Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0345:0347
Extra
PDB:
ATOM 1 O3' C A 344 53.245 120.628 15.320 1.00 68.17 O
ATOM 2 P A A 345 54.273 120.248 14.137 1.00 70.14 P
ATOM 3 OP1 A A 345 53.476 119.885 12.934 1.00 69.77 O
ATOM 4 OP2 A A 345 55.290 119.291 14.661 1.00 68.78 O
ATOM 5 O5' A A 345 55.018 121.616 13.822 1.00 70.82 O
ATOM 6 C5' A A 345 56.222 121.628 13.044 1.00 72.40 C
ATOM 7 C4' A A 345 56.317 122.908 12.257 1.00 73.31 C
ATOM 8 O4' A A 345 55.305 122.908 11.209 1.00 74.45 O
ATOM 9 C3' A A 345 56.103 124.186 13.059 1.00 73.67 C
ATOM 10 O3' A A 345 56.965 125.186 12.546 1.00 75.09 O
ATOM 11 C2' A A 345 54.644 124.529 12.762 1.00 74.20 C
ATOM 12 O2' A A 345 54.345 125.908 12.878 1.00 73.30 O
ATOM 13 C1' A A 345 54.521 124.078 11.309 1.00 74.20 C
ATOM 14 N9 A A 345 53.151 123.771 10.889 1.00 74.60 N
ATOM 15 C8 A A 345 52.391 122.665 11.189 1.00 74.96 C
ATOM 16 N7 A A 345 51.186 122.694 10.670 1.00 75.33 N
ATOM 17 C5 A A 345 51.148 123.898 9.977 1.00 75.28 C
ATOM 18 C6 A A 345 50.139 124.526 9.209 1.00 75.09 C
ATOM 19 N6 A A 345 48.926 124.003 8.999 1.00 74.12 N
ATOM 20 N1 A A 345 50.426 125.727 8.659 1.00 75.09 N
ATOM 21 C2 A A 345 51.643 126.254 8.863 1.00 75.17 C
ATOM 22 N3 A A 345 52.671 125.763 9.558 1.00 75.67 N
ATOM 23 C4 A A 345 52.355 124.570 10.099 1.00 75.45 C
ATOM 24 P G A 346 58.354 125.497 13.290 1.00 75.86 P
ATOM 25 OP1 G A 346 58.751 124.296 14.062 1.00 76.20 O
ATOM 26 OP2 G A 346 58.212 126.803 13.980 1.00 75.96 O
ATOM 27 O5' G A 346 59.399 125.643 12.097 1.00 77.76 O
TER
ATOM 1 O3' G B 346 59.127 123.464 8.595 1.00 80.55 O
ATOM 2 P U B 347 60.020 122.365 7.820 1.00 80.97 P
ATOM 3 OP1 U B 347 61.353 122.216 8.472 1.00 80.71 O
ATOM 4 OP2 U B 347 59.943 122.689 6.370 1.00 81.94 O
ATOM 5 O5' U B 347 59.196 121.012 8.013 1.00 80.48 O
ATOM 6 C5' U B 347 59.319 120.215 9.214 1.00 78.94 C
ATOM 7 C4' U B 347 57.989 119.580 9.561 1.00 78.38 C
ATOM 8 O4' U B 347 57.044 120.618 9.926 1.00 77.51 O
ATOM 9 C3' U B 347 57.298 118.816 8.440 1.00 79.00 C
ATOM 10 O3' U B 347 57.801 117.480 8.352 1.00 82.49 O
ATOM 11 C2' U B 347 55.832 118.859 8.862 1.00 77.15 C
ATOM 12 O2' U B 347 55.501 117.885 9.832 1.00 75.73 O
ATOM 13 C1' U B 347 55.740 120.240 9.519 1.00 75.96 C
ATOM 14 N1 U B 347 55.160 121.320 8.700 1.00 74.53 N
ATOM 15 C2 U B 347 53.810 121.234 8.382 1.00 73.63 C
ATOM 16 O2 U B 347 53.107 120.289 8.706 1.00 73.34 O
