Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MHK:S6:S5
Extra
PDB:
ATOM 1 O3' C A 5 -3.411 -3.341 12.323 1.00 45.67 O
ATOM 2 P G A 6 -3.539 -3.389 13.928 1.00 48.42 P
ATOM 3 OP1 G A 6 -4.786 -4.149 14.204 1.00 47.81 O
ATOM 4 OP2 G A 6 -3.390 -2.011 14.472 1.00 47.13 O
ATOM 5 O5' G A 6 -2.276 -4.254 14.388 1.00 48.74 O
ATOM 6 C5' G A 6 -2.015 -5.544 13.835 1.00 49.04 C
ATOM 7 C4' G A 6 -0.598 -5.972 14.149 1.00 52.39 C
ATOM 8 O4' G A 6 0.348 -5.177 13.377 1.00 51.91 O
ATOM 9 C3' G A 6 -0.159 -5.789 15.598 1.00 54.30 C
ATOM 10 O3' G A 6 -0.558 -6.889 16.408 1.00 57.99 O
ATOM 11 C2' G A 6 1.357 -5.716 15.463 1.00 53.01 C
ATOM 12 O2' G A 6 1.951 -6.988 15.320 1.00 52.38 O
ATOM 13 C1' G A 6 1.507 -4.918 14.163 1.00 51.91 C
ATOM 14 N9 G A 6 1.573 -3.484 14.423 1.00 49.61 N
ATOM 15 C8 G A 6 0.511 -2.612 14.477 1.00 49.83 C
ATOM 16 N7 G A 6 0.864 -1.390 14.769 1.00 48.88 N
ATOM 17 C5 G A 6 2.243 -1.455 14.911 1.00 48.44 C
ATOM 18 C6 G A 6 3.175 -0.444 15.247 1.00 47.98 C
ATOM 19 O6 G A 6 2.958 0.739 15.509 1.00 50.07 O
ATOM 20 N1 G A 6 4.474 -0.933 15.277 1.00 46.99 N
ATOM 21 C2 G A 6 4.834 -2.232 15.031 1.00 47.38 C
ATOM 22 N2 G A 6 6.149 -2.499 15.100 1.00 45.85 N
ATOM 23 N3 G A 6 3.969 -3.197 14.735 1.00 47.44 N
ATOM 24 C4 G A 6 2.700 -2.738 14.689 1.00 48.18 C
ATOM 25 P A A 7 -0.817 -6.677 17.990 1.00 61.97 P
ATOM 26 OP1 A A 7 -2.239 -7.033 18.255 1.00 60.30 O
ATOM 27 OP2 A A 7 -0.303 -5.343 18.420 1.00 59.67 O
ATOM 28 O5' A A 7 0.090 -7.809 18.655 1.00 63.95 O
TER
ATOM 1 O3' G B 4 -3.018 2.237 10.100 1.00 38.77 O
ATOM 2 P C B 5 -2.967 1.769 11.623 1.00 38.42 P
ATOM 3 OP1 C B 5 -4.321 1.921 12.194 1.00 38.72 O
ATOM 4 OP2 C B 5 -1.817 2.436 12.273 1.00 37.47 O
ATOM 5 O5' C B 5 -2.652 0.216 11.495 1.00 40.95 O
ATOM 6 C5' C B 5 -3.444 -0.613 10.655 1.00 40.24 C
ATOM 7 C4' C B 5 -2.775 -1.949 10.460 1.00 43.40 C
ATOM 8 O4' C B 5 -1.552 -1.794 9.688 1.00 43.13 O
ATOM 9 C3' C B 5 -2.317 -2.666 11.720 1.00 43.13 C
ATOM 10 O3' C B 5 -3.411 -3.341 12.323 1.00 45.67 O
ATOM 11 C2' C B 5 -1.313 -3.650 11.140 1.00 43.07 C
ATOM 12 O2' C B 5 -1.961 -4.711 10.468 1.00 41.39 O
ATOM 13 C1' C B 5 -0.613 -2.777 10.096 1.00 42.15 C
ATOM 14 N1 C B 5 0.571 -2.087 10.625 1.00 41.93 N
ATOM 15 C2 C B 5 1.764 -2.796 10.737 1.00 40.82 C
ATOM 16 O2 C B 5 1.778 -3.989 10.409 1.00 43.09 O
ATOM 17 N3 C B 5 2.869 -2.166 11.195 1.00 39.54 N
ATOM 18 C4 C B 5 2.806 -0.877 11.538 1.00 39.87 C
ATOM 19 N4 C B 5 3.919 -0.291 11.979 1.00 37.84 N
ATOM 20 C5 C B 5 1.596 -0.130 11.444 1.00 40.15 C
ATOM 21 C6 C B 5 0.512 -0.770 10.990 1.00 41.48 C
