Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0552:0551
Extra
PDB:
ATOM 1 O3' C A 551 -10.835 96.421 94.429 1.00 69.90 O
ATOM 2 P G A 552 -10.581 95.350 95.600 1.00 71.20 P
ATOM 3 OP1 G A 552 -10.527 93.998 94.974 1.00 70.07 O
ATOM 4 OP2 G A 552 -11.555 95.620 96.687 1.00 71.15 O
ATOM 5 O5' G A 552 -9.136 95.724 96.156 1.00 71.15 O
ATOM 6 C5' G A 552 -8.006 95.829 95.271 1.00 70.37 C
ATOM 7 C4' G A 552 -6.892 96.598 95.938 1.00 69.94 C
ATOM 8 O4' G A 552 -7.360 97.929 96.284 1.00 71.55 O
ATOM 9 C3' G A 552 -6.393 96.046 97.258 1.00 69.23 C
ATOM 10 O3' G A 552 -5.475 94.979 97.053 1.00 67.42 O
ATOM 11 C2' G A 552 -5.723 97.269 97.872 1.00 70.72 C
ATOM 12 O2' G A 552 -4.443 97.509 97.322 1.00 71.89 O
ATOM 13 C1' G A 552 -6.682 98.385 97.445 1.00 72.04 C
ATOM 14 N9 G A 552 -7.670 98.705 98.472 1.00 74.24 N
ATOM 15 C8 G A 552 -8.782 97.966 98.807 1.00 76.00 C
ATOM 16 N7 G A 552 -9.441 98.461 99.820 1.00 77.20 N
ATOM 17 C5 G A 552 -8.732 99.604 100.169 1.00 77.32 C
ATOM 18 C6 G A 552 -8.955 100.544 101.220 1.00 77.81 C
ATOM 19 O6 G A 552 -9.829 100.532 102.097 1.00 78.56 O
ATOM 20 N1 G A 552 -8.013 101.565 101.199 1.00 77.95 N
ATOM 21 C2 G A 552 -6.980 101.667 100.303 1.00 78.09 C
ATOM 22 N2 G A 552 -6.193 102.739 100.452 1.00 78.59 N
ATOM 23 N3 G A 552 -6.741 100.786 99.336 1.00 76.75 N
ATOM 24 C4 G A 552 -7.652 99.787 99.328 1.00 75.76 C
ATOM 25 P A A 553 -5.020 94.060 98.295 1.00 66.34 P
ATOM 26 OP1 A A 553 -5.725 92.759 98.174 1.00 64.48 O
ATOM 27 OP2 A A 553 -5.115 94.837 99.556 1.00 64.86 O
ATOM 28 O5' A A 553 -3.482 93.787 98.007 1.00 65.46 O
TER
ATOM 1 O3' A B 550 -15.745 99.827 95.955 1.00 64.73 O
ATOM 2 P C B 551 -14.932 98.670 96.717 1.00 65.33 P
ATOM 3 OP1 C B 551 -15.613 97.372 96.432 1.00 65.84 O
ATOM 4 OP2 C B 551 -14.721 99.098 98.121 1.00 63.45 O
ATOM 5 O5' C B 551 -13.537 98.628 95.951 1.00 66.77 O
ATOM 6 C5' C B 551 -13.485 98.234 94.570 1.00 66.96 C
ATOM 7 C4' C B 551 -12.103 98.447 94.005 1.00 67.53 C
ATOM 8 O4' C B 551 -11.775 99.857 94.023 1.00 67.14 O
ATOM 9 C3' C B 551 -10.951 97.802 94.752 1.00 67.91 C
ATOM 10 O3' C B 551 -10.835 96.421 94.429 1.00 69.90 O
ATOM 11 C2' C B 551 -9.764 98.610 94.244 1.00 66.74 C
ATOM 12 O2' C B 551 -9.374 98.223 92.943 1.00 65.94 O
ATOM 13 C1' C B 551 -10.373 100.010 94.160 1.00 66.30 C
ATOM 14 N1 C B 551 -10.104 100.860 95.331 1.00 66.35 N
ATOM 15 C2 C B 551 -9.038 101.768 95.270 1.00 66.50 C
ATOM 16 O2 C B 551 -8.341 101.812 94.243 1.00 65.96 O
ATOM 17 N3 C B 551 -8.793 102.572 96.330 1.00 66.02 N
ATOM 18 C4 C B 551 -9.558 102.491 97.418 1.00 66.09 C
ATOM 19 N4 C B 551 -9.281 103.307 98.436 1.00 66.46 N
ATOM 20 C5 C B 551 -10.643 101.570 97.511 1.00 66.43 C
ATOM 21 C6 C B 551 -10.878 100.781 96.456 1.00 66.02 C
