Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DVI:B12:B11
Extra
PDB:
ATOM 1 O3' G A 11 -23.206 1.707 -18.483 1.00 61.48 O
ATOM 2 P U A 12 -23.739 2.501 -17.184 1.00 62.19 P
ATOM 3 OP1 U A 12 -25.102 1.999 -16.875 1.00 60.81 O
ATOM 4 OP2 U A 12 -23.524 3.954 -17.424 1.00 60.76 O
ATOM 5 O5' U A 12 -22.764 2.032 -16.015 1.00 60.95 O
ATOM 6 C5' U A 12 -22.730 0.671 -15.599 1.00 57.74 C
ATOM 7 C4' U A 12 -21.601 0.449 -14.621 1.00 57.34 C
ATOM 8 O4' U A 12 -20.323 0.709 -15.265 1.00 56.94 O
ATOM 9 C3' U A 12 -21.567 1.382 -13.426 1.00 57.38 C
ATOM 10 O3' U A 12 -22.497 0.992 -12.427 1.00 58.57 O
ATOM 11 C2' U A 12 -20.124 1.233 -12.962 1.00 55.92 C
ATOM 12 O2' U A 12 -19.895 0.024 -12.266 1.00 53.26 O
ATOM 13 C1' U A 12 -19.391 1.187 -14.303 1.00 54.44 C
ATOM 14 N1 U A 12 -18.908 2.508 -14.732 1.00 52.13 N
ATOM 15 C2 U A 12 -17.709 2.968 -14.196 1.00 49.83 C
ATOM 16 O2 U A 12 -17.059 2.340 -13.372 1.00 46.50 O
ATOM 17 N3 U A 12 -17.306 4.195 -14.654 1.00 48.12 N
ATOM 18 C4 U A 12 -17.966 5.001 -15.558 1.00 49.01 C
ATOM 19 O4 U A 12 -17.472 6.084 -15.870 1.00 50.35 O
ATOM 20 C5 U A 12 -19.200 4.466 -16.053 1.00 49.52 C
ATOM 21 C6 U A 12 -19.616 3.268 -15.636 1.00 50.82 C
ATOM 22 P U A 13 -23.207 2.119 -11.532 1.00 60.08 P
ATOM 23 OP1 U A 13 -23.977 1.423 -10.463 1.00 59.77 O
ATOM 24 OP2 U A 13 -23.903 3.068 -12.449 1.00 56.10 O
ATOM 25 O5' U A 13 -21.982 2.873 -10.847 1.00 56.38 O
TER
ATOM 1 O3' G B 10 -21.552 4.986 -23.576 1.00 60.20 O
ATOM 2 P G B 11 -22.057 5.358 -22.092 1.00 61.35 P
ATOM 3 OP1 G B 11 -23.536 5.514 -22.155 1.00 61.21 O
ATOM 4 OP2 G B 11 -21.214 6.482 -21.594 1.00 58.10 O
ATOM 5 O5' G B 11 -21.725 4.066 -21.218 1.00 58.64 O
ATOM 6 C5' G B 11 -22.435 2.849 -21.426 1.00 58.48 C
ATOM 7 C4' G B 11 -21.890 1.760 -20.532 1.00 58.47 C
ATOM 8 O4' G B 11 -20.476 1.577 -20.816 1.00 56.67 O
ATOM 9 C3' G B 11 -21.928 2.022 -19.033 1.00 58.69 C
ATOM 10 O3' G B 11 -23.206 1.707 -18.483 1.00 61.48 O
ATOM 11 C2' G B 11 -20.853 1.065 -18.530 1.00 57.07 C
ATOM 12 O2' G B 11 -21.300 -0.274 -18.474 1.00 56.75 O
ATOM 13 C1' G B 11 -19.800 1.192 -19.632 1.00 54.94 C
ATOM 14 N9 G B 11 -18.799 2.208 -19.333 1.00 51.93 N
ATOM 15 C8 G B 11 -18.688 3.456 -19.893 1.00 50.71 C
ATOM 16 N7 G B 11 -17.685 4.140 -19.416 1.00 50.90 N
ATOM 17 C5 G B 11 -17.100 3.290 -18.486 1.00 49.18 C
ATOM 18 C6 G B 11 -15.973 3.482 -17.643 1.00 49.24 C
ATOM 19 O6 G B 11 -15.242 4.476 -17.545 1.00 49.84 O
ATOM 20 N1 G B 11 -15.729 2.363 -16.854 1.00 48.53 N
ATOM 21 C2 G B 11 -16.472 1.211 -16.868 1.00 49.03 C
ATOM 22 N2 G B 11 -16.081 0.241 -16.030 1.00 48.31 N
ATOM 23 N3 G B 11 -17.524 1.021 -17.647 1.00 50.12 N
ATOM 24 C4 G B 11 -17.777 2.095 -18.424 1.00 50.23 C
