Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02116:02115
Extra
PDB:
ATOM 1 O3' C A2115 103.393 104.657 67.526 1.00 62.54 O
ATOM 2 P G A2116 101.962 104.716 68.253 1.00 64.39 P
ATOM 3 OP1 G A2116 102.214 105.056 69.677 1.00 65.27 O
ATOM 4 OP2 G A2116 101.203 103.478 67.918 1.00 62.08 O
ATOM 5 O5' G A2116 101.234 105.953 67.556 1.00 62.70 O
ATOM 6 C5' G A2116 101.816 107.276 67.583 1.00 60.26 C
ATOM 7 C4' G A2116 101.041 108.205 66.677 1.00 59.31 C
ATOM 8 O4' G A2116 101.228 107.819 65.292 1.00 58.39 O
ATOM 9 C3' G A2116 99.537 108.158 66.877 1.00 59.04 C
ATOM 10 O3' G A2116 99.138 108.986 67.951 1.00 59.27 O
ATOM 11 C2' G A2116 99.011 108.641 65.538 1.00 58.81 C
ATOM 12 O2' G A2116 99.059 110.045 65.393 1.00 59.25 O
ATOM 13 C1' G A2116 100.012 107.989 64.584 1.00 57.27 C
ATOM 14 N9 G A2116 99.556 106.678 64.144 1.00 55.48 N
ATOM 15 C8 G A2116 99.904 105.457 64.665 1.00 54.66 C
ATOM 16 N7 G A2116 99.335 104.458 64.049 1.00 54.82 N
ATOM 17 C5 G A2116 98.562 105.059 63.065 1.00 55.12 C
ATOM 18 C6 G A2116 97.726 104.486 62.080 1.00 55.46 C
ATOM 19 O6 G A2116 97.498 103.289 61.862 1.00 57.35 O
ATOM 20 N1 G A2116 97.127 105.459 61.293 1.00 54.09 N
ATOM 21 C2 G A2116 97.315 106.811 61.426 1.00 54.36 C
ATOM 22 N2 G A2116 96.643 107.592 60.560 1.00 54.08 N
ATOM 23 N3 G A2116 98.099 107.357 62.335 1.00 53.73 N
ATOM 24 C4 G A2116 98.686 106.429 63.115 1.00 54.72 C
ATOM 25 P G A2117 98.533 108.321 69.277 1.00 61.01 P
ATOM 26 OP1 G A2117 99.431 108.738 70.397 1.00 55.31 O
ATOM 27 OP2 G A2117 98.299 106.870 69.019 1.00 60.27 O
ATOM 28 O5' G A2117 97.106 109.023 69.429 1.00 59.01 O
TER
ATOM 1 O3' C B2114 104.087 99.736 63.909 1.00 62.27 O
ATOM 2 P C B2115 102.835 100.250 64.788 1.00 64.33 P
ATOM 3 OP1 C B2115 102.882 99.525 66.082 1.00 63.99 O
ATOM 4 OP2 C B2115 101.595 100.198 63.964 1.00 62.23 O
ATOM 5 O5' C B2115 103.179 101.782 65.062 1.00 63.93 O
ATOM 6 C5' C B2115 104.404 102.162 65.722 1.00 62.90 C
ATOM 7 C4' C B2115 104.605 103.663 65.646 1.00 63.20 C
ATOM 8 O4' C B2115 104.784 104.068 64.261 1.00 63.40 O
ATOM 9 C3' C B2115 103.449 104.527 66.116 1.00 62.65 C
ATOM 10 O3' C B2115 103.393 104.657 67.526 1.00 62.54 O
ATOM 11 C2' C B2115 103.742 105.853 65.430 1.00 62.42 C
ATOM 12 O2' C B2115 104.769 106.585 66.068 1.00 63.70 O
ATOM 13 C1' C B2115 104.245 105.372 64.072 1.00 61.49 C
ATOM 14 N1 C B2115 103.177 105.305 63.058 1.00 59.91 N
ATOM 15 C2 C B2115 102.870 106.459 62.328 1.00 60.20 C
ATOM 16 O2 C B2115 103.495 107.502 62.564 1.00 61.25 O
ATOM 17 N3 C B2115 101.903 106.408 61.386 1.00 59.61 N
ATOM 18 C4 C B2115 101.251 105.264 61.161 1.00 60.07 C
ATOM 19 N4 C B2115 100.309 105.254 60.219 1.00 59.86 N
ATOM 20 C5 C B2115 101.538 104.075 61.895 1.00 59.57 C
ATOM 21 C6 C B2115 102.496 104.140 62.825 1.00 59.82 C
