Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0245:0244
Extra
PDB:
ATOM 1 O3' C A 244 89.752 143.425 -9.478 1.00 82.42 O
ATOM 2 P G A 245 90.510 142.016 -9.322 1.00 81.87 P
ATOM 3 OP1 G A 245 91.676 142.032 -10.240 1.00 82.54 O
ATOM 4 OP2 G A 245 89.498 140.931 -9.436 1.00 81.39 O
ATOM 5 O5' G A 245 91.083 142.032 -7.836 1.00 80.67 O
ATOM 6 C5' G A 245 91.983 143.069 -7.402 1.00 76.88 C
ATOM 7 C4' G A 245 91.861 143.274 -5.910 1.00 74.57 C
ATOM 8 O4' G A 245 90.464 143.510 -5.591 1.00 73.84 O
ATOM 9 C3' G A 245 92.235 142.090 -5.032 1.00 72.87 C
ATOM 10 O3' G A 245 93.635 142.015 -4.790 1.00 72.75 O
ATOM 11 C2' G A 245 91.467 142.395 -3.759 1.00 72.75 C
ATOM 12 O2' G A 245 92.087 143.398 -2.985 1.00 72.14 O
ATOM 13 C1' G A 245 90.158 142.934 -4.334 1.00 73.40 C
ATOM 14 N9 G A 245 89.184 141.864 -4.535 1.00 73.88 N
ATOM 15 C8 G A 245 88.752 141.326 -5.727 1.00 74.09 C
ATOM 16 N7 G A 245 87.895 140.353 -5.567 1.00 74.52 N
ATOM 17 C5 G A 245 87.746 140.248 -4.188 1.00 73.68 C
ATOM 18 C6 G A 245 86.949 139.368 -3.409 1.00 72.05 C
ATOM 19 O6 G A 245 86.190 138.475 -3.793 1.00 72.32 O
ATOM 20 N1 G A 245 87.103 139.609 -2.048 1.00 70.92 N
ATOM 21 C2 G A 245 87.920 140.567 -1.500 1.00 71.57 C
ATOM 22 N2 G A 245 87.944 140.644 -0.161 1.00 70.83 N
ATOM 23 N3 G A 245 88.664 141.392 -2.212 1.00 72.99 N
ATOM 24 C4 G A 245 88.530 141.178 -3.539 1.00 73.83 C
ATOM 25 P G A 246 94.297 140.609 -4.362 1.00 73.72 P
ATOM 26 OP1 G A 246 95.775 140.785 -4.315 1.00 73.91 O
ATOM 27 OP2 G A 246 93.713 139.534 -5.211 1.00 73.73 O
ATOM 28 O5' G A 246 93.804 140.390 -2.862 1.00 71.96 O
TER
ATOM 1 O3' A B 243 83.626 142.010 -9.244 1.00 87.18 O
ATOM 2 P C B 244 84.986 141.177 -9.032 1.00 88.50 P
ATOM 3 OP1 C B 244 85.283 140.462 -10.299 1.00 87.86 O
ATOM 4 OP2 C B 244 84.863 140.406 -7.765 1.00 89.67 O
ATOM 5 O5' C B 244 86.108 142.287 -8.807 1.00 87.01 O
ATOM 6 C5' C B 244 86.561 143.116 -9.889 1.00 85.36 C
ATOM 7 C4' C B 244 87.456 144.214 -9.368 1.00 84.47 C
ATOM 8 O4' C B 244 86.719 145.018 -8.409 1.00 85.08 O
ATOM 9 C3' C B 244 88.684 143.756 -8.600 1.00 84.28 C
ATOM 10 O3' C B 244 89.752 143.425 -9.478 1.00 82.42 O
ATOM 11 C2' C B 244 89.003 144.982 -7.754 1.00 85.43 C
ATOM 12 O2' C B 244 89.666 145.996 -8.485 1.00 85.87 O
ATOM 13 C1' C B 244 87.598 145.470 -7.390 1.00 86.20 C
ATOM 14 N1 C B 244 87.112 144.974 -6.084 1.00 88.34 N
ATOM 15 C2 C B 244 87.570 145.597 -4.901 1.00 89.59 C
ATOM 16 O2 C B 244 88.376 146.544 -4.980 1.00 90.27 O
ATOM 17 N3 C B 244 87.122 145.148 -3.705 1.00 89.61 N
ATOM 18 C4 C B 244 86.258 144.131 -3.653 1.00 89.26 C
ATOM 19 N4 C B 244 85.837 143.734 -2.451 1.00 89.30 N
ATOM 20 C5 C B 244 85.782 143.481 -4.832 1.00 89.06 C
ATOM 21 C6 C B 244 86.230 143.929 -6.012 1.00 88.77 C