ATOM 17 N3 U B 347 53.314 122.298 7.667 1.00 73.34 N
ATOM 18 C4 U B 347 54.008 123.413 7.239 1.00 73.07 C
ATOM 19 O4 U B 347 53.401 124.312 6.654 1.00 72.25 O
ATOM 20 C5 U B 347 55.400 123.419 7.581 1.00 72.55 C
ATOM 21 C6 U B 347 55.918 122.399 8.277 1.00 73.20 C
ATOM 22 P A B 348 57.788 116.701 6.940 1.00 84.08 P
ATOM 23 OP1 A B 348 58.376 115.352 7.182 1.00 82.89 O
ATOM 24 OP2 A B 348 58.387 117.583 5.906 1.00 83.55 O
ATOM 25 O5' A B 348 56.237 116.530 6.606 1.00 83.47 O
TER
ATOM 2 P A A 345 54.273 120.248 14.137 1.00 70.14 P
ATOM 3 OP1 A A 345 53.476 119.885 12.934 1.00 69.77 O
ATOM 4 OP2 A A 345 55.290 119.291 14.661 1.00 68.78 O
ATOM 5 O5' A A 345 55.018 121.616 13.822 1.00 70.82 O
ATOM 6 C5' A A 345 56.222 121.628 13.044 1.00 72.40 C
ATOM 7 C4' A A 345 56.317 122.908 12.257 1.00 73.31 C
ATOM 8 O4' A A 345 55.305 122.908 11.209 1.00 74.45 O
ATOM 9 C3' A A 345 56.103 124.186 13.059 1.00 73.67 C
ATOM 10 O3' A A 345 56.965 125.186 12.546 1.00 75.09 O
ATOM 11 C2' A A 345 54.644 124.529 12.762 1.00 74.20 C
ATOM 12 O2' A A 345 54.345 125.908 12.878 1.00 73.30 O
ATOM 13 C1' A A 345 54.521 124.078 11.309 1.00 74.20 C
ATOM 14 N9 A A 345 53.151 123.771 10.889 1.00 74.60 N
ATOM 15 C8 A A 345 52.391 122.665 11.189 1.00 74.96 C
ATOM 16 N7 A A 345 51.186 122.694 10.670 1.00 75.33 N
ATOM 17 C5 A A 345 51.148 123.898 9.977 1.00 75.28 C
ATOM 18 C6 A A 345 50.139 124.526 9.209 1.00 75.09 C
ATOM 19 N6 A A 345 48.926 124.003 8.999 1.00 74.12 N
ATOM 20 N1 A A 345 50.426 125.727 8.659 1.00 75.09 N
ATOM 21 C2 A A 345 51.643 126.254 8.863 1.00 75.17 C
ATOM 22 N3 A A 345 52.671 125.763 9.558 1.00 75.67 N
ATOM 23 C4 A A 345 52.355 124.570 10.099 1.00 75.45 C
ATOM 24 P G A 346 58.354 125.497 13.290 1.00 75.86 P
ATOM 25 OP1 G A 346 58.751 124.296 14.062 1.00 76.20 O
ATOM 26 OP2 G A 346 58.212 126.803 13.980 1.00 75.96 O
ATOM 27 O5' G A 346 59.399 125.643 12.097 1.00 77.76 O
TER
ATOM 1 O3' G B 346 59.127 123.464 8.595 1.00 80.55 O
ATOM 2 P U B 347 60.020 122.365 7.820 1.00 80.97 P
ATOM 3 OP1 U B 347 61.353 122.216 8.472 1.00 80.71 O
ATOM 4 OP2 U B 347 59.943 122.689 6.370 1.00 81.94 O
ATOM 5 O5' U B 347 59.196 121.012 8.013 1.00 80.48 O
ATOM 6 C5' U B 347 59.319 120.215 9.214 1.00 78.94 C
ATOM 7 C4' U B 347 57.989 119.580 9.561 1.00 78.38 C
ATOM 8 O4' U B 347 57.044 120.618 9.926 1.00 77.51 O
ATOM 9 C3' U B 347 57.298 118.816 8.440 1.00 79.00 C
