ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:02042:02380

Extra

PDB:
ATOM 1 O3' A A2041 48.923 125.548 101.019 1.00 31.89 O
ATOM 2 P A A2042 49.608 125.181 99.617 1.00 33.61 P
ATOM 3 OP1 A A2042 49.619 126.397 98.757 1.00 33.20 O
ATOM 4 OP2 A A2042 48.956 123.937 99.130 1.00 33.57 O
ATOM 5 O5' A A2042 51.100 124.809 100.010 1.00 30.95 O
ATOM 6 C5' A A2042 51.378 123.575 100.672 1.00 33.01 C
ATOM 7 C4' A A2042 52.481 123.760 101.675 1.00 32.76 C
ATOM 8 O4' A A2042 52.630 122.537 102.423 1.00 32.55 O
ATOM 9 C3' A A2042 53.842 124.060 101.068 1.00 34.77 C
ATOM 10 O3' A A2042 53.994 125.482 101.053 1.00 36.16 O
ATOM 11 C2' A A2042 54.812 123.428 102.066 1.00 34.64 C
ATOM 12 O2' A A2042 55.090 124.310 103.131 1.00 32.05 O
ATOM 13 C1' A A2042 53.997 122.243 102.599 1.00 32.48 C
ATOM 14 N9 A A2042 54.228 120.929 102.008 1.00 32.83 N
ATOM 15 C8 A A2042 54.534 119.782 102.694 1.00 33.30 C
ATOM 16 N7 A A2042 54.640 118.721 101.932 1.00 33.78 N
ATOM 17 C5 A A2042 54.397 119.204 100.653 1.00 33.03 C
ATOM 18 C6 A A2042 54.359 118.573 99.401 1.00 32.93 C
ATOM 19 N6 A A2042 54.583 117.268 99.227 1.00 33.97 N
ATOM 20 N1 A A2042 54.081 119.335 98.319 1.00 34.50 N
ATOM 21 C2 A A2042 53.859 120.643 98.497 1.00 34.34 C
ATOM 22 N3 A A2042 53.866 121.352 99.626 1.00 36.61 N
ATOM 23 C4 A A2042 54.146 120.563 100.682 1.00 33.85 C
ATOM 24 P G A2043 54.790 126.206 99.860 1.00 36.82 P
ATOM 25 OP1 G A2043 54.606 125.387 98.630 1.00 38.30 O
ATOM 26 OP2 G A2043 56.155 126.502 100.344 1.00 38.73 O
ATOM 27 O5' G A2043 54.010 127.589 99.682 1.00 32.95 O
TER

ATOM 1 O3' A B2379 59.385 121.369 95.572 1.00 59.46 O
ATOM 2 P U B2380 58.061 120.725 96.228 1.00 60.11 P
ATOM 3 OP1 U B2380 58.312 119.268 96.415 1.00 58.17 O
ATOM 4 OP2 U B2380 56.880 121.178 95.451 1.00 60.15 O
ATOM 5 O5' U B2380 57.978 121.382 97.676 1.00 59.51 O
ATOM 6 C5' U B2380 57.417 122.692 97.868 1.00 59.74 C
ATOM 7 C4' U B2380 57.873 123.260 99.191 1.00 60.55 C
ATOM 8 O4' U B2380 57.342 122.424 100.261 1.00 59.46 O
ATOM 9 C3' U B2380 59.387 123.298 99.387 1.00 61.38 C
ATOM 10 O3' U B2380 59.782 124.447 100.126 1.00 65.22 O
ATOM 11 C2' U B2380 59.662 122.022 100.174 1.00 60.23 C
ATOM 12 O2' U B2380 60.831 122.101 100.964 1.00 59.69 O
ATOM 13 C1' U B2380 58.404 121.903 101.038 1.00 57.91 C
ATOM 14 N1 U B2380 58.079 120.509 101.387 1.00 54.18 N
ATOM 15 C2 U B2380 57.917 120.182 102.730 1.00 53.10 C
ATOM 16 O2 U B2380 57.981 120.997 103.635 1.00 51.50 O
ATOM 17 N3 U B2380 57.668 118.857 102.974 1.00 54.17 N
ATOM 18 C4 U B2380 57.553 117.845 102.043 1.00 54.46 C
ATOM 19 O4 U B2380 57.347 116.690 102.424 1.00 54.28 O
ATOM 20 C5 U B2380 57.705 118.267 100.683 1.00 53.99 C
ATOM 21 C6 U B2380 57.954 119.548 100.410 1.00 53.21 C
ATOM 22 P G B2381 60.970 125.380 99.562 1.00 68.05 P
ATOM 23 OP1 G B2381 61.091 126.589 100.438 1.00 67.35 O
ATOM 24 OP2 G B2381 60.724 125.551 98.106 1.00 68.02 O
ATOM 25 O5' G B2381 62.286 124.493 99.732 1.00 64.87 O
TER

Atoms:
OP1: (49.619,126.397,98.757)
OP2: (48.956,123.937,99.130)
C3': (53.842,124.060,101.068)
C1': (53.997,122.243,102.599)
C5': (51.378,123.575,100.672)
O4': (52.630,122.537,102.423)
C8: (54.534,119.782,102.694)
O2': (55.090,124.310,103.131)
C6: (54.359,118.573,99.401)
C5: (54.397,119.204,100.653)
C4: (54.146,120.563,100.682)
P: (49.608,125.181,99.617)
C4': (52.481,123.760,101.675)
C2': (54.812,123.428,102.066)
C2: (53.859,120.643,98.497)
N1: (54.081,119.335,98.319)
N3: (53.866,121.352,99.626)
N6: (54.583,117.268,99.227)
N7: (54.640,118.721,101.932)
N9: (54.228,120.929,102.008)
O5': (51.100,124.809,100.010)
O3': (53.994,125.482,101.053)
C4: (57.553,117.845,102.043)
N3: (57.668,118.857,102.974)
OP1: (58.312,119.268,96.415)
OP2: (56.880,121.178,95.451)
C2: (57.917,120.182,102.730)
C1': (58.404,121.903,101.038)
C3': (59.387,123.298,99.387)
O5': (57.978,121.382,97.676)
O4': (57.342,122.424,100.261)
C5': (57.417,122.692,97.868)
P: (58.061,120.725,96.228)
C4': (57.873,123.260,99.191)
C2': (59.662,122.022,100.174)
O2': (60.831,122.101,100.964)
N1: (58.079,120.509,101.387)
O4: (57.347,116.690,102.424)
O2: (57.981,120.997,103.635)
C6: (57.954,119.548,100.410)
C5: (57.705,118.267,100.683)
O3': (59.782,124.447,100.126)
Image (generated by PyMOL):
PyMOL image
show in jmol