Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E54:E53
Extra
PDB:
ATOM 1 O3' C A 53 -23.409 19.657 17.102 1.00 51.35 O
ATOM 2 P G A 54 -21.831 19.936 16.976 1.00 52.98 P
ATOM 3 OP1 G A 54 -21.100 18.678 17.281 1.00 53.59 O
ATOM 4 OP2 G A 54 -21.533 21.164 17.757 1.00 49.55 O
ATOM 5 O5' G A 54 -21.633 20.271 15.433 1.00 47.73 O
ATOM 6 C5' G A 54 -21.066 21.506 15.027 1.00 39.30 C
ATOM 7 C4' G A 54 -22.077 22.314 14.253 1.00 34.26 C
ATOM 8 O4' G A 54 -23.268 22.505 15.061 1.00 32.22 O
ATOM 9 C3' G A 54 -21.615 23.718 13.919 1.00 32.54 C
ATOM 10 O3' G A 54 -20.851 23.717 12.724 1.00 31.94 O
ATOM 11 C2' G A 54 -22.928 24.475 13.778 1.00 30.94 C
ATOM 12 O2' G A 54 -23.545 24.279 12.522 1.00 32.79 O
ATOM 13 C1' G A 54 -23.766 23.820 14.877 1.00 30.06 C
ATOM 14 N9 G A 54 -23.695 24.511 16.160 1.00 27.30 N
ATOM 15 C8 G A 54 -23.095 24.054 17.308 1.00 26.76 C
ATOM 16 N7 G A 54 -23.210 24.882 18.310 1.00 25.44 N
ATOM 17 C5 G A 54 -23.926 25.951 17.793 1.00 25.10 C
ATOM 18 C6 G A 54 -24.362 27.150 18.413 1.00 26.32 C
ATOM 19 O6 G A 54 -24.200 27.517 19.585 1.00 27.20 O
ATOM 20 N1 G A 54 -25.053 27.963 17.522 1.00 25.51 N
ATOM 21 C2 G A 54 -25.296 27.663 16.206 1.00 25.75 C
ATOM 22 N2 G A 54 -25.973 28.583 15.507 1.00 26.14 N
ATOM 23 N3 G A 54 -24.903 26.545 15.617 1.00 24.64 N
ATOM 24 C4 G A 54 -24.228 25.741 16.464 1.00 24.88 C
ATOM 25 P A A 55 -19.470 24.525 12.677 1.00 31.18 P
ATOM 26 OP1 A A 55 -19.014 24.609 11.267 1.00 32.45 O
ATOM 27 OP2 A A 55 -18.576 23.933 13.705 1.00 27.62 O
ATOM 28 O5' A A 55 -19.893 25.982 13.158 1.00 32.32 O
TER
ATOM 1 O3' U B 52 -22.989 22.217 22.546 1.00 46.78 O
ATOM 2 P C B 53 -23.403 20.671 22.685 1.00 47.64 P
ATOM 3 OP1 C B 53 -24.286 20.520 23.870 1.00 48.12 O
ATOM 4 OP2 C B 53 -22.156 19.869 22.591 1.00 48.76 O
ATOM 5 O5' C B 53 -24.261 20.385 21.376 1.00 47.13 O
ATOM 6 C5' C B 53 -23.734 20.683 20.092 1.00 45.76 C
ATOM 7 C4' C B 53 -24.705 20.269 19.016 1.00 46.40 C
ATOM 8 O4' C B 53 -25.975 20.939 19.211 1.00 44.76 O
ATOM 9 C3' C B 53 -24.265 20.667 17.620 1.00 48.02 C
ATOM 10 O3' C B 53 -23.409 19.657 17.102 1.00 51.35 O
ATOM 11 C2' C B 53 -25.588 20.750 16.866 1.00 46.42 C
ATOM 12 O2' C B 53 -26.035 19.489 16.414 1.00 47.23 O
ATOM 13 C1' C B 53 -26.536 21.268 17.953 1.00 44.60 C
ATOM 14 N1 C B 53 -26.796 22.717 17.933 1.00 43.98 N
ATOM 15 C2 C B 53 -27.345 23.297 16.782 1.00 44.32 C
ATOM 16 O2 C B 53 -27.571 22.580 15.796 1.00 46.01 O
ATOM 17 N3 C B 53 -27.614 24.623 16.774 1.00 43.25 N
ATOM 18 C4 C B 53 -27.356 25.363 17.856 1.00 44.17 C
ATOM 19 N4 C B 53 -27.648 26.665 17.808 1.00 44.22 N
ATOM 20 C5 C B 53 -26.787 24.800 19.036 1.00 43.71 C
ATOM 21 C6 C B 53 -26.523 23.487 19.029 1.00 44.01 C
