Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0350:0349
Extra
PDB:
ATOM 1 O3' C A 349 51.231 113.298 -1.372 1.00 99.08 O
ATOM 2 P G A 350 52.303 112.947 -2.523 1.00100.27 P
ATOM 3 OP1 G A 350 51.672 111.935 -3.415 1.00100.15 O
ATOM 4 OP2 G A 350 53.613 112.644 -1.881 1.00 98.97 O
ATOM 5 O5' G A 350 52.445 114.308 -3.345 1.00 99.72 O
ATOM 6 C5' G A 350 51.350 114.818 -4.140 1.00 99.04 C
ATOM 7 C4' G A 350 51.702 116.172 -4.720 1.00 98.91 C
ATOM 8 O4' G A 350 51.879 117.134 -3.645 1.00 98.29 O
ATOM 9 C3' G A 350 53.012 116.241 -5.489 1.00 98.92 C
ATOM 10 O3' G A 350 52.890 115.765 -6.822 1.00 99.32 O
ATOM 11 C2' G A 350 53.352 117.723 -5.417 1.00 98.37 C
ATOM 12 O2' G A 350 52.625 118.508 -6.342 1.00 97.88 O
ATOM 13 C1' G A 350 52.908 118.054 -3.989 1.00 97.41 C
ATOM 14 N9 G A 350 53.997 117.909 -3.025 1.00 96.16 N
ATOM 15 C8 G A 350 54.204 116.864 -2.152 1.00 95.72 C
ATOM 16 N7 G A 350 55.277 117.008 -1.423 1.00 95.20 N
ATOM 17 C5 G A 350 55.813 118.222 -1.834 1.00 95.19 C
ATOM 18 C6 G A 350 56.981 118.907 -1.401 1.00 94.78 C
ATOM 19 O6 G A 350 57.801 118.564 -0.538 1.00 94.37 O
ATOM 20 N1 G A 350 57.152 120.108 -2.086 1.00 94.10 N
ATOM 21 C2 G A 350 56.310 120.591 -3.059 1.00 93.69 C
ATOM 22 N2 G A 350 56.647 121.770 -3.602 1.00 92.85 N
ATOM 23 N3 G A 350 55.218 119.965 -3.470 1.00 93.85 N
ATOM 24 C4 G A 350 55.032 118.794 -2.820 1.00 95.32 C
ATOM 25 P A A 351 54.120 114.988 -7.499 1.00 99.44 P
ATOM 26 OP1 A A 351 53.602 114.317 -8.717 1.00100.20 O
ATOM 27 OP2 A A 351 54.807 114.183 -6.455 1.00 99.87 O
ATOM 28 O5' A A 351 55.114 116.150 -7.943 1.00 99.61 O
TER
ATOM 1 O3' A B 348 53.330 113.417 4.432 1.00 93.58 O
ATOM 2 P C B 349 54.153 113.149 3.080 1.00 95.90 P
ATOM 3 OP1 C B 349 54.321 111.678 2.948 1.00 96.08 O
ATOM 4 OP2 C B 349 55.351 114.027 3.090 1.00 96.21 O
ATOM 5 O5' C B 349 53.172 113.649 1.927 1.00 95.43 O
ATOM 6 C5' C B 349 51.852 113.089 1.789 1.00 96.18 C
ATOM 7 C4' C B 349 50.983 113.999 0.955 1.00 96.93 C
ATOM 8 O4' C B 349 50.876 115.294 1.608 1.00 96.96 O
ATOM 9 C3' C B 349 51.514 114.331 -0.430 1.00 97.54 C
ATOM 10 O3' C B 349 51.231 113.298 -1.372 1.00 99.08 O
ATOM 11 C2' C B 349 50.791 115.635 -0.743 1.00 96.80 C
ATOM 12 O2' C B 349 49.446 115.436 -1.133 1.00 96.68 O
ATOM 13 C1' C B 349 50.810 116.320 0.627 1.00 96.05 C
ATOM 14 N1 C B 349 51.959 117.233 0.811 1.00 94.54 N
ATOM 15 C2 C B 349 51.836 118.570 0.390 1.00 93.82 C
ATOM 16 O2 C B 349 50.763 118.952 -0.107 1.00 92.75 O
ATOM 17 N3 C B 349 52.890 119.409 0.539 1.00 93.50 N
ATOM 18 C4 C B 349 54.025 118.965 1.089 1.00 93.53 C
ATOM 19 N4 C B 349 55.037 119.829 1.219 1.00 92.41 N
ATOM 20 C5 C B 349 54.173 117.616 1.531 1.00 93.38 C
ATOM 21 C6 C B 349 53.128 116.794 1.374 1.00 93.97 C