ATOM 22 P G B 6 -3.539 -3.389 13.928 1.00 48.42 P
ATOM 23 OP1 G B 6 -4.786 -4.149 14.204 1.00 47.81 O
ATOM 24 OP2 G B 6 -3.390 -2.011 14.472 1.00 47.13 O
ATOM 25 O5' G B 6 -2.276 -4.254 14.388 1.00 48.74 O
TER
ATOM 2 P G A 6 -3.539 -3.389 13.928 1.00 48.42 P
ATOM 3 OP1 G A 6 -4.786 -4.149 14.204 1.00 47.81 O
ATOM 4 OP2 G A 6 -3.390 -2.011 14.472 1.00 47.13 O
ATOM 5 O5' G A 6 -2.276 -4.254 14.388 1.00 48.74 O
ATOM 6 C5' G A 6 -2.015 -5.544 13.835 1.00 49.04 C
ATOM 7 C4' G A 6 -0.598 -5.972 14.149 1.00 52.39 C
ATOM 8 O4' G A 6 0.348 -5.177 13.377 1.00 51.91 O
ATOM 9 C3' G A 6 -0.159 -5.789 15.598 1.00 54.30 C
ATOM 10 O3' G A 6 -0.558 -6.889 16.408 1.00 57.99 O
ATOM 11 C2' G A 6 1.357 -5.716 15.463 1.00 53.01 C
ATOM 12 O2' G A 6 1.951 -6.988 15.320 1.00 52.38 O
ATOM 13 C1' G A 6 1.507 -4.918 14.163 1.00 51.91 C
ATOM 14 N9 G A 6 1.573 -3.484 14.423 1.00 49.61 N
ATOM 15 C8 G A 6 0.511 -2.612 14.477 1.00 49.83 C
ATOM 16 N7 G A 6 0.864 -1.390 14.769 1.00 48.88 N
ATOM 17 C5 G A 6 2.243 -1.455 14.911 1.00 48.44 C
ATOM 18 C6 G A 6 3.175 -0.444 15.247 1.00 47.98 C
ATOM 19 O6 G A 6 2.958 0.739 15.509 1.00 50.07 O
ATOM 20 N1 G A 6 4.474 -0.933 15.277 1.00 46.99 N
ATOM 21 C2 G A 6 4.834 -2.232 15.031 1.00 47.38 C
ATOM 22 N2 G A 6 6.149 -2.499 15.100 1.00 45.85 N
ATOM 23 N3 G A 6 3.969 -3.197 14.735 1.00 47.44 N
ATOM 24 C4 G A 6 2.700 -2.738 14.689 1.00 48.18 C
ATOM 25 P A A 7 -0.817 -6.677 17.990 1.00 61.97 P
ATOM 26 OP1 A A 7 -2.239 -7.033 18.255 1.00 60.30 O
ATOM 27 OP2 A A 7 -0.303 -5.343 18.420 1.00 59.67 O
ATOM 28 O5' A A 7 0.090 -7.809 18.655 1.00 63.95 O
TER
ATOM 1 O3' G B 4 -3.018 2.237 10.100 1.00 38.77 O
ATOM 2 P C B 5 -2.967 1.769 11.623 1.00 38.42 P
ATOM 3 OP1 C B 5 -4.321 1.921 12.194 1.00 38.72 O
ATOM 4 OP2 C B 5 -1.817 2.436 12.273 1.00 37.47 O
ATOM 5 O5' C B 5 -2.652 0.216 11.495 1.00 40.95 O
ATOM 6 C5' C B 5 -3.444 -0.613 10.655 1.00 40.24 C
ATOM 7 C4' C B 5 -2.775 -1.949 10.460 1.00 43.40 C
ATOM 8 O4' C B 5 -1.552 -1.794 9.688 1.00 43.13 O
ATOM 9 C3' C B 5 -2.317 -2.666 11.720 1.00 43.13 C
ATOM 10 O3' C B 5 -3.411 -3.341 12.323 1.00 45.67 O
ATOM 11 C2' C B 5 -1.313 -3.650 11.140 1.00 43.07 C
ATOM 12 O2' C B 5 -1.961 -4.711 10.468 1.00 41.39 O
ATOM 13 C1' C B 5 -0.613 -2.777 10.096 1.00 42.15 C
ATOM 14 N1 C B 5 0.571 -2.087 10.625 1.00 41.93 N
ATOM 15 C2 C B 5 1.764 -2.796 10.737 1.00 40.82 C
ATOM 16 O2 C B 5 1.778 -3.989 10.409 1.00 43.09 O
ATOM 17 N3 C B 5 2.869 -2.166 11.195 1.00 39.54 N
ATOM 18 C4 C B 5 2.806 -0.877 11.538 1.00 39.87 C
ATOM 19 N4 C B 5 3.919 -0.291 11.979 1.00 37.84 N
ATOM 20 C5 C B 5 1.596 -0.130 11.444 1.00 40.15 C
