Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01217:01216
Extra
PDB:
ATOM 1 O3' C A1216 12.776 104.238 112.941 1.00 39.30 O
ATOM 2 P G A1217 12.807 104.014 111.355 1.00 39.31 P
ATOM 3 OP1 G A1217 12.553 105.344 110.756 1.00 37.91 O
ATOM 4 OP2 G A1217 11.940 102.858 111.000 1.00 37.82 O
ATOM 5 O5' G A1217 14.311 103.597 111.049 1.00 41.55 O
ATOM 6 C5' G A1217 15.400 104.526 111.227 1.00 40.39 C
ATOM 7 C4' G A1217 16.710 103.828 110.957 1.00 40.75 C
ATOM 8 O4' G A1217 16.886 102.759 111.922 1.00 41.21 O
ATOM 9 C3' G A1217 16.767 103.144 109.601 1.00 40.21 C
ATOM 10 O3' G A1217 17.177 104.073 108.601 1.00 38.88 O
ATOM 11 C2' G A1217 17.757 102.008 109.834 1.00 40.26 C
ATOM 12 O2' G A1217 19.104 102.427 109.766 1.00 40.79 O
ATOM 13 C1' G A1217 17.434 101.619 111.281 1.00 40.81 C
ATOM 14 N9 G A1217 16.484 100.522 111.430 1.00 40.79 N
ATOM 15 C8 G A1217 15.112 100.613 111.444 1.00 40.50 C
ATOM 16 N7 G A1217 14.525 99.463 111.625 1.00 39.94 N
ATOM 17 C5 G A1217 15.567 98.555 111.732 1.00 40.01 C
ATOM 18 C6 G A1217 15.545 97.155 111.945 1.00 41.04 C
ATOM 19 O6 G A1217 14.566 96.414 112.095 1.00 45.38 O
ATOM 20 N1 G A1217 16.829 96.621 111.985 1.00 40.64 N
ATOM 21 C2 G A1217 17.989 97.343 111.846 1.00 39.81 C
ATOM 22 N2 G A1217 19.131 96.648 111.931 1.00 36.47 N
ATOM 23 N3 G A1217 18.024 98.653 111.646 1.00 40.89 N
ATOM 24 C4 G A1217 16.785 99.190 111.603 1.00 41.16 C
ATOM 25 P A A1218 16.560 103.982 107.121 1.00 41.84 P
ATOM 26 OP1 A A1218 16.779 105.297 106.461 1.00 39.18 O
ATOM 27 OP2 A A1218 15.182 103.412 107.178 1.00 42.54 O
ATOM 28 O5' A A1218 17.484 102.904 106.409 1.00 38.90 O
TER
ATOM 1 O3' C B1215 9.558 100.399 116.496 1.00 42.26 O
ATOM 2 P C B1216 9.747 100.451 114.908 1.00 42.97 P
ATOM 3 OP1 C B1216 8.560 101.161 114.355 1.00 43.06 O
ATOM 4 OP2 C B1216 10.094 99.093 114.419 1.00 37.95 O
ATOM 5 O5' C B1216 11.019 101.386 114.717 1.00 43.68 O
ATOM 6 C5' C B1216 11.031 102.739 115.211 1.00 41.10 C
ATOM 7 C4' C B1216 12.434 103.293 115.155 1.00 42.54 C
ATOM 8 O4' C B1216 13.289 102.535 116.053 1.00 43.75 O
ATOM 9 C3' C B1216 13.138 103.176 113.807 1.00 41.64 C
ATOM 10 O3' C B1216 12.776 104.238 112.941 1.00 39.30 O
ATOM 11 C2' C B1216 14.603 103.259 114.199 1.00 40.78 C
ATOM 12 O2' C B1216 14.997 104.591 114.461 1.00 39.81 O
ATOM 13 C1' C B1216 14.604 102.478 115.515 1.00 42.13 C
ATOM 14 N1 C B1216 15.014 101.066 115.380 1.00 41.11 N
ATOM 15 C2 C B1216 16.373 100.778 115.186 1.00 39.14 C
ATOM 16 O2 C B1216 17.178 101.713 115.101 1.00 38.41 O
ATOM 17 N3 C B1216 16.771 99.492 115.095 1.00 37.49 N
ATOM 18 C4 C B1216 15.874 98.512 115.182 1.00 37.39 C
ATOM 19 N4 C B1216 16.314 97.258 115.102 1.00 39.32 N
ATOM 20 C5 C B1216 14.486 98.772 115.360 1.00 38.86 C
ATOM 21 C6 C B1216 14.100 100.052 115.452 1.00 39.48 C