ATOM 22 P G B 54 -21.831 19.936 16.976 1.00 52.98 P
ATOM 23 OP1 G B 54 -21.100 18.678 17.281 1.00 53.59 O
ATOM 24 OP2 G B 54 -21.533 21.164 17.757 1.00 49.55 O
ATOM 25 O5' G B 54 -21.633 20.271 15.433 1.00 47.73 O
TER
ATOM 2 P G A 54 -21.831 19.936 16.976 1.00 52.98 P
ATOM 3 OP1 G A 54 -21.100 18.678 17.281 1.00 53.59 O
ATOM 4 OP2 G A 54 -21.533 21.164 17.757 1.00 49.55 O
ATOM 5 O5' G A 54 -21.633 20.271 15.433 1.00 47.73 O
ATOM 6 C5' G A 54 -21.066 21.506 15.027 1.00 39.30 C
ATOM 7 C4' G A 54 -22.077 22.314 14.253 1.00 34.26 C
ATOM 8 O4' G A 54 -23.268 22.505 15.061 1.00 32.22 O
ATOM 9 C3' G A 54 -21.615 23.718 13.919 1.00 32.54 C
ATOM 10 O3' G A 54 -20.851 23.717 12.724 1.00 31.94 O
ATOM 11 C2' G A 54 -22.928 24.475 13.778 1.00 30.94 C
ATOM 12 O2' G A 54 -23.545 24.279 12.522 1.00 32.79 O
ATOM 13 C1' G A 54 -23.766 23.820 14.877 1.00 30.06 C
ATOM 14 N9 G A 54 -23.695 24.511 16.160 1.00 27.30 N
ATOM 15 C8 G A 54 -23.095 24.054 17.308 1.00 26.76 C
ATOM 16 N7 G A 54 -23.210 24.882 18.310 1.00 25.44 N
ATOM 17 C5 G A 54 -23.926 25.951 17.793 1.00 25.10 C
ATOM 18 C6 G A 54 -24.362 27.150 18.413 1.00 26.32 C
ATOM 19 O6 G A 54 -24.200 27.517 19.585 1.00 27.20 O
ATOM 20 N1 G A 54 -25.053 27.963 17.522 1.00 25.51 N
ATOM 21 C2 G A 54 -25.296 27.663 16.206 1.00 25.75 C
ATOM 22 N2 G A 54 -25.973 28.583 15.507 1.00 26.14 N
ATOM 23 N3 G A 54 -24.903 26.545 15.617 1.00 24.64 N
ATOM 24 C4 G A 54 -24.228 25.741 16.464 1.00 24.88 C
ATOM 25 P A A 55 -19.470 24.525 12.677 1.00 31.18 P
ATOM 26 OP1 A A 55 -19.014 24.609 11.267 1.00 32.45 O
ATOM 27 OP2 A A 55 -18.576 23.933 13.705 1.00 27.62 O
ATOM 28 O5' A A 55 -19.893 25.982 13.158 1.00 32.32 O
TER
ATOM 1 O3' U B 52 -22.989 22.217 22.546 1.00 46.78 O
ATOM 2 P C B 53 -23.403 20.671 22.685 1.00 47.64 P
ATOM 3 OP1 C B 53 -24.286 20.520 23.870 1.00 48.12 O
ATOM 4 OP2 C B 53 -22.156 19.869 22.591 1.00 48.76 O
ATOM 5 O5' C B 53 -24.261 20.385 21.376 1.00 47.13 O
ATOM 6 C5' C B 53 -23.734 20.683 20.092 1.00 45.76 C
ATOM 7 C4' C B 53 -24.705 20.269 19.016 1.00 46.40 C
ATOM 8 O4' C B 53 -25.975 20.939 19.211 1.00 44.76 O
ATOM 9 C3' C B 53 -24.265 20.667 17.620 1.00 48.02 C
ATOM 10 O3' C B 53 -23.409 19.657 17.102 1.00 51.35 O
ATOM 11 C2' C B 53 -25.588 20.750 16.866 1.00 46.42 C
ATOM 12 O2' C B 53 -26.035 19.489 16.414 1.00 47.23 O
ATOM 13 C1' C B 53 -26.536 21.268 17.953 1.00 44.60 C
ATOM 14 N1 C B 53 -26.796 22.717 17.933 1.00 43.98 N
ATOM 15 C2 C B 53 -27.345 23.297 16.782 1.00 44.32 C
ATOM 16 O2 C B 53 -27.571 22.580 15.796 1.00 46.01 O
ATOM 17 N3 C B 53 -27.614 24.623 16.774 1.00 43.25 N
ATOM 18 C4 C B 53 -27.356 25.363 17.856 1.00 44.17 C
ATOM 19 N4 C B 53 -27.648 26.665 17.808 1.00 44.22 N
ATOM 20 C5 C B 53 -26.787 24.800 19.036 1.00 43.71 C