ATOM 22 P G B 350 52.303 112.947 -2.523 1.00100.27 P
ATOM 23 OP1 G B 350 51.672 111.935 -3.415 1.00100.15 O
ATOM 24 OP2 G B 350 53.613 112.644 -1.881 1.00 98.97 O
ATOM 25 O5' G B 350 52.445 114.308 -3.345 1.00 99.72 O
TER
ATOM 2 P G A 350 52.303 112.947 -2.523 1.00100.27 P
ATOM 3 OP1 G A 350 51.672 111.935 -3.415 1.00100.15 O
ATOM 4 OP2 G A 350 53.613 112.644 -1.881 1.00 98.97 O
ATOM 5 O5' G A 350 52.445 114.308 -3.345 1.00 99.72 O
ATOM 6 C5' G A 350 51.350 114.818 -4.140 1.00 99.04 C
ATOM 7 C4' G A 350 51.702 116.172 -4.720 1.00 98.91 C
ATOM 8 O4' G A 350 51.879 117.134 -3.645 1.00 98.29 O
ATOM 9 C3' G A 350 53.012 116.241 -5.489 1.00 98.92 C
ATOM 10 O3' G A 350 52.890 115.765 -6.822 1.00 99.32 O
ATOM 11 C2' G A 350 53.352 117.723 -5.417 1.00 98.37 C
ATOM 12 O2' G A 350 52.625 118.508 -6.342 1.00 97.88 O
ATOM 13 C1' G A 350 52.908 118.054 -3.989 1.00 97.41 C
ATOM 14 N9 G A 350 53.997 117.909 -3.025 1.00 96.16 N
ATOM 15 C8 G A 350 54.204 116.864 -2.152 1.00 95.72 C
ATOM 16 N7 G A 350 55.277 117.008 -1.423 1.00 95.20 N
ATOM 17 C5 G A 350 55.813 118.222 -1.834 1.00 95.19 C
ATOM 18 C6 G A 350 56.981 118.907 -1.401 1.00 94.78 C
ATOM 19 O6 G A 350 57.801 118.564 -0.538 1.00 94.37 O
ATOM 20 N1 G A 350 57.152 120.108 -2.086 1.00 94.10 N
ATOM 21 C2 G A 350 56.310 120.591 -3.059 1.00 93.69 C
ATOM 22 N2 G A 350 56.647 121.770 -3.602 1.00 92.85 N
ATOM 23 N3 G A 350 55.218 119.965 -3.470 1.00 93.85 N
ATOM 24 C4 G A 350 55.032 118.794 -2.820 1.00 95.32 C
ATOM 25 P A A 351 54.120 114.988 -7.499 1.00 99.44 P
ATOM 26 OP1 A A 351 53.602 114.317 -8.717 1.00100.20 O
ATOM 27 OP2 A A 351 54.807 114.183 -6.455 1.00 99.87 O
ATOM 28 O5' A A 351 55.114 116.150 -7.943 1.00 99.61 O
TER
ATOM 1 O3' A B 348 53.330 113.417 4.432 1.00 93.58 O
ATOM 2 P C B 349 54.153 113.149 3.080 1.00 95.90 P
ATOM 3 OP1 C B 349 54.321 111.678 2.948 1.00 96.08 O
ATOM 4 OP2 C B 349 55.351 114.027 3.090 1.00 96.21 O
ATOM 5 O5' C B 349 53.172 113.649 1.927 1.00 95.43 O
ATOM 6 C5' C B 349 51.852 113.089 1.789 1.00 96.18 C
ATOM 7 C4' C B 349 50.983 113.999 0.955 1.00 96.93 C
ATOM 8 O4' C B 349 50.876 115.294 1.608 1.00 96.96 O
ATOM 9 C3' C B 349 51.514 114.331 -0.430 1.00 97.54 C
ATOM 10 O3' C B 349 51.231 113.298 -1.372 1.00 99.08 O
ATOM 11 C2' C B 349 50.791 115.635 -0.743 1.00 96.80 C
ATOM 12 O2' C B 349 49.446 115.436 -1.133 1.00 96.68 O
ATOM 13 C1' C B 349 50.810 116.320 0.627 1.00 96.05 C
ATOM 14 N1 C B 349 51.959 117.233 0.811 1.00 94.54 N
ATOM 15 C2 C B 349 51.836 118.570 0.390 1.00 93.82 C
ATOM 16 O2 C B 349 50.763 118.952 -0.107 1.00 92.75 O
ATOM 17 N3 C B 349 52.890 119.409 0.539 1.00 93.50 N
ATOM 18 C4 C B 349 54.025 118.965 1.089 1.00 93.53 C
ATOM 19 N4 C B 349 55.037 119.829 1.219 1.00 92.41 N
