Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JBT:D8:D10
Extra
PDB:
ATOM 1 O3' C A 7 -1.408 31.247 -0.189 1.00 42.25 O
ATOM 2 P A A 8 -2.812 30.487 0.013 1.00 41.37 P
ATOM 3 OP1 A A 8 -3.203 30.638 1.437 1.00 40.59 O
ATOM 4 OP2 A A 8 -2.715 29.122 -0.581 1.00 42.71 O
ATOM 5 O5' A A 8 -3.821 31.332 -0.872 1.00 43.01 O
ATOM 6 C5' A A 8 -4.813 30.676 -1.641 1.00 41.38 C
ATOM 7 C4' A A 8 -6.010 31.572 -1.849 1.00 40.11 C
ATOM 8 O4' A A 8 -6.405 32.188 -0.583 1.00 37.47 O
ATOM 9 C3' A A 8 -5.709 32.745 -2.774 1.00 37.80 C
ATOM 10 O3' A A 8 -6.924 33.122 -3.405 1.00 42.81 O
ATOM 11 C2' A A 8 -5.208 33.814 -1.803 1.00 34.45 C
ATOM 12 O2' A A 8 -5.324 35.137 -2.271 1.00 35.23 O
ATOM 13 C1' A A 8 -6.143 33.574 -0.627 1.00 34.54 C
ATOM 14 N9 A A 8 -5.761 34.064 0.695 1.00 36.95 N
ATOM 15 C8 A A 8 -4.887 33.534 1.611 1.00 34.51 C
ATOM 16 N7 A A 8 -4.770 34.252 2.707 1.00 35.88 N
ATOM 17 C5 A A 8 -5.629 35.327 2.499 1.00 37.31 C
ATOM 18 C6 A A 8 -5.970 36.465 3.294 1.00 37.92 C
ATOM 19 N6 A A 8 -5.461 36.720 4.505 1.00 32.71 N
ATOM 20 N1 A A 8 -6.865 37.340 2.783 1.00 35.89 N
ATOM 21 C2 A A 8 -7.379 37.092 1.568 1.00 36.67 C
ATOM 22 N3 A A 8 -7.143 36.072 0.734 1.00 36.15 N
ATOM 23 C4 A A 8 -6.250 35.218 1.264 1.00 36.09 C
ATOM 24 P G A 9 -6.959 33.313 -4.985 1.00 40.12 P
ATOM 25 OP1 G A 9 -6.536 32.041 -5.613 1.00 43.99 O
ATOM 26 OP2 G A 9 -6.169 34.550 -5.234 1.00 43.20 O
ATOM 27 O5' G A 9 -8.461 33.726 -5.352 1.00 40.93 O
TER
ATOM 1 O3' G B 9 -10.681 31.426 -1.779 1.00 36.55 O
ATOM 2 P U B 10 -11.685 30.310 -1.205 1.00 38.34 P
ATOM 3 OP1 U B 10 -12.338 29.642 -2.369 1.00 38.21 O
ATOM 4 OP2 U B 10 -12.518 30.914 -0.143 1.00 33.88 O
ATOM 5 O5' U B 10 -10.714 29.256 -0.505 1.00 41.13 O
ATOM 6 C5' U B 10 -9.623 28.668 -1.233 1.00 37.79 C
ATOM 7 C4' U B 10 -8.418 28.479 -0.335 1.00 34.96 C
ATOM 8 O4' U B 10 -7.634 29.700 -0.277 1.00 35.11 O
ATOM 9 C3' U B 10 -8.699 28.127 1.116 1.00 34.08 C
ATOM 10 O3' U B 10 -8.852 26.720 1.214 1.00 38.98 O
ATOM 11 C2' U B 10 -7.428 28.604 1.805 1.00 33.80 C
ATOM 12 O2' U B 10 -6.333 27.732 1.616 1.00 33.92 O
ATOM 13 C1' U B 10 -7.140 29.893 1.039 1.00 35.08 C
ATOM 14 N1 U B 10 -7.712 31.134 1.603 1.00 35.75 N
ATOM 15 C2 U B 10 -7.228 31.567 2.830 1.00 35.02 C
ATOM 16 O2 U B 10 -6.370 30.966 3.448 1.00 40.85 O
ATOM 17 N3 U B 10 -7.790 32.729 3.302 1.00 34.86 N
ATOM 18 C4 U B 10 -8.766 33.493 2.688 1.00 35.16 C
ATOM 19 O4 U B 10 -9.184 34.513 3.249 1.00 36.46 O
ATOM 20 C5 U B 10 -9.215 32.986 1.425 1.00 30.71 C
ATOM 21 C6 U B 10 -8.692 31.856 0.940 1.00 29.72 C