ATOM 22 P G B2116 101.962 104.716 68.253 1.00 64.39 P
ATOM 23 OP1 G B2116 102.214 105.056 69.677 1.00 65.27 O
ATOM 24 OP2 G B2116 101.203 103.478 67.918 1.00 62.08 O
ATOM 25 O5' G B2116 101.234 105.953 67.556 1.00 62.70 O
TER
ATOM 2 P G A2116 101.962 104.716 68.253 1.00 64.39 P
ATOM 3 OP1 G A2116 102.214 105.056 69.677 1.00 65.27 O
ATOM 4 OP2 G A2116 101.203 103.478 67.918 1.00 62.08 O
ATOM 5 O5' G A2116 101.234 105.953 67.556 1.00 62.70 O
ATOM 6 C5' G A2116 101.816 107.276 67.583 1.00 60.26 C
ATOM 7 C4' G A2116 101.041 108.205 66.677 1.00 59.31 C
ATOM 8 O4' G A2116 101.228 107.819 65.292 1.00 58.39 O
ATOM 9 C3' G A2116 99.537 108.158 66.877 1.00 59.04 C
ATOM 10 O3' G A2116 99.138 108.986 67.951 1.00 59.27 O
ATOM 11 C2' G A2116 99.011 108.641 65.538 1.00 58.81 C
ATOM 12 O2' G A2116 99.059 110.045 65.393 1.00 59.25 O
ATOM 13 C1' G A2116 100.012 107.989 64.584 1.00 57.27 C
ATOM 14 N9 G A2116 99.556 106.678 64.144 1.00 55.48 N
ATOM 15 C8 G A2116 99.904 105.457 64.665 1.00 54.66 C
ATOM 16 N7 G A2116 99.335 104.458 64.049 1.00 54.82 N
ATOM 17 C5 G A2116 98.562 105.059 63.065 1.00 55.12 C
ATOM 18 C6 G A2116 97.726 104.486 62.080 1.00 55.46 C
ATOM 19 O6 G A2116 97.498 103.289 61.862 1.00 57.35 O
ATOM 20 N1 G A2116 97.127 105.459 61.293 1.00 54.09 N
ATOM 21 C2 G A2116 97.315 106.811 61.426 1.00 54.36 C
ATOM 22 N2 G A2116 96.643 107.592 60.560 1.00 54.08 N
ATOM 23 N3 G A2116 98.099 107.357 62.335 1.00 53.73 N
ATOM 24 C4 G A2116 98.686 106.429 63.115 1.00 54.72 C
ATOM 25 P G A2117 98.533 108.321 69.277 1.00 61.01 P
ATOM 26 OP1 G A2117 99.431 108.738 70.397 1.00 55.31 O
ATOM 27 OP2 G A2117 98.299 106.870 69.019 1.00 60.27 O
ATOM 28 O5' G A2117 97.106 109.023 69.429 1.00 59.01 O
TER
ATOM 1 O3' C B2114 104.087 99.736 63.909 1.00 62.27 O
ATOM 2 P C B2115 102.835 100.250 64.788 1.00 64.33 P
ATOM 3 OP1 C B2115 102.882 99.525 66.082 1.00 63.99 O
ATOM 4 OP2 C B2115 101.595 100.198 63.964 1.00 62.23 O
ATOM 5 O5' C B2115 103.179 101.782 65.062 1.00 63.93 O
ATOM 6 C5' C B2115 104.404 102.162 65.722 1.00 62.90 C
ATOM 7 C4' C B2115 104.605 103.663 65.646 1.00 63.20 C
ATOM 8 O4' C B2115 104.784 104.068 64.261 1.00 63.40 O
ATOM 9 C3' C B2115 103.449 104.527 66.116 1.00 62.65 C
ATOM 10 O3' C B2115 103.393 104.657 67.526 1.00 62.54 O
ATOM 11 C2' C B2115 103.742 105.853 65.430 1.00 62.42 C
ATOM 12 O2' C B2115 104.769 106.585 66.068 1.00 63.70 O
ATOM 13 C1' C B2115 104.245 105.372 64.072 1.00 61.49 C
ATOM 14 N1 C B2115 103.177 105.305 63.058 1.00 59.91 N
ATOM 15 C2 C B2115 102.870 106.459 62.328 1.00 60.20 C
ATOM 16 O2 C B2115 103.495 107.502 62.564 1.00 61.25 O
ATOM 17 N3 C B2115 101.903 106.408 61.386 1.00 59.61 N
ATOM 18 C4 C B2115 101.251 105.264 61.161 1.00 60.07 C
ATOM 19 N4 C B2115 100.309 105.254 60.219 1.00 59.86 N
ATOM 20 C5 C B2115 101.538 104.075 61.895 1.00 59.57 C