ATOM 25 P U B 12 -23.739 2.501 -17.184 1.00 62.19 P
ATOM 26 OP1 U B 12 -25.102 1.999 -16.875 1.00 60.81 O
ATOM 27 OP2 U B 12 -23.524 3.954 -17.424 1.00 60.76 O
ATOM 28 O5' U B 12 -22.764 2.032 -16.015 1.00 60.95 O
TER
ATOM 2 P U A 12 -23.739 2.501 -17.184 1.00 62.19 P
ATOM 3 OP1 U A 12 -25.102 1.999 -16.875 1.00 60.81 O
ATOM 4 OP2 U A 12 -23.524 3.954 -17.424 1.00 60.76 O
ATOM 5 O5' U A 12 -22.764 2.032 -16.015 1.00 60.95 O
ATOM 6 C5' U A 12 -22.730 0.671 -15.599 1.00 57.74 C
ATOM 7 C4' U A 12 -21.601 0.449 -14.621 1.00 57.34 C
ATOM 8 O4' U A 12 -20.323 0.709 -15.265 1.00 56.94 O
ATOM 9 C3' U A 12 -21.567 1.382 -13.426 1.00 57.38 C
ATOM 10 O3' U A 12 -22.497 0.992 -12.427 1.00 58.57 O
ATOM 11 C2' U A 12 -20.124 1.233 -12.962 1.00 55.92 C
ATOM 12 O2' U A 12 -19.895 0.024 -12.266 1.00 53.26 O
ATOM 13 C1' U A 12 -19.391 1.187 -14.303 1.00 54.44 C
ATOM 14 N1 U A 12 -18.908 2.508 -14.732 1.00 52.13 N
ATOM 15 C2 U A 12 -17.709 2.968 -14.196 1.00 49.83 C
ATOM 16 O2 U A 12 -17.059 2.340 -13.372 1.00 46.50 O
ATOM 17 N3 U A 12 -17.306 4.195 -14.654 1.00 48.12 N
ATOM 18 C4 U A 12 -17.966 5.001 -15.558 1.00 49.01 C
ATOM 19 O4 U A 12 -17.472 6.084 -15.870 1.00 50.35 O
ATOM 20 C5 U A 12 -19.200 4.466 -16.053 1.00 49.52 C
ATOM 21 C6 U A 12 -19.616 3.268 -15.636 1.00 50.82 C
ATOM 22 P U A 13 -23.207 2.119 -11.532 1.00 60.08 P
ATOM 23 OP1 U A 13 -23.977 1.423 -10.463 1.00 59.77 O
ATOM 24 OP2 U A 13 -23.903 3.068 -12.449 1.00 56.10 O
ATOM 25 O5' U A 13 -21.982 2.873 -10.847 1.00 56.38 O
TER
ATOM 1 O3' G B 10 -21.552 4.986 -23.576 1.00 60.20 O
ATOM 2 P G B 11 -22.057 5.358 -22.092 1.00 61.35 P
ATOM 3 OP1 G B 11 -23.536 5.514 -22.155 1.00 61.21 O
ATOM 4 OP2 G B 11 -21.214 6.482 -21.594 1.00 58.10 O
ATOM 5 O5' G B 11 -21.725 4.066 -21.218 1.00 58.64 O
ATOM 6 C5' G B 11 -22.435 2.849 -21.426 1.00 58.48 C
ATOM 7 C4' G B 11 -21.890 1.760 -20.532 1.00 58.47 C
ATOM 8 O4' G B 11 -20.476 1.577 -20.816 1.00 56.67 O
ATOM 9 C3' G B 11 -21.928 2.022 -19.033 1.00 58.69 C
ATOM 10 O3' G B 11 -23.206 1.707 -18.483 1.00 61.48 O
ATOM 11 C2' G B 11 -20.853 1.065 -18.530 1.00 57.07 C
ATOM 12 O2' G B 11 -21.300 -0.274 -18.474 1.00 56.75 O
ATOM 13 C1' G B 11 -19.800 1.192 -19.632 1.00 54.94 C
ATOM 14 N9 G B 11 -18.799 2.208 -19.333 1.00 51.93 N
ATOM 15 C8 G B 11 -18.688 3.456 -19.893 1.00 50.71 C
ATOM 16 N7 G B 11 -17.685 4.140 -19.416 1.00 50.90 N
ATOM 17 C5 G B 11 -17.100 3.290 -18.486 1.00 49.18 C
ATOM 18 C6 G B 11 -15.973 3.482 -17.643 1.00 49.24 C
ATOM 19 O6 G B 11 -15.242 4.476 -17.545 1.00 49.84 O
ATOM 20 N1 G B 11 -15.729 2.363 -16.854 1.00 48.53 N
ATOM 21 C2 G B 11 -16.472 1.211 -16.868 1.00 49.03 C
ATOM 22 N2 G B 11 -16.081 0.241 -16.030 1.00 48.31 N
ATOM 23 N3 G B 11 -17.524 1.021 -17.647 1.00 50.12 N