ATOM 21 C6 C B 5 0.512 -0.770 10.990 1.00 41.48 C
ATOM 22 P G B 6 -3.539 -3.389 13.928 1.00 48.42 P
ATOM 23 OP1 G B 6 -4.786 -4.149 14.204 1.00 47.81 O
ATOM 24 OP2 G B 6 -3.390 -2.011 14.472 1.00 47.13 O
ATOM 25 O5' G B 6 -2.276 -4.254 14.388 1.00 48.74 O
TER
Atoms:
OP1: (-4.786,-4.149,14.204)
OP2: (-3.390,-2.011,14.472)
C3': (-0.159,-5.789,15.598)
C1': (1.507,-4.918,14.163)
C5': (-2.015,-5.544,13.835)
O6: (2.958,0.739,15.509)
O4': (0.348,-5.177,13.377)
C8: (0.511,-2.612,14.477)
C2: (4.834,-2.232,15.031)
C6: (3.175,-0.444,15.247)
C5: (2.243,-1.455,14.911)
C4: (2.700,-2.738,14.689)
P: (-3.539,-3.389,13.928)
C4': (-0.598,-5.972,14.149)
C2': (1.357,-5.716,15.463)
O2': (1.951,-6.988,15.320)
N1: (4.474,-0.933,15.277)
N2: (6.149,-2.499,15.100)
N3: (3.969,-3.197,14.735)
N7: (0.864,-1.390,14.769)
N9: (1.573,-3.484,14.423)
O5': (-2.276,-4.254,14.388)
O3': (-0.558,-6.889,16.408)
OP2: (-3.390,-2.011,14.472)
C3': (-0.159,-5.789,15.598)
C1': (1.507,-4.918,14.163)
C5': (-2.015,-5.544,13.835)
O6: (2.958,0.739,15.509)
O4': (0.348,-5.177,13.377)
C8: (0.511,-2.612,14.477)
C2: (4.834,-2.232,15.031)
C6: (3.175,-0.444,15.247)
C5: (2.243,-1.455,14.911)
C4: (2.700,-2.738,14.689)
P: (-3.539,-3.389,13.928)
C4': (-0.598,-5.972,14.149)
C2': (1.357,-5.716,15.463)
O2': (1.951,-6.988,15.320)
N1: (4.474,-0.933,15.277)
N2: (6.149,-2.499,15.100)
N3: (3.969,-3.197,14.735)
N7: (0.864,-1.390,14.769)
N9: (1.573,-3.484,14.423)
O5': (-2.276,-4.254,14.388)
O3': (-0.558,-6.889,16.408)
C2: (1.764,-2.796,10.737)
OP1: (-4.321,1.921,12.194)
OP2: (-1.817,2.436,12.273)
C4: (2.806,-0.877,11.538)
O5': (-2.652,0.216,11.495)
C3': (-2.317,-2.666,11.720)
C1': (-0.613,-2.777,10.096)
O4': (-1.552,-1.794,9.688)
C5': (-3.444,-0.613,10.655)
P: (-2.967,1.769,11.623)
O2: (1.778,-3.989,10.409)
C4': (-2.775,-1.949,10.460)
C2': (-1.313,-3.650,11.140)
O2': (-1.961,-4.711,10.468)
N1: (0.571,-2.087,10.625)
N3: (2.869,-2.166,11.195)
N4: (3.919,-0.291,11.979)
C6: (0.512,-0.770,10.990)
C5: (1.596,-0.130,11.444)
O3': (-3.411,-3.341,12.323)
OP1: (-4.321,1.921,12.194)
OP2: (-1.817,2.436,12.273)
C4: (2.806,-0.877,11.538)
O5': (-2.652,0.216,11.495)
C3': (-2.317,-2.666,11.720)
C1': (-0.613,-2.777,10.096)
O4': (-1.552,-1.794,9.688)
C5': (-3.444,-0.613,10.655)
P: (-2.967,1.769,11.623)
O2: (1.778,-3.989,10.409)
C4': (-2.775,-1.949,10.460)
C2': (-1.313,-3.650,11.140)
O2': (-1.961,-4.711,10.468)
N1: (0.571,-2.087,10.625)
N3: (2.869,-2.166,11.195)
N4: (3.919,-0.291,11.979)
C6: (0.512,-0.770,10.990)
C5: (1.596,-0.130,11.444)
O3': (-3.411,-3.341,12.323)
Image (generated by PyMOL):