ATOM 21 C6 C B2115 102.496 104.140 62.825 1.00 59.82 C
ATOM 22 P G B2116 101.962 104.716 68.253 1.00 64.39 P
ATOM 23 OP1 G B2116 102.214 105.056 69.677 1.00 65.27 O
ATOM 24 OP2 G B2116 101.203 103.478 67.918 1.00 62.08 O
ATOM 25 O5' G B2116 101.234 105.953 67.556 1.00 62.70 O
TER
Atoms:
OP1: (102.214,105.056,69.677)
OP2: (101.203,103.478,67.918)
C3': (99.537,108.158,66.877)
C1': (100.012,107.989,64.584)
C5': (101.816,107.276,67.583)
O6: (97.498,103.289,61.862)
O4': (101.228,107.819,65.292)
C8: (99.904,105.457,64.665)
C2: (97.315,106.811,61.426)
C6: (97.726,104.486,62.080)
C5: (98.562,105.059,63.065)
C4: (98.686,106.429,63.115)
P: (101.962,104.716,68.253)
C4': (101.041,108.205,66.677)
C2': (99.011,108.641,65.538)
O2': (99.059,110.045,65.393)
N1: (97.127,105.459,61.293)
N2: (96.643,107.592,60.560)
N3: (98.099,107.357,62.335)
N7: (99.335,104.458,64.049)
N9: (99.556,106.678,64.144)
O5': (101.234,105.953,67.556)
O3': (99.138,108.986,67.951)
OP2: (101.203,103.478,67.918)
C3': (99.537,108.158,66.877)
C1': (100.012,107.989,64.584)
C5': (101.816,107.276,67.583)
O6: (97.498,103.289,61.862)
O4': (101.228,107.819,65.292)
C8: (99.904,105.457,64.665)
C2: (97.315,106.811,61.426)
C6: (97.726,104.486,62.080)
C5: (98.562,105.059,63.065)
C4: (98.686,106.429,63.115)
P: (101.962,104.716,68.253)
C4': (101.041,108.205,66.677)
C2': (99.011,108.641,65.538)
O2': (99.059,110.045,65.393)
N1: (97.127,105.459,61.293)
N2: (96.643,107.592,60.560)
N3: (98.099,107.357,62.335)
N7: (99.335,104.458,64.049)
N9: (99.556,106.678,64.144)
O5': (101.234,105.953,67.556)
O3': (99.138,108.986,67.951)
C2: (102.870,106.459,62.328)
OP1: (102.882,99.525,66.082)
OP2: (101.595,100.198,63.964)
C4: (101.251,105.264,61.161)
O5': (103.179,101.782,65.062)
C3': (103.449,104.527,66.116)
C1': (104.245,105.372,64.072)
O4': (104.784,104.068,64.261)
C5': (104.404,102.162,65.722)
P: (102.835,100.250,64.788)
O2: (103.495,107.502,62.564)
C4': (104.605,103.663,65.646)
C2': (103.742,105.853,65.430)
O2': (104.769,106.585,66.068)
N1: (103.177,105.305,63.058)
N3: (101.903,106.408,61.386)
N4: (100.309,105.254,60.219)
C6: (102.496,104.140,62.825)
C5: (101.538,104.075,61.895)
O3': (103.393,104.657,67.526)
OP1: (102.882,99.525,66.082)
OP2: (101.595,100.198,63.964)
C4: (101.251,105.264,61.161)
O5': (103.179,101.782,65.062)
C3': (103.449,104.527,66.116)
C1': (104.245,105.372,64.072)
O4': (104.784,104.068,64.261)
C5': (104.404,102.162,65.722)
P: (102.835,100.250,64.788)
O2: (103.495,107.502,62.564)
C4': (104.605,103.663,65.646)
C2': (103.742,105.853,65.430)
O2': (104.769,106.585,66.068)
N1: (103.177,105.305,63.058)
N3: (101.903,106.408,61.386)
N4: (100.309,105.254,60.219)
C6: (102.496,104.140,62.825)
C5: (101.538,104.075,61.895)
O3': (103.393,104.657,67.526)
Image (generated by PyMOL):