ATOM 22 P G B1217 12.807 104.014 111.355 1.00 39.31 P
ATOM 23 OP1 G B1217 12.553 105.344 110.756 1.00 37.91 O
ATOM 24 OP2 G B1217 11.940 102.858 111.000 1.00 37.82 O
ATOM 25 O5' G B1217 14.311 103.597 111.049 1.00 41.55 O
TER
ATOM 2 P G A1217 12.807 104.014 111.355 1.00 39.31 P
ATOM 3 OP1 G A1217 12.553 105.344 110.756 1.00 37.91 O
ATOM 4 OP2 G A1217 11.940 102.858 111.000 1.00 37.82 O
ATOM 5 O5' G A1217 14.311 103.597 111.049 1.00 41.55 O
ATOM 6 C5' G A1217 15.400 104.526 111.227 1.00 40.39 C
ATOM 7 C4' G A1217 16.710 103.828 110.957 1.00 40.75 C
ATOM 8 O4' G A1217 16.886 102.759 111.922 1.00 41.21 O
ATOM 9 C3' G A1217 16.767 103.144 109.601 1.00 40.21 C
ATOM 10 O3' G A1217 17.177 104.073 108.601 1.00 38.88 O
ATOM 11 C2' G A1217 17.757 102.008 109.834 1.00 40.26 C
ATOM 12 O2' G A1217 19.104 102.427 109.766 1.00 40.79 O
ATOM 13 C1' G A1217 17.434 101.619 111.281 1.00 40.81 C
ATOM 14 N9 G A1217 16.484 100.522 111.430 1.00 40.79 N
ATOM 15 C8 G A1217 15.112 100.613 111.444 1.00 40.50 C
ATOM 16 N7 G A1217 14.525 99.463 111.625 1.00 39.94 N
ATOM 17 C5 G A1217 15.567 98.555 111.732 1.00 40.01 C
ATOM 18 C6 G A1217 15.545 97.155 111.945 1.00 41.04 C
ATOM 19 O6 G A1217 14.566 96.414 112.095 1.00 45.38 O
ATOM 20 N1 G A1217 16.829 96.621 111.985 1.00 40.64 N
ATOM 21 C2 G A1217 17.989 97.343 111.846 1.00 39.81 C
ATOM 22 N2 G A1217 19.131 96.648 111.931 1.00 36.47 N
ATOM 23 N3 G A1217 18.024 98.653 111.646 1.00 40.89 N
ATOM 24 C4 G A1217 16.785 99.190 111.603 1.00 41.16 C
ATOM 25 P A A1218 16.560 103.982 107.121 1.00 41.84 P
ATOM 26 OP1 A A1218 16.779 105.297 106.461 1.00 39.18 O
ATOM 27 OP2 A A1218 15.182 103.412 107.178 1.00 42.54 O
ATOM 28 O5' A A1218 17.484 102.904 106.409 1.00 38.90 O
TER
ATOM 1 O3' C B1215 9.558 100.399 116.496 1.00 42.26 O
ATOM 2 P C B1216 9.747 100.451 114.908 1.00 42.97 P
ATOM 3 OP1 C B1216 8.560 101.161 114.355 1.00 43.06 O
ATOM 4 OP2 C B1216 10.094 99.093 114.419 1.00 37.95 O
ATOM 5 O5' C B1216 11.019 101.386 114.717 1.00 43.68 O
ATOM 6 C5' C B1216 11.031 102.739 115.211 1.00 41.10 C
ATOM 7 C4' C B1216 12.434 103.293 115.155 1.00 42.54 C
ATOM 8 O4' C B1216 13.289 102.535 116.053 1.00 43.75 O
ATOM 9 C3' C B1216 13.138 103.176 113.807 1.00 41.64 C
ATOM 10 O3' C B1216 12.776 104.238 112.941 1.00 39.30 O
ATOM 11 C2' C B1216 14.603 103.259 114.199 1.00 40.78 C
ATOM 12 O2' C B1216 14.997 104.591 114.461 1.00 39.81 O
ATOM 13 C1' C B1216 14.604 102.478 115.515 1.00 42.13 C
ATOM 14 N1 C B1216 15.014 101.066 115.380 1.00 41.11 N
ATOM 15 C2 C B1216 16.373 100.778 115.186 1.00 39.14 C
ATOM 16 O2 C B1216 17.178 101.713 115.101 1.00 38.41 O
ATOM 17 N3 C B1216 16.771 99.492 115.095 1.00 37.49 N
ATOM 18 C4 C B1216 15.874 98.512 115.182 1.00 37.39 C
ATOM 19 N4 C B1216 16.314 97.258 115.102 1.00 39.32 N
ATOM 20 C5 C B1216 14.486 98.772 115.360 1.00 38.86 C