ATOM 22 P G B 245 90.510 142.016 -9.322 1.00 81.87 P
ATOM 23 OP1 G B 245 91.676 142.032 -10.240 1.00 82.54 O
ATOM 24 OP2 G B 245 89.498 140.931 -9.436 1.00 81.39 O
ATOM 25 O5' G B 245 91.083 142.032 -7.836 1.00 80.67 O
TER
ATOM 2 P G A 245 90.510 142.016 -9.322 1.00 81.87 P
ATOM 3 OP1 G A 245 91.676 142.032 -10.240 1.00 82.54 O
ATOM 4 OP2 G A 245 89.498 140.931 -9.436 1.00 81.39 O
ATOM 5 O5' G A 245 91.083 142.032 -7.836 1.00 80.67 O
ATOM 6 C5' G A 245 91.983 143.069 -7.402 1.00 76.88 C
ATOM 7 C4' G A 245 91.861 143.274 -5.910 1.00 74.57 C
ATOM 8 O4' G A 245 90.464 143.510 -5.591 1.00 73.84 O
ATOM 9 C3' G A 245 92.235 142.090 -5.032 1.00 72.87 C
ATOM 10 O3' G A 245 93.635 142.015 -4.790 1.00 72.75 O
ATOM 11 C2' G A 245 91.467 142.395 -3.759 1.00 72.75 C
ATOM 12 O2' G A 245 92.087 143.398 -2.985 1.00 72.14 O
ATOM 13 C1' G A 245 90.158 142.934 -4.334 1.00 73.40 C
ATOM 14 N9 G A 245 89.184 141.864 -4.535 1.00 73.88 N
ATOM 15 C8 G A 245 88.752 141.326 -5.727 1.00 74.09 C
ATOM 16 N7 G A 245 87.895 140.353 -5.567 1.00 74.52 N
ATOM 17 C5 G A 245 87.746 140.248 -4.188 1.00 73.68 C
ATOM 18 C6 G A 245 86.949 139.368 -3.409 1.00 72.05 C
ATOM 19 O6 G A 245 86.190 138.475 -3.793 1.00 72.32 O
ATOM 20 N1 G A 245 87.103 139.609 -2.048 1.00 70.92 N
ATOM 21 C2 G A 245 87.920 140.567 -1.500 1.00 71.57 C
ATOM 22 N2 G A 245 87.944 140.644 -0.161 1.00 70.83 N
ATOM 23 N3 G A 245 88.664 141.392 -2.212 1.00 72.99 N
ATOM 24 C4 G A 245 88.530 141.178 -3.539 1.00 73.83 C
ATOM 25 P G A 246 94.297 140.609 -4.362 1.00 73.72 P
ATOM 26 OP1 G A 246 95.775 140.785 -4.315 1.00 73.91 O
ATOM 27 OP2 G A 246 93.713 139.534 -5.211 1.00 73.73 O
ATOM 28 O5' G A 246 93.804 140.390 -2.862 1.00 71.96 O
TER
ATOM 1 O3' A B 243 83.626 142.010 -9.244 1.00 87.18 O
ATOM 2 P C B 244 84.986 141.177 -9.032 1.00 88.50 P
ATOM 3 OP1 C B 244 85.283 140.462 -10.299 1.00 87.86 O
ATOM 4 OP2 C B 244 84.863 140.406 -7.765 1.00 89.67 O
ATOM 5 O5' C B 244 86.108 142.287 -8.807 1.00 87.01 O
ATOM 6 C5' C B 244 86.561 143.116 -9.889 1.00 85.36 C
ATOM 7 C4' C B 244 87.456 144.214 -9.368 1.00 84.47 C
ATOM 8 O4' C B 244 86.719 145.018 -8.409 1.00 85.08 O
ATOM 9 C3' C B 244 88.684 143.756 -8.600 1.00 84.28 C
ATOM 10 O3' C B 244 89.752 143.425 -9.478 1.00 82.42 O
ATOM 11 C2' C B 244 89.003 144.982 -7.754 1.00 85.43 C
ATOM 12 O2' C B 244 89.666 145.996 -8.485 1.00 85.87 O
ATOM 13 C1' C B 244 87.598 145.470 -7.390 1.00 86.20 C
ATOM 14 N1 C B 244 87.112 144.974 -6.084 1.00 88.34 N
ATOM 15 C2 C B 244 87.570 145.597 -4.901 1.00 89.59 C
ATOM 16 O2 C B 244 88.376 146.544 -4.980 1.00 90.27 O
ATOM 17 N3 C B 244 87.122 145.148 -3.705 1.00 89.61 N
ATOM 18 C4 C B 244 86.258 144.131 -3.653 1.00 89.26 C
ATOM 19 N4 C B 244 85.837 143.734 -2.451 1.00 89.30 N