ATOM 24 C4 G B 11 -17.777 2.095 -18.424 1.00 50.23 C
ATOM 25 P U B 12 -23.739 2.501 -17.184 1.00 62.19 P
ATOM 26 OP1 U B 12 -25.102 1.999 -16.875 1.00 60.81 O
ATOM 27 OP2 U B 12 -23.524 3.954 -17.424 1.00 60.76 O
ATOM 28 O5' U B 12 -22.764 2.032 -16.015 1.00 60.95 O
TER
Atoms:
C4: (-17.966,5.001,-15.558)
N3: (-17.306,4.195,-14.654)
OP1: (-25.102,1.999,-16.875)
OP2: (-23.524,3.954,-17.424)
C2: (-17.709,2.968,-14.196)
C1': (-19.391,1.187,-14.303)
C3': (-21.567,1.382,-13.426)
O5': (-22.764,2.032,-16.015)
O4': (-20.323,0.709,-15.265)
C5': (-22.730,0.671,-15.599)
P: (-23.739,2.501,-17.184)
C4': (-21.601,0.449,-14.621)
C2': (-20.124,1.233,-12.962)
O2': (-19.895,0.024,-12.266)
N1: (-18.908,2.508,-14.732)
O4: (-17.472,6.084,-15.870)
O2: (-17.059,2.340,-13.372)
C6: (-19.616,3.268,-15.636)
C5: (-19.200,4.466,-16.053)
O3': (-22.497,0.992,-12.427)
N3: (-17.306,4.195,-14.654)
OP1: (-25.102,1.999,-16.875)
OP2: (-23.524,3.954,-17.424)
C2: (-17.709,2.968,-14.196)
C1': (-19.391,1.187,-14.303)
C3': (-21.567,1.382,-13.426)
O5': (-22.764,2.032,-16.015)
O4': (-20.323,0.709,-15.265)
C5': (-22.730,0.671,-15.599)
P: (-23.739,2.501,-17.184)
C4': (-21.601,0.449,-14.621)
C2': (-20.124,1.233,-12.962)
O2': (-19.895,0.024,-12.266)
N1: (-18.908,2.508,-14.732)
O4: (-17.472,6.084,-15.870)
O2: (-17.059,2.340,-13.372)
C6: (-19.616,3.268,-15.636)
C5: (-19.200,4.466,-16.053)
O3': (-22.497,0.992,-12.427)
OP1: (-23.536,5.514,-22.155)
OP2: (-21.214,6.482,-21.594)
C3': (-21.928,2.022,-19.033)
C1': (-19.800,1.192,-19.632)
C5': (-22.435,2.849,-21.426)
O6: (-15.242,4.476,-17.545)
O4': (-20.476,1.577,-20.816)
C8: (-18.688,3.456,-19.893)
C2: (-16.472,1.211,-16.868)
C6: (-15.973,3.482,-17.643)
C5: (-17.100,3.290,-18.486)
C4: (-17.777,2.095,-18.424)
P: (-22.057,5.358,-22.092)
C4': (-21.890,1.760,-20.532)
C2': (-20.853,1.065,-18.530)
O2': (-21.300,-0.274,-18.474)
N1: (-15.729,2.363,-16.854)
N2: (-16.081,0.241,-16.030)
N3: (-17.524,1.021,-17.647)
N7: (-17.685,4.140,-19.416)
N9: (-18.799,2.208,-19.333)
O5': (-21.725,4.066,-21.218)
O3': (-23.206,1.707,-18.483)
OP2: (-21.214,6.482,-21.594)
C3': (-21.928,2.022,-19.033)
C1': (-19.800,1.192,-19.632)
C5': (-22.435,2.849,-21.426)
O6: (-15.242,4.476,-17.545)
O4': (-20.476,1.577,-20.816)
C8: (-18.688,3.456,-19.893)
C2: (-16.472,1.211,-16.868)
C6: (-15.973,3.482,-17.643)
C5: (-17.100,3.290,-18.486)
C4: (-17.777,2.095,-18.424)
P: (-22.057,5.358,-22.092)
C4': (-21.890,1.760,-20.532)
C2': (-20.853,1.065,-18.530)
O2': (-21.300,-0.274,-18.474)
N1: (-15.729,2.363,-16.854)
N2: (-16.081,0.241,-16.030)
N3: (-17.524,1.021,-17.647)
N7: (-17.685,4.140,-19.416)
N9: (-18.799,2.208,-19.333)
O5': (-21.725,4.066,-21.218)
O3': (-23.206,1.707,-18.483)
Image (generated by PyMOL):