ATOM 22 P G B 552 -10.581 95.350 95.600 1.00 71.20 P
ATOM 23 OP1 G B 552 -10.527 93.998 94.974 1.00 70.07 O
ATOM 24 OP2 G B 552 -11.555 95.620 96.687 1.00 71.15 O
ATOM 25 O5' G B 552 -9.136 95.724 96.156 1.00 71.15 O
TER
ATOM 2 P G A 552 -10.581 95.350 95.600 1.00 71.20 P
ATOM 3 OP1 G A 552 -10.527 93.998 94.974 1.00 70.07 O
ATOM 4 OP2 G A 552 -11.555 95.620 96.687 1.00 71.15 O
ATOM 5 O5' G A 552 -9.136 95.724 96.156 1.00 71.15 O
ATOM 6 C5' G A 552 -8.006 95.829 95.271 1.00 70.37 C
ATOM 7 C4' G A 552 -6.892 96.598 95.938 1.00 69.94 C
ATOM 8 O4' G A 552 -7.360 97.929 96.284 1.00 71.55 O
ATOM 9 C3' G A 552 -6.393 96.046 97.258 1.00 69.23 C
ATOM 10 O3' G A 552 -5.475 94.979 97.053 1.00 67.42 O
ATOM 11 C2' G A 552 -5.723 97.269 97.872 1.00 70.72 C
ATOM 12 O2' G A 552 -4.443 97.509 97.322 1.00 71.89 O
ATOM 13 C1' G A 552 -6.682 98.385 97.445 1.00 72.04 C
ATOM 14 N9 G A 552 -7.670 98.705 98.472 1.00 74.24 N
ATOM 15 C8 G A 552 -8.782 97.966 98.807 1.00 76.00 C
ATOM 16 N7 G A 552 -9.441 98.461 99.820 1.00 77.20 N
ATOM 17 C5 G A 552 -8.732 99.604 100.169 1.00 77.32 C
ATOM 18 C6 G A 552 -8.955 100.544 101.220 1.00 77.81 C
ATOM 19 O6 G A 552 -9.829 100.532 102.097 1.00 78.56 O
ATOM 20 N1 G A 552 -8.013 101.565 101.199 1.00 77.95 N
ATOM 21 C2 G A 552 -6.980 101.667 100.303 1.00 78.09 C
ATOM 22 N2 G A 552 -6.193 102.739 100.452 1.00 78.59 N
ATOM 23 N3 G A 552 -6.741 100.786 99.336 1.00 76.75 N
ATOM 24 C4 G A 552 -7.652 99.787 99.328 1.00 75.76 C
ATOM 25 P A A 553 -5.020 94.060 98.295 1.00 66.34 P
ATOM 26 OP1 A A 553 -5.725 92.759 98.174 1.00 64.48 O
ATOM 27 OP2 A A 553 -5.115 94.837 99.556 1.00 64.86 O
ATOM 28 O5' A A 553 -3.482 93.787 98.007 1.00 65.46 O
TER
ATOM 1 O3' A B 550 -15.745 99.827 95.955 1.00 64.73 O
ATOM 2 P C B 551 -14.932 98.670 96.717 1.00 65.33 P
ATOM 3 OP1 C B 551 -15.613 97.372 96.432 1.00 65.84 O
ATOM 4 OP2 C B 551 -14.721 99.098 98.121 1.00 63.45 O
ATOM 5 O5' C B 551 -13.537 98.628 95.951 1.00 66.77 O
ATOM 6 C5' C B 551 -13.485 98.234 94.570 1.00 66.96 C
ATOM 7 C4' C B 551 -12.103 98.447 94.005 1.00 67.53 C
ATOM 8 O4' C B 551 -11.775 99.857 94.023 1.00 67.14 O
ATOM 9 C3' C B 551 -10.951 97.802 94.752 1.00 67.91 C
ATOM 10 O3' C B 551 -10.835 96.421 94.429 1.00 69.90 O
ATOM 11 C2' C B 551 -9.764 98.610 94.244 1.00 66.74 C
ATOM 12 O2' C B 551 -9.374 98.223 92.943 1.00 65.94 O
ATOM 13 C1' C B 551 -10.373 100.010 94.160 1.00 66.30 C
ATOM 14 N1 C B 551 -10.104 100.860 95.331 1.00 66.35 N
ATOM 15 C2 C B 551 -9.038 101.768 95.270 1.00 66.50 C
ATOM 16 O2 C B 551 -8.341 101.812 94.243 1.00 65.96 O
ATOM 17 N3 C B 551 -8.793 102.572 96.330 1.00 66.02 N
ATOM 18 C4 C B 551 -9.558 102.491 97.418 1.00 66.09 C
ATOM 19 N4 C B 551 -9.281 103.307 98.436 1.00 66.46 N
