ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2940:2939

Extra

PDB:
ATOM 1 O3' G A 939 -75.702 15.016 133.798 1.00 92.79 O
ATOM 2 P U A 940 -76.633 16.215 133.298 1.00 92.66 P
ATOM 3 OP1 U A 940 -77.957 16.041 133.946 1.00 94.25 O
ATOM 4 OP2 U A 940 -76.554 16.228 131.827 1.00 91.18 O
ATOM 5 O5' U A 940 -75.909 17.500 133.885 1.00 92.42 O
ATOM 6 C5' U A 940 -75.447 17.525 135.219 1.00 93.45 C
ATOM 7 C4' U A 940 -74.434 18.608 135.407 1.00 92.71 C
ATOM 8 O4' U A 940 -73.159 18.218 134.830 1.00 91.43 O
ATOM 9 C3' U A 940 -74.734 19.912 134.705 1.00 91.89 C
ATOM 10 O3' U A 940 -75.758 20.661 135.331 1.00 93.03 O
ATOM 11 C2' U A 940 -73.367 20.591 134.693 1.00 90.86 C
ATOM 12 O2' U A 940 -73.060 21.155 135.965 1.00 91.85 O
ATOM 13 C1' U A 940 -72.446 19.387 134.453 1.00 90.32 C
ATOM 14 N1 U A 940 -72.041 19.283 133.026 1.00 88.69 N
ATOM 15 C2 U A 940 -70.951 20.059 132.627 1.00 87.47 C
ATOM 16 O2 U A 940 -70.338 20.758 133.424 1.00 87.74 O
ATOM 17 N3 U A 940 -70.596 19.979 131.295 1.00 86.00 N
ATOM 18 C4 U A 940 -71.229 19.208 130.344 1.00 85.66 C
ATOM 19 O4 U A 940 -70.837 19.207 129.190 1.00 84.37 O
ATOM 20 C5 U A 940 -72.343 18.447 130.814 1.00 86.95 C
ATOM 21 C6 U A 940 -72.712 18.502 132.107 1.00 88.39 C
ATOM 22 P U A 941 -77.157 20.881 134.577 1.00 95.21 P
ATOM 23 OP1 U A 941 -78.033 19.741 134.942 1.00 96.42 O
ATOM 24 OP2 U A 941 -76.860 21.115 133.151 1.00 93.55 O
ATOM 25 O5' U A 941 -77.711 22.213 135.229 1.00 95.99 O
TER

ATOM 1 O3' C B 938 -74.064 12.060 128.735 1.00 88.22 O
ATOM 2 P G B 939 -74.962 13.357 129.012 1.00 88.26 P
ATOM 3 OP1 G B 939 -76.371 12.911 128.938 1.00 89.26 O
ATOM 4 OP2 G B 939 -74.510 14.427 128.096 1.00 86.82 O
ATOM 5 O5' G B 939 -74.590 13.730 130.507 1.00 89.29 O
ATOM 6 C5' G B 939 -74.816 12.813 131.565 1.00 90.73 C
ATOM 7 C4' G B 939 -74.223 13.317 132.856 1.00 91.45 C
ATOM 8 O4' G B 939 -72.780 13.189 132.811 1.00 90.56 O
ATOM 9 C3' G B 939 -74.464 14.785 133.163 1.00 91.44 C
ATOM 10 O3' G B 939 -75.702 15.016 133.798 1.00 92.79 O
ATOM 11 C2' G B 939 -73.263 15.177 134.017 1.00 91.42 C
ATOM 12 O2' G B 939 -73.474 14.850 135.383 1.00 93.03 O
ATOM 13 C1' G B 939 -72.172 14.276 133.462 1.00 90.48 C
ATOM 14 N9 G B 939 -71.342 14.985 132.494 1.00 88.82 N
ATOM 15 C8 G B 939 -71.412 15.007 131.124 1.00 87.54 C
ATOM 16 N7 G B 939 -70.478 15.767 130.600 1.00 86.27 N
ATOM 17 C5 G B 939 -69.770 16.267 131.704 1.00 86.77 C
ATOM 18 C6 G B 939 -68.655 17.143 131.811 1.00 86.01 C
ATOM 19 O6 G B 939 -68.008 17.707 130.926 1.00 84.66 O
ATOM 20 N1 G B 939 -68.313 17.348 133.141 1.00 87.06 N
ATOM 21 C2 G B 939 -68.933 16.799 134.229 1.00 88.64 C
ATOM 22 N2 G B 939 -68.444 17.124 135.434 1.00 89.50 N
ATOM 23 N3 G B 939 -69.959 15.991 134.156 1.00 89.37 N
ATOM 24 C4 G B 939 -70.313 15.786 132.877 1.00 88.36 C
ATOM 25 P U B 940 -76.633 16.215 133.298 1.00 92.66 P
ATOM 26 OP1 U B 940 -77.957 16.041 133.946 1.00 94.25 O
ATOM 27 OP2 U B 940 -76.554 16.228 131.827 1.00 91.18 O
ATOM 28 O5' U B 940 -75.909 17.500 133.885 1.00 92.42 O
TER

Atoms:
C4: (-71.229,19.208,130.344)
N3: (-70.596,19.979,131.295)
OP1: (-77.957,16.041,133.946)
OP2: (-76.554,16.228,131.827)
C2: (-70.951,20.059,132.627)
C1': (-72.446,19.387,134.453)
C3': (-74.734,19.912,134.705)
O5': (-75.909,17.500,133.885)
O4': (-73.159,18.218,134.830)
C5': (-75.447,17.525,135.219)
P: (-76.633,16.215,133.298)
C4': (-74.434,18.608,135.407)
C2': (-73.367,20.591,134.693)
O2': (-73.060,21.155,135.965)
N1: (-72.041,19.283,133.026)
O4: (-70.837,19.207,129.190)
O2: (-70.338,20.758,133.424)
C6: (-72.712,18.502,132.107)
C5: (-72.343,18.447,130.814)
O3': (-75.758,20.661,135.331)
OP1: (-76.371,12.911,128.938)
OP2: (-74.510,14.427,128.096)
C3': (-74.464,14.785,133.163)
C1': (-72.172,14.276,133.462)
C5': (-74.816,12.813,131.565)
O6: (-68.008,17.707,130.926)
O4': (-72.780,13.189,132.811)
C8: (-71.412,15.007,131.124)
C2: (-68.933,16.799,134.229)
C6: (-68.655,17.143,131.811)
C5: (-69.770,16.267,131.704)
C4: (-70.313,15.786,132.877)
P: (-74.962,13.357,129.012)
C4': (-74.223,13.317,132.856)
C2': (-73.263,15.177,134.017)
O2': (-73.474,14.850,135.383)
N1: (-68.313,17.348,133.141)
N2: (-68.444,17.124,135.434)
N3: (-69.959,15.991,134.156)
N7: (-70.478,15.767,130.600)
N9: (-71.342,14.985,132.494)
O5': (-74.590,13.730,130.507)
O3': (-75.702,15.016,133.798)
Image (generated by PyMOL):
PyMOL image
show in jmol