,-47.145,3.828)
C1': (26.238,-49.260,3.243)
C5': (29.489,-47.808,3.169)
O6: (25.565,-52.717,8.076)
O4': (27.531,-49.152,2.686)
C8: (27.453,-50.180,5.244)
C2: (23.384,-51.709,5.445)
C6: (25.177,-52.160,7.037)
C5: (25.933,-51.336,6.177)
C4: (25.344,-50.794,5.070)
P: (31.203,-48.902,4.851)
C4': (28.015,-47.790,2.813)
C2': (25.757,-47.854,3.545)
O2': (25.148,-47.329,2.374)
N1: (23.875,-52.291,6.584)
N2: (22.108,-51.955,5.143)
N3: (24.082,-50.938,4.645)
N7: (27.259,-50.941,6.281)
N9: (26.331,-50.058,4.472)
O5': (29.736,-48.401,4.450)
O3': (26.951,-45.745,3.682)
OP2: (31.220,-49.436,6.227)
C3': (27.066,-47.145,3.828)
C1': (26.238,-49.260,3.243)
C5': (29.489,-47.808,3.169)
O6: (25.565,-52.717,8.076)
O4': (27.531,-49.152,2.686)
C8: (27.453,-50.180,5.244)
C2: (23.384,-51.709,5.445)
C6: (25.177,-52.160,7.037)
C5: (25.933,-51.336,6.177)
C4: (25.344,-50.794,5.070)
P: (31.203,-48.902,4.851)
C4': (28.015,-47.790,2.813)
C2': (25.757,-47.854,3.545)
O2': (25.148,-47.329,2.374)
N1: (23.875,-52.291,6.584)
N2: (22.108,-51.955,5.143)
N3: (24.082,-50.938,4.645)
N7: (27.259,-50.941,6.281)
N9: (26.331,-50.058,4.472)
O5': (29.736,-48.401,4.450)
O3': (26.951,-45.745,3.682)
C2: (27.432,-53.809,3.286)
OP1: (32.811,-52.175,8.622)
OP2: (30.494,-53.194,9.017)
C4: (26.331,-54.564,5.140)
O5': (31.499,-53.233,6.713)
C3': (30.750,-51.345,4.183)
C1': (29.883,-53.360,3.379)
O4': (30.949,-53.643,4.250)
C5': (32.293,-52.473,5.836)
P: (31.775,-53.214,8.284)
O2: (27.440,-53.493,2.084)
C4': (31.721,-52.456,4.466)
C2': (29.961,-51.895,3.015)
O2': (30.715,-51.790,1.820)
N1: (28.615,-53.727,4.035)
N3: (26.299,-54.223,3.876)
N4: (25.199,-54.958,5.673)
C6: (28.618,-54.108,5.335)
C5: (27.501,-54.523,5.930)
O3': (31.402,-50.141,3.888)
OP1: (32.811,-52.175,8.622)
OP2: (30.494,-53.194,9.017)
C4: (26.331,-54.564,5.140)
O5': (31.499,-53.233,6.713)
C3': (30.750,-51.345,4.183)
C1': (29.883,-53.360,3.379)
O4': (30.949,-53.643,4.250)
C5': (32.293,-52.473,5.836)
P: (31.775,-53.214,8.284)
O2: (27.440,-53.493,2.084)
C4': (31.721,-52.456,4.466)
C2': (29.961,-51.895,3.015)
O2': (30.715,-51.790,1.820)
N1: (28.615,-53.727,4.035)
N3: (26.299,-54.223,3.876)
N4: (25.199,-54.958,5.673)
C6: (28.618,-54.108,5.335)
C5: (27.501,-54.523,5.930)
O3': (31.402,-50.141,3.888)
Image (generated by PyMOL):