ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A583:A582

Extra

PDB:
ATOM 1 O3' G A 582 110.875 90.230 -7.373 1.00 41.92 O
ATOM 2 P U A 583 111.861 89.985 -6.135 1.00 44.76 P
ATOM 3 OP1 U A 583 111.378 88.783 -5.386 1.00 45.20 O
ATOM 4 OP2 U A 583 112.057 91.279 -5.433 1.00 44.16 O
ATOM 5 O5' U A 583 113.220 89.575 -6.825 1.00 46.53 O
ATOM 6 C5' U A 583 113.320 88.365 -7.597 1.00 46.79 C
ATOM 7 C4' U A 583 114.723 88.196 -8.119 1.00 47.19 C
ATOM 8 O4' U A 583 114.984 89.175 -9.156 1.00 47.83 O
ATOM 9 C3' U A 583 115.836 88.409 -7.107 1.00 47.37 C
ATOM 10 O3' U A 583 116.082 87.257 -6.347 1.00 48.58 O
ATOM 11 C2' U A 583 117.018 88.756 -7.997 1.00 47.37 C
ATOM 12 O2' U A 583 117.583 87.601 -8.575 1.00 46.32 O
ATOM 13 C1' U A 583 116.345 89.570 -9.099 1.00 48.11 C
ATOM 14 N1 U A 583 116.417 91.014 -8.823 1.00 49.13 N
ATOM 15 C2 U A 583 117.558 91.677 -9.214 1.00 49.93 C
ATOM 16 O2 U A 583 118.472 91.129 -9.794 1.00 52.56 O
ATOM 17 N3 U A 583 117.592 93.012 -8.903 1.00 50.07 N
ATOM 18 C4 U A 583 116.619 93.739 -8.262 1.00 48.41 C
ATOM 19 O4 U A 583 116.796 94.941 -8.063 1.00 47.24 O
ATOM 20 C5 U A 583 115.461 92.988 -7.900 1.00 49.35 C
ATOM 21 C6 U A 583 115.399 91.684 -8.186 1.00 49.49 C
ATOM 22 P G A 584 116.726 87.396 -4.887 1.00 50.23 P
ATOM 23 OP1 G A 584 117.001 86.007 -4.437 1.00 51.12 O
ATOM 24 OP2 G A 584 115.874 88.291 -4.074 1.00 50.31 O
ATOM 25 O5' G A 584 118.120 88.099 -5.144 1.00 52.49 O
TER

ATOM 1 O3' U B 581 108.478 95.661 -8.203 1.00 42.64 O
ATOM 2 P G B 582 109.404 95.096 -7.018 1.00 42.61 P
ATOM 3 OP1 G B 582 108.518 94.689 -5.885 1.00 43.21 O
ATOM 4 OP2 G B 582 110.480 96.085 -6.762 1.00 42.27 O
ATOM 5 O5' G B 582 110.007 93.791 -7.663 1.00 42.06 O
ATOM 6 C5' G B 582 109.139 92.802 -8.227 1.00 42.22 C
ATOM 7 C4' G B 582 109.935 91.766 -8.984 1.00 42.38 C
ATOM 8 O4' G B 582 110.423 92.322 -10.229 1.00 42.58 O
ATOM 9 C3' G B 582 111.173 91.239 -8.287 1.00 41.48 C
ATOM 10 O3' G B 582 110.875 90.230 -7.373 1.00 41.92 O
ATOM 11 C2' G B 582 112.017 90.737 -9.449 1.00 41.54 C
ATOM 12 O2' G B 582 111.654 89.454 -9.901 1.00 42.42 O
ATOM 13 C1' G B 582 111.685 91.754 -10.538 1.00 41.34 C
ATOM 14 N9 G B 582 112.685 92.813 -10.556 1.00 39.53 N
ATOM 15 C8 G B 582 112.611 94.048 -9.963 1.00 39.07 C
ATOM 16 N7 G B 582 113.689 94.759 -10.125 1.00 38.56 N
ATOM 17 C5 G B 582 114.521 93.944 -10.876 1.00 38.74 C
ATOM 18 C6 G B 582 115.818 94.169 -11.355 1.00 38.06 C
ATOM 19 O6 G B 582 116.520 95.169 -11.219 1.00 39.12 O
ATOM 20 N1 G B 582 116.296 93.076 -12.065 1.00 38.88 N
ATOM 21 C2 G B 582 115.605 91.919 -12.290 1.00 37.73 C
ATOM 22 N2 G B 582 116.224 90.988 -13.009 1.00 36.58 N
ATOM 23 N3 G B 582 114.390 91.696 -11.848 1.00 40.08 N
ATOM 24 C4 G B 582 113.911 92.745 -11.153 1.00 39.23 C
ATOM 25 P U B 583 111.861 89.985 -6.135 1.00 44.76 P
ATOM 26 OP1 U B 583 111.378 88.783 -5.386 1.00 45.20 O
ATOM 27 OP2 U B 583 112.057 91.279 -5.433 1.00 44.16 O
ATOM 28 O5' U B 583 113.220 89.575 -6.825 1.00 46.53 O
TER

Atoms:
C4: (116.619,93.739,-8.262)
N3: (117.592,93.012,-8.903)
OP1: (111.378,88.783,-5.386)
OP2: (112.057,91.279,-5.433)
C2: (117.558,91.677,-9.214)
C1': (116.345,89.570,-9.099)
C3': (115.836,88.409,-7.107)
O5': (113.220,89.575,-6.825)
O4': (114.984,89.175,-9.156)
C5': (113.320,88.365,-7.597)
P: (111.861,89.985,-6.135)
C4': (114.723,88.196,-8.119)
C2': (117.018,88.756,-7.997)
O2': (117.583,87.601,-8.575)
N1: (116.417,91.014,-8.823)
O4: (116.796,94.941,-8.063)
O2: (118.472,91.129,-9.794)
C6: (115.399,91.684,-8.186)
C5: (115.461,92.988,-7.900)
O3': (116.082,87.257,-6.347)
OP1: (108.518,94.689,-5.885)
OP2: (110.480,96.085,-6.762)
C3': (111.173,91.239,-8.287)
C1': (111.685,91.754,-10.538)
C5': (109.139,92.802,-8.227)
O6: (116.520,95.169,-11.219)
O4': (110.423,92.322,-10.229)
C8: (112.611,94.048,-9.963)
C2: (115.605,91.919,-12.290)
C6: (115.818,94.169,-11.355)
C5: (114.521,93.944,-10.876)
C4: (113.911,92.745,-11.153)
P: (109.404,95.096,-7.018)
C4': (109.935,91.766,-8.984)
C2': (112.017,90.737,-9.449)
O2': (111.654,89.454,-9.901)
N1: (116.296,93.076,-12.065)
N2: (116.224,90.988,-13.009)
N3: (114.390,91.696,-11.848)
N7: (113.689,94.759,-10.125)
N9: (112.685,92.813,-10.556)
O5': (110.007,93.791,-7.663)
O3': (110.875,90.230,-7.373)
Image (generated by PyMOL):
PyMOL image
show in jmol