ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1214:A1216

Extra

PDB:
ATOM 1 O3' G A1213 63.997 -80.035 -1.651 1.00 32.81 O
ATOM 2 P A A1214 62.684 -79.642 -0.790 1.00 37.49 P
ATOM 3 OP1 A A1214 61.643 -79.299 -1.764 1.00 56.62 O
ATOM 4 OP2 A A1214 63.076 -78.618 0.231 1.00 41.44 O
ATOM 5 O5' A A1214 62.297 -80.978 -0.084 1.00 33.48 O
ATOM 6 C5' A A1214 61.990 -82.098 -0.873 1.00 53.35 C
ATOM 7 C4' A A1214 60.576 -82.599 -0.685 1.00 45.31 C
ATOM 8 O4' A A1214 59.649 -81.693 -1.350 1.00 45.49 O
ATOM 9 C3' A A1214 60.350 -83.933 -1.350 1.00 49.09 C
ATOM 10 O3' A A1214 59.219 -84.549 -0.773 1.00 48.72 O
ATOM 11 C2' A A1214 60.059 -83.501 -2.774 1.00 40.28 C
ATOM 12 O2' A A1214 59.491 -84.486 -3.595 1.00 58.23 O
ATOM 13 C1' A A1214 59.130 -82.318 -2.525 1.00 41.97 C
ATOM 14 N9 A A1214 59.142 -81.331 -3.612 1.00 37.89 N
ATOM 15 C8 A A1214 59.784 -80.126 -3.583 1.00 46.49 C
ATOM 16 N7 A A1214 59.702 -79.423 -4.670 1.00 45.58 N
ATOM 17 C5 A A1214 58.932 -80.220 -5.486 1.00 45.66 C
ATOM 18 C6 A A1214 58.479 -80.019 -6.790 1.00 53.30 C
ATOM 19 N6 A A1214 58.760 -78.926 -7.502 1.00 55.05 N
ATOM 20 N1 A A1214 57.740 -80.984 -7.361 1.00 48.87 N
ATOM 21 C2 A A1214 57.486 -82.068 -6.628 1.00 53.69 C
ATOM 22 N3 A A1214 57.853 -82.366 -5.389 1.00 55.34 N
ATOM 23 C4 A A1214 58.584 -81.388 -4.862 1.00 41.54 C
ATOM 24 P G A1215 59.409 -85.799 0.196 1.00 38.04 P
ATOM 25 OP1 G A1215 59.914 -85.272 1.464 1.00 47.27 O
ATOM 26 OP2 G A1215 60.217 -86.829 -0.543 1.00 26.18 O
ATOM 27 O5' G A1215 57.921 -86.313 0.377 1.00 56.59 O
TER

ATOM 1 O3' G B1215 54.837 -82.703 1.085 1.00 35.89 O
ATOM 2 P U B1216 54.218 -81.793 2.219 1.00 47.07 P
ATOM 3 OP1 U B1216 54.250 -82.586 3.505 1.00 39.87 O
ATOM 4 OP2 U B1216 52.921 -81.283 1.712 1.00 49.84 O
ATOM 5 O5' U B1216 55.257 -80.607 2.276 1.00 45.98 O
ATOM 6 C5' U B1216 56.471 -80.735 2.975 1.00 32.33 C
ATOM 7 C4' U B1216 57.512 -79.846 2.389 1.00 38.26 C
ATOM 8 O4' U B1216 57.896 -80.396 1.124 1.00 48.05 O
ATOM 9 C3' U B1216 57.084 -78.408 2.067 1.00 34.73 C
ATOM 10 O3' U B1216 57.199 -77.531 3.175 1.00 29.41 O
ATOM 11 C2' U B1216 58.024 -78.030 0.931 1.00 54.85 C
ATOM 12 O2' U B1216 59.283 -77.594 1.448 1.00 52.07 O
ATOM 13 C1' U B1216 58.234 -79.374 0.230 1.00 47.93 C
ATOM 14 N1 U B1216 57.432 -79.533 -0.985 1.00 30.56 N
ATOM 15 C2 U B1216 57.448 -78.559 -1.927 1.00 38.94 C
ATOM 16 O2 U B1216 58.050 -77.520 -1.791 1.00 40.82 O
ATOM 17 N3 U B1216 56.700 -78.834 -3.032 1.00 47.05 N
ATOM 18 C4 U B1216 55.981 -79.977 -3.283 1.00 48.82 C
ATOM 19 O4 U B1216 55.364 -80.097 -4.332 1.00 44.88 O
ATOM 20 C5 U B1216 56.037 -80.947 -2.249 1.00 48.55 C
ATOM 21 C6 U B1216 56.754 -80.692 -1.167 1.00 41.69 C
ATOM 22 P A B1217 55.960 -76.621 3.651 1.00 41.77 P
ATOM 23 OP1 A B1217 56.240 -76.202 5.048 1.00 53.56 O
ATOM 24 OP2 A B1217 54.723 -77.377 3.375 1.00 53.85 O
ATOM 25 O5' A B1217 56.029 -75.372 2.700 1.00 30.95 O
TER

Atoms:
OP1: (61.643,-79.299,-1.764)
OP2: (63.076,-78.618,0.231)
C3': (60.350,-83.933,-1.350)
C1': (59.130,-82.318,-2.525)
C5': (61.990,-82.098,-0.873)
O4': (59.649,-81.693,-1.350)
C8: (59.784,-80.126,-3.583)
O2': (59.491,-84.486,-3.595)
C6: (58.479,-80.019,-6.790)
C5: (58.932,-80.220,-5.486)
C4: (58.584,-81.388,-4.862)
P: (62.684,-79.642,-0.790)
C4': (60.576,-82.599,-0.685)
C2': (60.059,-83.501,-2.774)
C2: (57.486,-82.068,-6.628)
N1: (57.740,-80.984,-7.361)
N3: (57.853,-82.366,-5.389)
N6: (58.760,-78.926,-7.502)
N7: (59.702,-79.423,-4.670)
N9: (59.142,-81.331,-3.612)
O5': (62.297,-80.978,-0.084)
O3': (59.219,-84.549,-0.773)
C4: (55.981,-79.977,-3.283)
N3: (56.700,-78.834,-3.032)
OP1: (54.250,-82.586,3.505)
OP2: (52.921,-81.283,1.712)
C2: (57.448,-78.559,-1.927)
C1': (58.234,-79.374,0.230)
C3': (57.084,-78.408,2.067)
O5': (55.257,-80.607,2.276)
O4': (57.896,-80.396,1.124)
C5': (56.471,-80.735,2.975)
P: (54.218,-81.793,2.219)
C4': (57.512,-79.846,2.389)
C2': (58.024,-78.030,0.931)
O2': (59.283,-77.594,1.448)
N1: (57.432,-79.533,-0.985)
O4: (55.364,-80.097,-4.332)
O2: (58.050,-77.520,-1.791)
C6: (56.754,-80.692,-1.167)
C5: (56.037,-80.947,-2.249)
O3': (57.199,-77.531,3.175)
Image (generated by PyMOL):
PyMOL image
show in jmol