ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QWY:B16:B15

Extra

PDB:
ATOM 1 O3' C A 15 10.641 21.211 -7.651 1.00 51.22 O
ATOM 2 P G A 16 10.195 21.454 -6.141 1.00 51.46 P
ATOM 3 OP1 G A 16 9.140 20.468 -5.804 1.00 52.33 O
ATOM 4 OP2 G A 16 9.903 22.898 -6.028 1.00 51.75 O
ATOM 5 O5' G A 16 11.506 21.148 -5.295 1.00 50.74 O
ATOM 6 C5' G A 16 12.249 19.952 -5.488 1.00 53.55 C
ATOM 7 C4' G A 16 13.474 19.959 -4.605 1.00 56.25 C
ATOM 8 O4' G A 16 14.391 20.990 -5.056 1.00 59.75 O
ATOM 9 C3' G A 16 13.179 20.270 -3.147 1.00 56.41 C
ATOM 10 O3' G A 16 14.074 19.609 -2.290 1.00 50.70 O
ATOM 11 C2' G A 16 13.388 21.772 -3.047 1.00 59.42 C
ATOM 12 O2' G A 16 13.837 22.202 -1.779 1.00 59.88 O
ATOM 13 C1' G A 16 14.472 22.021 -4.090 1.00 61.77 C
ATOM 14 N9 G A 16 14.188 23.291 -4.738 1.00 66.26 N
ATOM 15 C8 G A 16 12.993 23.687 -5.297 1.00 68.05 C
ATOM 16 N7 G A 16 13.019 24.908 -5.754 1.00 68.66 N
ATOM 17 C5 G A 16 14.310 25.335 -5.491 1.00 69.90 C
ATOM 18 C6 G A 16 14.916 26.566 -5.752 1.00 72.06 C
ATOM 19 O6 G A 16 14.419 27.562 -6.288 1.00 74.99 O
ATOM 20 N1 G A 16 16.242 26.585 -5.323 1.00 73.30 N
ATOM 21 C2 G A 16 16.896 25.533 -4.714 1.00 73.15 C
ATOM 22 N2 G A 16 18.191 25.746 -4.372 1.00 73.91 N
ATOM 23 N3 G A 16 16.327 24.364 -4.461 1.00 69.17 N
ATOM 24 C4 G A 16 15.045 24.339 -4.873 1.00 68.16 C
ATOM 25 P U A 17 13.502 18.644 -1.157 1.00 49.79 P
ATOM 26 OP1 U A 17 12.181 18.143 -1.602 1.00 49.67 O
ATOM 27 OP2 U A 17 13.606 19.315 0.155 1.00 46.50 O
ATOM 28 O5' U A 17 14.553 17.455 -1.218 1.00 50.09 O
TER

ATOM 1 O3' C B 14 10.410 26.296 -10.690 1.00 63.08 O
ATOM 2 P C B 15 10.197 25.977 -9.135 1.00 64.12 P
ATOM 3 OP1 C B 15 8.729 25.920 -8.889 1.00 62.19 O
ATOM 4 OP2 C B 15 11.047 26.891 -8.322 1.00 63.64 O
ATOM 5 O5' C B 15 10.802 24.517 -8.988 1.00 61.93 O
ATOM 6 C5' C B 15 10.525 23.517 -9.957 1.00 58.67 C
ATOM 7 C4' C B 15 11.344 22.282 -9.675 1.00 56.94 C
ATOM 8 O4' C B 15 12.646 22.445 -10.283 1.00 58.42 O
ATOM 9 C3' C B 15 11.653 22.012 -8.212 1.00 54.62 C
ATOM 10 O3' C B 15 10.641 21.211 -7.651 1.00 51.22 O
ATOM 11 C2' C B 15 12.920 21.181 -8.296 1.00 55.14 C
ATOM 12 O2' C B 15 12.635 19.837 -8.575 1.00 58.96 O
ATOM 13 C1' C B 15 13.623 21.798 -9.496 1.00 55.98 C
ATOM 14 N1 C B 15 14.576 22.800 -9.063 1.00 56.15 N
ATOM 15 C2 C B 15 15.772 22.374 -8.527 1.00 57.23 C
ATOM 16 O2 C B 15 15.970 21.157 -8.420 1.00 56.87 O
ATOM 17 N3 C B 15 16.682 23.290 -8.130 1.00 57.99 N
ATOM 18 C4 C B 15 16.406 24.591 -8.247 1.00 58.03 C
ATOM 19 N4 C B 15 17.326 25.466 -7.844 1.00 58.87 N
ATOM 20 C5 C B 15 15.172 25.051 -8.784 1.00 58.58 C
ATOM 21 C6 C B 15 14.295 24.130 -9.178 1.00 56.50 C
ATOM 22 P G B 16 10.195 21.454 -6.141 1.00 51.46 P
ATOM 23 OP1 G B 16 9.140 20.468 -5.804 1.00 52.33 O
ATOM 24 OP2 G B 16 9.903 22.898 -6.028 1.00 51.75 O
ATOM 25 O5' G B 16 11.506 21.148 -5.295 1.00 50.74 O
TER

Atoms:
OP1: (9.140,20.468,-5.804)
OP2: (9.903,22.898,-6.028)
C3': (13.179,20.270,-3.147)
C1': (14.472,22.021,-4.090)
C5': (12.249,19.952,-5.488)
O6: (14.419,27.562,-6.288)
O4': (14.391,20.990,-5.056)
C8: (12.993,23.687,-5.297)
C2: (16.896,25.533,-4.714)
C6: (14.916,26.566,-5.752)
C5: (14.310,25.335,-5.491)
C4: (15.045,24.339,-4.873)
P: (10.195,21.454,-6.141)
C4': (13.474,19.959,-4.605)
C2': (13.388,21.772,-3.047)
O2': (13.837,22.202,-1.779)
N1: (16.242,26.585,-5.323)
N2: (18.191,25.746,-4.372)
N3: (16.327,24.364,-4.461)
N7: (13.019,24.908,-5.754)
N9: (14.188,23.291,-4.738)
O5': (11.506,21.148,-5.295)
O3': (14.074,19.609,-2.290)
C2: (15.772,22.374,-8.527)
OP1: (8.729,25.920,-8.889)
OP2: (11.047,26.891,-8.322)
C4: (16.406,24.591,-8.247)
O5': (10.802,24.517,-8.988)
C3': (11.653,22.012,-8.212)
C1': (13.623,21.798,-9.496)
O4': (12.646,22.445,-10.283)
C5': (10.525,23.517,-9.957)
P: (10.197,25.977,-9.135)
O2: (15.970,21.157,-8.420)
C4': (11.344,22.282,-9.675)
C2': (12.920,21.181,-8.296)
O2': (12.635,19.837,-8.575)
N1: (14.576,22.800,-9.063)
N3: (16.682,23.290,-8.130)
N4: (17.326,25.466,-7.844)
C6: (14.295,24.130,-9.178)
C5: (15.172,25.051,-8.784)
O3': (10.641,21.211,-7.651)
Image (generated by PyMOL):
PyMOL image
show in jmol