ATOM 20 C5 C B 244 85.782 143.481 -4.832 1.00 89.06 C
ATOM 21 C6 C B 244 86.230 143.929 -6.012 1.00 88.77 C
ATOM 22 P G B 245 90.510 142.016 -9.322 1.00 81.87 P
ATOM 23 OP1 G B 245 91.676 142.032 -10.240 1.00 82.54 O
ATOM 24 OP2 G B 245 89.498 140.931 -9.436 1.00 81.39 O
ATOM 25 O5' G B 245 91.083 142.032 -7.836 1.00 80.67 O
TER
Atoms:
OP1: (91.676,142.032,-10.240)
OP2: (89.498,140.931,-9.436)
C3': (92.235,142.090,-5.032)
C1': (90.158,142.934,-4.334)
C5': (91.983,143.069,-7.402)
O6: (86.190,138.475,-3.793)
O4': (90.464,143.510,-5.591)
C8: (88.752,141.326,-5.727)
C2: (87.920,140.567,-1.500)
C6: (86.949,139.368,-3.409)
C5: (87.746,140.248,-4.188)
C4: (88.530,141.178,-3.539)
P: (90.510,142.016,-9.322)
C4': (91.861,143.274,-5.910)
C2': (91.467,142.395,-3.759)
O2': (92.087,143.398,-2.985)
N1: (87.103,139.609,-2.048)
N2: (87.944,140.644,-0.161)
N3: (88.664,141.392,-2.212)
N7: (87.895,140.353,-5.567)
N9: (89.184,141.864,-4.535)
O5': (91.083,142.032,-7.836)
O3': (93.635,142.015,-4.790)
OP2: (89.498,140.931,-9.436)
C3': (92.235,142.090,-5.032)
C1': (90.158,142.934,-4.334)
C5': (91.983,143.069,-7.402)
O6: (86.190,138.475,-3.793)
O4': (90.464,143.510,-5.591)
C8: (88.752,141.326,-5.727)
C2: (87.920,140.567,-1.500)
C6: (86.949,139.368,-3.409)
C5: (87.746,140.248,-4.188)
C4: (88.530,141.178,-3.539)
P: (90.510,142.016,-9.322)
C4': (91.861,143.274,-5.910)
C2': (91.467,142.395,-3.759)
O2': (92.087,143.398,-2.985)
N1: (87.103,139.609,-2.048)
N2: (87.944,140.644,-0.161)
N3: (88.664,141.392,-2.212)
N7: (87.895,140.353,-5.567)
N9: (89.184,141.864,-4.535)
O5': (91.083,142.032,-7.836)
O3': (93.635,142.015,-4.790)
C2: (87.570,145.597,-4.901)
OP1: (85.283,140.462,-10.299)
OP2: (84.863,140.406,-7.765)
C4: (86.258,144.131,-3.653)
O5': (86.108,142.287,-8.807)
C3': (88.684,143.756,-8.600)
C1': (87.598,145.470,-7.390)
O4': (86.719,145.018,-8.409)
C5': (86.561,143.116,-9.889)
P: (84.986,141.177,-9.032)
O2: (88.376,146.544,-4.980)
C4': (87.456,144.214,-9.368)
C2': (89.003,144.982,-7.754)
O2': (89.666,145.996,-8.485)
N1: (87.112,144.974,-6.084)
N3: (87.122,145.148,-3.705)
N4: (85.837,143.734,-2.451)
C6: (86.230,143.929,-6.012)
C5: (85.782,143.481,-4.832)
O3': (89.752,143.425,-9.478)
OP1: (85.283,140.462,-10.299)
OP2: (84.863,140.406,-7.765)
C4: (86.258,144.131,-3.653)
O5': (86.108,142.287,-8.807)
C3': (88.684,143.756,-8.600)
C1': (87.598,145.470,-7.390)
O4': (86.719,145.018,-8.409)
C5': (86.561,143.116,-9.889)
P: (84.986,141.177,-9.032)
O2: (88.376,146.544,-4.980)
C4': (87.456,144.214,-9.368)
C2': (89.003,144.982,-7.754)
O2': (89.666,145.996,-8.485)
N1: (87.112,144.974,-6.084)
N3: (87.122,145.148,-3.705)
N4: (85.837,143.734,-2.451)
C6: (86.230,143.929,-6.012)
C5: (85.782,143.481,-4.832)
O3': (89.752,143.425,-9.478)
Image (generated by PyMOL):