ATOM 22 P A B 11 -9.958 26.101 2.198 1.00 39.74 P
ATOM 23 OP1 A B 11 -9.950 24.636 1.980 1.00 38.24 O
ATOM 24 OP2 A B 11 -11.229 26.865 2.046 1.00 38.23 O
ATOM 25 O5' A B 11 -9.368 26.388 3.644 1.00 36.52 O
TER
ATOM 2 P A A 8 -2.812 30.487 0.013 1.00 41.37 P
ATOM 3 OP1 A A 8 -3.203 30.638 1.437 1.00 40.59 O
ATOM 4 OP2 A A 8 -2.715 29.122 -0.581 1.00 42.71 O
ATOM 5 O5' A A 8 -3.821 31.332 -0.872 1.00 43.01 O
ATOM 6 C5' A A 8 -4.813 30.676 -1.641 1.00 41.38 C
ATOM 7 C4' A A 8 -6.010 31.572 -1.849 1.00 40.11 C
ATOM 8 O4' A A 8 -6.405 32.188 -0.583 1.00 37.47 O
ATOM 9 C3' A A 8 -5.709 32.745 -2.774 1.00 37.80 C
ATOM 10 O3' A A 8 -6.924 33.122 -3.405 1.00 42.81 O
ATOM 11 C2' A A 8 -5.208 33.814 -1.803 1.00 34.45 C
ATOM 12 O2' A A 8 -5.324 35.137 -2.271 1.00 35.23 O
ATOM 13 C1' A A 8 -6.143 33.574 -0.627 1.00 34.54 C
ATOM 14 N9 A A 8 -5.761 34.064 0.695 1.00 36.95 N
ATOM 15 C8 A A 8 -4.887 33.534 1.611 1.00 34.51 C
ATOM 16 N7 A A 8 -4.770 34.252 2.707 1.00 35.88 N
ATOM 17 C5 A A 8 -5.629 35.327 2.499 1.00 37.31 C
ATOM 18 C6 A A 8 -5.970 36.465 3.294 1.00 37.92 C
ATOM 19 N6 A A 8 -5.461 36.720 4.505 1.00 32.71 N
ATOM 20 N1 A A 8 -6.865 37.340 2.783 1.00 35.89 N
ATOM 21 C2 A A 8 -7.379 37.092 1.568 1.00 36.67 C
ATOM 22 N3 A A 8 -7.143 36.072 0.734 1.00 36.15 N
ATOM 23 C4 A A 8 -6.250 35.218 1.264 1.00 36.09 C
ATOM 24 P G A 9 -6.959 33.313 -4.985 1.00 40.12 P
ATOM 25 OP1 G A 9 -6.536 32.041 -5.613 1.00 43.99 O
ATOM 26 OP2 G A 9 -6.169 34.550 -5.234 1.00 43.20 O
ATOM 27 O5' G A 9 -8.461 33.726 -5.352 1.00 40.93 O
TER
ATOM 1 O3' G B 9 -10.681 31.426 -1.779 1.00 36.55 O
ATOM 2 P U B 10 -11.685 30.310 -1.205 1.00 38.34 P
ATOM 3 OP1 U B 10 -12.338 29.642 -2.369 1.00 38.21 O
ATOM 4 OP2 U B 10 -12.518 30.914 -0.143 1.00 33.88 O
ATOM 5 O5' U B 10 -10.714 29.256 -0.505 1.00 41.13 O
ATOM 6 C5' U B 10 -9.623 28.668 -1.233 1.00 37.79 C
ATOM 7 C4' U B 10 -8.418 28.479 -0.335 1.00 34.96 C
ATOM 8 O4' U B 10 -7.634 29.700 -0.277 1.00 35.11 O
ATOM 9 C3' U B 10 -8.699 28.127 1.116 1.00 34.08 C
ATOM 10 O3' U B 10 -8.852 26.720 1.214 1.00 38.98 O
ATOM 11 C2' U B 10 -7.428 28.604 1.805 1.00 33.80 C
ATOM 12 O2' U B 10 -6.333 27.732 1.616 1.00 33.92 O
ATOM 13 C1' U B 10 -7.140 29.893 1.039 1.00 35.08 C
ATOM 14 N1 U B 10 -7.712 31.134 1.603 1.00 35.75 N
ATOM 15 C2 U B 10 -7.228 31.567 2.830 1.00 35.02 C
ATOM 16 O2 U B 10 -6.370 30.966 3.448 1.00 40.85 O
ATOM 17 N3 U B 10 -7.790 32.729 3.302 1.00 34.86 N
ATOM 18 C4 U B 10 -8.766 33.493 2.688 1.00 35.16 C
ATOM 19 O4 U B 10 -9.184 34.513 3.249 1.00 36.46 O