ATOM 21 C6 C B1216 14.100 100.052 115.452 1.00 39.48 C
ATOM 22 P G B1217 12.807 104.014 111.355 1.00 39.31 P
ATOM 23 OP1 G B1217 12.553 105.344 110.756 1.00 37.91 O
ATOM 24 OP2 G B1217 11.940 102.858 111.000 1.00 37.82 O
ATOM 25 O5' G B1217 14.311 103.597 111.049 1.00 41.55 O
TER
Atoms:
OP1: (12.553,105.344,110.756)
OP2: (11.940,102.858,111.000)
C3': (16.767,103.144,109.601)
C1': (17.434,101.619,111.281)
C5': (15.400,104.526,111.227)
O6: (14.566,96.414,112.095)
O4': (16.886,102.759,111.922)
C8: (15.112,100.613,111.444)
C2: (17.989,97.343,111.846)
C6: (15.545,97.155,111.945)
C5: (15.567,98.555,111.732)
C4: (16.785,99.190,111.603)
P: (12.807,104.014,111.355)
C4': (16.710,103.828,110.957)
C2': (17.757,102.008,109.834)
O2': (19.104,102.427,109.766)
N1: (16.829,96.621,111.985)
N2: (19.131,96.648,111.931)
N3: (18.024,98.653,111.646)
N7: (14.525,99.463,111.625)
N9: (16.484,100.522,111.430)
O5': (14.311,103.597,111.049)
O3': (17.177,104.073,108.601)
OP2: (11.940,102.858,111.000)
C3': (16.767,103.144,109.601)
C1': (17.434,101.619,111.281)
C5': (15.400,104.526,111.227)
O6: (14.566,96.414,112.095)
O4': (16.886,102.759,111.922)
C8: (15.112,100.613,111.444)
C2: (17.989,97.343,111.846)
C6: (15.545,97.155,111.945)
C5: (15.567,98.555,111.732)
C4: (16.785,99.190,111.603)
P: (12.807,104.014,111.355)
C4': (16.710,103.828,110.957)
C2': (17.757,102.008,109.834)
O2': (19.104,102.427,109.766)
N1: (16.829,96.621,111.985)
N2: (19.131,96.648,111.931)
N3: (18.024,98.653,111.646)
N7: (14.525,99.463,111.625)
N9: (16.484,100.522,111.430)
O5': (14.311,103.597,111.049)
O3': (17.177,104.073,108.601)
C2: (16.373,100.778,115.186)
OP1: (8.560,101.161,114.355)
OP2: (10.094,99.093,114.419)
C4: (15.874,98.512,115.182)
O5': (11.019,101.386,114.717)
C3': (13.138,103.176,113.807)
C1': (14.604,102.478,115.515)
O4': (13.289,102.535,116.053)
C5': (11.031,102.739,115.211)
P: (9.747,100.451,114.908)
O2: (17.178,101.713,115.101)
C4': (12.434,103.293,115.155)
C2': (14.603,103.259,114.199)
O2': (14.997,104.591,114.461)
N1: (15.014,101.066,115.380)
N3: (16.771,99.492,115.095)
N4: (16.314,97.258,115.102)
C6: (14.100,100.052,115.452)
C5: (14.486,98.772,115.360)
O3': (12.776,104.238,112.941)
OP1: (8.560,101.161,114.355)
OP2: (10.094,99.093,114.419)
C4: (15.874,98.512,115.182)
O5': (11.019,101.386,114.717)
C3': (13.138,103.176,113.807)
C1': (14.604,102.478,115.515)
O4': (13.289,102.535,116.053)
C5': (11.031,102.739,115.211)
P: (9.747,100.451,114.908)
O2: (17.178,101.713,115.101)
C4': (12.434,103.293,115.155)
C2': (14.603,103.259,114.199)
O2': (14.997,104.591,114.461)
N1: (15.014,101.066,115.380)
N3: (16.771,99.492,115.095)
N4: (16.314,97.258,115.102)
C6: (14.100,100.052,115.452)
C5: (14.486,98.772,115.360)
O3': (12.776,104.238,112.941)
Image (generated by PyMOL):