ATOM 20 C5 C B 551 -10.643 101.570 97.511 1.00 66.43 C
ATOM 21 C6 C B 551 -10.878 100.781 96.456 1.00 66.02 C
ATOM 22 P G B 552 -10.581 95.350 95.600 1.00 71.20 P
ATOM 23 OP1 G B 552 -10.527 93.998 94.974 1.00 70.07 O
ATOM 24 OP2 G B 552 -11.555 95.620 96.687 1.00 71.15 O
ATOM 25 O5' G B 552 -9.136 95.724 96.156 1.00 71.15 O
TER
Atoms:
OP1: (-10.527,93.998,94.974)
OP2: (-11.555,95.620,96.687)
C3': (-6.393,96.046,97.258)
C1': (-6.682,98.385,97.445)
C5': (-8.006,95.829,95.271)
O6: (-9.829,100.532,102.097)
O4': (-7.360,97.929,96.284)
C8: (-8.782,97.966,98.807)
C2: (-6.980,101.667,100.303)
C6: (-8.955,100.544,101.220)
C5: (-8.732,99.604,100.169)
C4: (-7.652,99.787,99.328)
P: (-10.581,95.350,95.600)
C4': (-6.892,96.598,95.938)
C2': (-5.723,97.269,97.872)
O2': (-4.443,97.509,97.322)
N1: (-8.013,101.565,101.199)
N2: (-6.193,102.739,100.452)
N3: (-6.741,100.786,99.336)
N7: (-9.441,98.461,99.820)
N9: (-7.670,98.705,98.472)
O5': (-9.136,95.724,96.156)
O3': (-5.475,94.979,97.053)
OP2: (-11.555,95.620,96.687)
C3': (-6.393,96.046,97.258)
C1': (-6.682,98.385,97.445)
C5': (-8.006,95.829,95.271)
O6: (-9.829,100.532,102.097)
O4': (-7.360,97.929,96.284)
C8: (-8.782,97.966,98.807)
C2: (-6.980,101.667,100.303)
C6: (-8.955,100.544,101.220)
C5: (-8.732,99.604,100.169)
C4: (-7.652,99.787,99.328)
P: (-10.581,95.350,95.600)
C4': (-6.892,96.598,95.938)
C2': (-5.723,97.269,97.872)
O2': (-4.443,97.509,97.322)
N1: (-8.013,101.565,101.199)
N2: (-6.193,102.739,100.452)
N3: (-6.741,100.786,99.336)
N7: (-9.441,98.461,99.820)
N9: (-7.670,98.705,98.472)
O5': (-9.136,95.724,96.156)
O3': (-5.475,94.979,97.053)
C2: (-9.038,101.768,95.270)
OP1: (-15.613,97.372,96.432)
OP2: (-14.721,99.098,98.121)
C4: (-9.558,102.491,97.418)
O5': (-13.537,98.628,95.951)
C3': (-10.951,97.802,94.752)
C1': (-10.373,100.010,94.160)
O4': (-11.775,99.857,94.023)
C5': (-13.485,98.234,94.570)
P: (-14.932,98.670,96.717)
O2: (-8.341,101.812,94.243)
C4': (-12.103,98.447,94.005)
C2': (-9.764,98.610,94.244)
O2': (-9.374,98.223,92.943)
N1: (-10.104,100.860,95.331)
N3: (-8.793,102.572,96.330)
N4: (-9.281,103.307,98.436)
C6: (-10.878,100.781,96.456)
C5: (-10.643,101.570,97.511)
O3': (-10.835,96.421,94.429)
OP1: (-15.613,97.372,96.432)
OP2: (-14.721,99.098,98.121)
C4: (-9.558,102.491,97.418)
O5': (-13.537,98.628,95.951)
C3': (-10.951,97.802,94.752)
C1': (-10.373,100.010,94.160)
O4': (-11.775,99.857,94.023)
C5': (-13.485,98.234,94.570)
P: (-14.932,98.670,96.717)
O2: (-8.341,101.812,94.243)
C4': (-12.103,98.447,94.005)
C2': (-9.764,98.610,94.244)
O2': (-9.374,98.223,92.943)
N1: (-10.104,100.860,95.331)
N3: (-8.793,102.572,96.330)
N4: (-9.281,103.307,98.436)
C6: (-10.878,100.781,96.456)
C5: (-10.643,101.570,97.511)
O3': (-10.835,96.421,94.429)
Image (generated by PyMOL):