ATOM 20 C5 U B 10 -9.215 32.986 1.425 1.00 30.71 C
ATOM 21 C6 U B 10 -8.692 31.856 0.940 1.00 29.72 C
ATOM 22 P A B 11 -9.958 26.101 2.198 1.00 39.74 P
ATOM 23 OP1 A B 11 -9.950 24.636 1.980 1.00 38.24 O
ATOM 24 OP2 A B 11 -11.229 26.865 2.046 1.00 38.23 O
ATOM 25 O5' A B 11 -9.368 26.388 3.644 1.00 36.52 O
TER
Atoms:
OP1: (-3.203,30.638,1.437)
OP2: (-2.715,29.122,-0.581)
C3': (-5.709,32.745,-2.774)
C1': (-6.143,33.574,-0.627)
C5': (-4.813,30.676,-1.641)
O4': (-6.405,32.188,-0.583)
C8: (-4.887,33.534,1.611)
O2': (-5.324,35.137,-2.271)
C6: (-5.970,36.465,3.294)
C5: (-5.629,35.327,2.499)
C4: (-6.250,35.218,1.264)
P: (-2.812,30.487,0.013)
C4': (-6.010,31.572,-1.849)
C2': (-5.208,33.814,-1.803)
C2: (-7.379,37.092,1.568)
N1: (-6.865,37.340,2.783)
N3: (-7.143,36.072,0.734)
N6: (-5.461,36.720,4.505)
N7: (-4.770,34.252,2.707)
N9: (-5.761,34.064,0.695)
O5': (-3.821,31.332,-0.872)
O3': (-6.924,33.122,-3.405)
OP2: (-2.715,29.122,-0.581)
C3': (-5.709,32.745,-2.774)
C1': (-6.143,33.574,-0.627)
C5': (-4.813,30.676,-1.641)
O4': (-6.405,32.188,-0.583)
C8: (-4.887,33.534,1.611)
O2': (-5.324,35.137,-2.271)
C6: (-5.970,36.465,3.294)
C5: (-5.629,35.327,2.499)
C4: (-6.250,35.218,1.264)
P: (-2.812,30.487,0.013)
C4': (-6.010,31.572,-1.849)
C2': (-5.208,33.814,-1.803)
C2: (-7.379,37.092,1.568)
N1: (-6.865,37.340,2.783)
N3: (-7.143,36.072,0.734)
N6: (-5.461,36.720,4.505)
N7: (-4.770,34.252,2.707)
N9: (-5.761,34.064,0.695)
O5': (-3.821,31.332,-0.872)
O3': (-6.924,33.122,-3.405)
C4: (-8.766,33.493,2.688)
N3: (-7.790,32.729,3.302)
OP1: (-12.338,29.642,-2.369)
OP2: (-12.518,30.914,-0.143)
C2: (-7.228,31.567,2.830)
C1': (-7.140,29.893,1.039)
C3': (-8.699,28.127,1.116)
O5': (-10.714,29.256,-0.505)
O4': (-7.634,29.700,-0.277)
C5': (-9.623,28.668,-1.233)
P: (-11.685,30.310,-1.205)
C4': (-8.418,28.479,-0.335)
C2': (-7.428,28.604,1.805)
O2': (-6.333,27.732,1.616)
N1: (-7.712,31.134,1.603)
O4: (-9.184,34.513,3.249)
O2: (-6.370,30.966,3.448)
C6: (-8.692,31.856,0.940)
C5: (-9.215,32.986,1.425)
O3': (-8.852,26.720,1.214)
N3: (-7.790,32.729,3.302)
OP1: (-12.338,29.642,-2.369)
OP2: (-12.518,30.914,-0.143)
C2: (-7.228,31.567,2.830)
C1': (-7.140,29.893,1.039)
C3': (-8.699,28.127,1.116)
O5': (-10.714,29.256,-0.505)
O4': (-7.634,29.700,-0.277)
C5': (-9.623,28.668,-1.233)
P: (-11.685,30.310,-1.205)
C4': (-8.418,28.479,-0.335)
C2': (-7.428,28.604,1.805)
O2': (-6.333,27.732,1.616)
N1: (-7.712,31.134,1.603)
O4: (-9.184,34.513,3.249)
O2: (-6.370,30.966,3.448)
C6: (-8.692,31.856,0.940)
C5: (-9.215,32.986,1.425)
O3': (-8.852,26.720,1.214)
Image (generated by PyMOL):