ATOM 20 C5 C B 349 54.173 117.616 1.531 1.00 93.38 C
ATOM 21 C6 C B 349 53.128 116.794 1.374 1.00 93.97 C
ATOM 22 P G B 350 52.303 112.947 -2.523 1.00100.27 P
ATOM 23 OP1 G B 350 51.672 111.935 -3.415 1.00100.15 O
ATOM 24 OP2 G B 350 53.613 112.644 -1.881 1.00 98.97 O
ATOM 25 O5' G B 350 52.445 114.308 -3.345 1.00 99.72 O
TER
Atoms:
OP1: (51.672,111.935,-3.415)
OP2: (53.613,112.644,-1.881)
C3': (53.012,116.241,-5.489)
C1': (52.908,118.054,-3.989)
C5': (51.350,114.818,-4.140)
O6: (57.801,118.564,-0.538)
O4': (51.879,117.134,-3.645)
C8: (54.204,116.864,-2.152)
C2: (56.310,120.591,-3.059)
C6: (56.981,118.907,-1.401)
C5: (55.813,118.222,-1.834)
C4: (55.032,118.794,-2.820)
P: (52.303,112.947,-2.523)
C4': (51.702,116.172,-4.720)
C2': (53.352,117.723,-5.417)
O2': (52.625,118.508,-6.342)
N1: (57.152,120.108,-2.086)
N2: (56.647,121.770,-3.602)
N3: (55.218,119.965,-3.470)
N7: (55.277,117.008,-1.423)
N9: (53.997,117.909,-3.025)
O5': (52.445,114.308,-3.345)
O3': (52.890,115.765,-6.822)
OP2: (53.613,112.644,-1.881)
C3': (53.012,116.241,-5.489)
C1': (52.908,118.054,-3.989)
C5': (51.350,114.818,-4.140)
O6: (57.801,118.564,-0.538)
O4': (51.879,117.134,-3.645)
C8: (54.204,116.864,-2.152)
C2: (56.310,120.591,-3.059)
C6: (56.981,118.907,-1.401)
C5: (55.813,118.222,-1.834)
C4: (55.032,118.794,-2.820)
P: (52.303,112.947,-2.523)
C4': (51.702,116.172,-4.720)
C2': (53.352,117.723,-5.417)
O2': (52.625,118.508,-6.342)
N1: (57.152,120.108,-2.086)
N2: (56.647,121.770,-3.602)
N3: (55.218,119.965,-3.470)
N7: (55.277,117.008,-1.423)
N9: (53.997,117.909,-3.025)
O5': (52.445,114.308,-3.345)
O3': (52.890,115.765,-6.822)
C2: (51.836,118.570,0.390)
OP1: (54.321,111.678,2.948)
OP2: (55.351,114.027,3.090)
C4: (54.025,118.965,1.089)
O5': (53.172,113.649,1.927)
C3': (51.514,114.331,-0.430)
C1': (50.810,116.320,0.627)
O4': (50.876,115.294,1.608)
C5': (51.852,113.089,1.789)
P: (54.153,113.149,3.080)
O2: (50.763,118.952,-0.107)
C4': (50.983,113.999,0.955)
C2': (50.791,115.635,-0.743)
O2': (49.446,115.436,-1.133)
N1: (51.959,117.233,0.811)
N3: (52.890,119.409,0.539)
N4: (55.037,119.829,1.219)
C6: (53.128,116.794,1.374)
C5: (54.173,117.616,1.531)
O3': (51.231,113.298,-1.372)
OP1: (54.321,111.678,2.948)
OP2: (55.351,114.027,3.090)
C4: (54.025,118.965,1.089)
O5': (53.172,113.649,1.927)
C3': (51.514,114.331,-0.430)
C1': (50.810,116.320,0.627)
O4': (50.876,115.294,1.608)
C5': (51.852,113.089,1.789)
P: (54.153,113.149,3.080)
O2: (50.763,118.952,-0.107)
C4': (50.983,113.999,0.955)
C2': (50.791,115.635,-0.743)
O2': (49.446,115.436,-1.133)
N1: (51.959,117.233,0.811)
N3: (52.890,119.409,0.539)
N4: (55.037,119.829,1.219)
C6: (53.128,116.794,1.374)
C5: (54.173,117.616,1.531)
O3': (51.231,113.298,-1.372)
Image (generated by PyMOL):