ATOM 21 C6 C B 53 -26.523 23.487 19.029 1.00 44.01 C
ATOM 22 P G B 54 -21.831 19.936 16.976 1.00 52.98 P
ATOM 23 OP1 G B 54 -21.100 18.678 17.281 1.00 53.59 O
ATOM 24 OP2 G B 54 -21.533 21.164 17.757 1.00 49.55 O
ATOM 25 O5' G B 54 -21.633 20.271 15.433 1.00 47.73 O
TER
Atoms:
OP1: (-21.100,18.678,17.281)
OP2: (-21.533,21.164,17.757)
C3': (-21.615,23.718,13.919)
C1': (-23.766,23.820,14.877)
C5': (-21.066,21.506,15.027)
O6: (-24.200,27.517,19.585)
O4': (-23.268,22.505,15.061)
C8: (-23.095,24.054,17.308)
C2: (-25.296,27.663,16.206)
C6: (-24.362,27.150,18.413)
C5: (-23.926,25.951,17.793)
C4: (-24.228,25.741,16.464)
P: (-21.831,19.936,16.976)
C4': (-22.077,22.314,14.253)
C2': (-22.928,24.475,13.778)
O2': (-23.545,24.279,12.522)
N1: (-25.053,27.963,17.522)
N2: (-25.973,28.583,15.507)
N3: (-24.903,26.545,15.617)
N7: (-23.210,24.882,18.310)
N9: (-23.695,24.511,16.160)
O5': (-21.633,20.271,15.433)
O3': (-20.851,23.717,12.724)
OP2: (-21.533,21.164,17.757)
C3': (-21.615,23.718,13.919)
C1': (-23.766,23.820,14.877)
C5': (-21.066,21.506,15.027)
O6: (-24.200,27.517,19.585)
O4': (-23.268,22.505,15.061)
C8: (-23.095,24.054,17.308)
C2: (-25.296,27.663,16.206)
C6: (-24.362,27.150,18.413)
C5: (-23.926,25.951,17.793)
C4: (-24.228,25.741,16.464)
P: (-21.831,19.936,16.976)
C4': (-22.077,22.314,14.253)
C2': (-22.928,24.475,13.778)
O2': (-23.545,24.279,12.522)
N1: (-25.053,27.963,17.522)
N2: (-25.973,28.583,15.507)
N3: (-24.903,26.545,15.617)
N7: (-23.210,24.882,18.310)
N9: (-23.695,24.511,16.160)
O5': (-21.633,20.271,15.433)
O3': (-20.851,23.717,12.724)
C2: (-27.345,23.297,16.782)
OP1: (-24.286,20.520,23.870)
OP2: (-22.156,19.869,22.591)
C4: (-27.356,25.363,17.856)
O5': (-24.261,20.385,21.376)
C3': (-24.265,20.667,17.620)
C1': (-26.536,21.268,17.953)
O4': (-25.975,20.939,19.211)
C5': (-23.734,20.683,20.092)
P: (-23.403,20.671,22.685)
O2: (-27.571,22.580,15.796)
C4': (-24.705,20.269,19.016)
C2': (-25.588,20.750,16.866)
O2': (-26.035,19.489,16.414)
N1: (-26.796,22.717,17.933)
N3: (-27.614,24.623,16.774)
N4: (-27.648,26.665,17.808)
C6: (-26.523,23.487,19.029)
C5: (-26.787,24.800,19.036)
O3': (-23.409,19.657,17.102)
OP1: (-24.286,20.520,23.870)
OP2: (-22.156,19.869,22.591)
C4: (-27.356,25.363,17.856)
O5': (-24.261,20.385,21.376)
C3': (-24.265,20.667,17.620)
C1': (-26.536,21.268,17.953)
O4': (-25.975,20.939,19.211)
C5': (-23.734,20.683,20.092)
P: (-23.403,20.671,22.685)
O2: (-27.571,22.580,15.796)
C4': (-24.705,20.269,19.016)
C2': (-25.588,20.750,16.866)
O2': (-26.035,19.489,16.414)
N1: (-26.796,22.717,17.933)
N3: (-27.614,24.623,16.774)
N4: (-27.648,26.665,17.808)
C6: (-26.523,23.487,19.029)
C5: (-26.787,24.800,19.036)
O3': (-23.409,19.657,17.102)
Image (generated by PyMOL):