ATOM 10 O3' U B 347 57.801 117.480 8.352 1.00 82.49 O
ATOM 11 C2' U B 347 55.832 118.859 8.862 1.00 77.15 C
ATOM 12 O2' U B 347 55.501 117.885 9.832 1.00 75.73 O
ATOM 13 C1' U B 347 55.740 120.240 9.519 1.00 75.96 C
ATOM 14 N1 U B 347 55.160 121.320 8.700 1.00 74.53 N
ATOM 15 C2 U B 347 53.810 121.234 8.382 1.00 73.63 C
ATOM 16 O2 U B 347 53.107 120.289 8.706 1.00 73.34 O
ATOM 17 N3 U B 347 53.314 122.298 7.667 1.00 73.34 N
ATOM 18 C4 U B 347 54.008 123.413 7.239 1.00 73.07 C
ATOM 19 O4 U B 347 53.401 124.312 6.654 1.00 72.25 O
ATOM 20 C5 U B 347 55.400 123.419 7.581 1.00 72.55 C
ATOM 21 C6 U B 347 55.918 122.399 8.277 1.00 73.20 C
ATOM 22 P A B 348 57.788 116.701 6.940 1.00 84.08 P
ATOM 23 OP1 A B 348 58.376 115.352 7.182 1.00 82.89 O
ATOM 24 OP2 A B 348 58.387 117.583 5.906 1.00 83.55 O
ATOM 25 O5' A B 348 56.237 116.530 6.606 1.00 83.47 O
TER
Atoms:
OP1: (53.476,119.885,12.934)
OP2: (55.290,119.291,14.661)
C3': (56.103,124.186,13.059)
C1': (54.521,124.078,11.309)
C5': (56.222,121.628,13.044)
O4': (55.305,122.908,11.209)
C8: (52.391,122.665,11.189)
O2': (54.345,125.908,12.878)
C6: (50.139,124.526,9.209)
C5: (51.148,123.898,9.977)
C4: (52.355,124.570,10.099)
P: (54.273,120.248,14.137)
C4': (56.317,122.908,12.257)
C2': (54.644,124.529,12.762)
C2: (51.643,126.254,8.863)
N1: (50.426,125.727,8.659)
N3: (52.671,125.763,9.558)
N6: (48.926,124.003,8.999)
N7: (51.186,122.694,10.670)
N9: (53.151,123.771,10.889)
O5': (55.018,121.616,13.822)
O3': (56.965,125.186,12.546)
OP2: (55.290,119.291,14.661)
C3': (56.103,124.186,13.059)
C1': (54.521,124.078,11.309)
C5': (56.222,121.628,13.044)
O4': (55.305,122.908,11.209)
C8: (52.391,122.665,11.189)
O2': (54.345,125.908,12.878)
C6: (50.139,124.526,9.209)
C5: (51.148,123.898,9.977)
C4: (52.355,124.570,10.099)
P: (54.273,120.248,14.137)
C4': (56.317,122.908,12.257)
C2': (54.644,124.529,12.762)
C2: (51.643,126.254,8.863)
N1: (50.426,125.727,8.659)
N3: (52.671,125.763,9.558)
N6: (48.926,124.003,8.999)
N7: (51.186,122.694,10.670)
N9: (53.151,123.771,10.889)
O5': (55.018,121.616,13.822)
O3': (56.965,125.186,12.546)
C4: (54.008,123.413,7.239)
N3: (53.314,122.298,7.667)
OP1: (61.353,122.216,8.472)
OP2: (59.943,122.689,6.370)
C2: (53.810,121.234,8.382)
C1': (55.740,120.240,9.519)
C3': (57.298,118.816,8.440)
O5': (59.196,121.012,8.013)
O4': (57.044,120.618,9.926)
C5': (59.319,120.215,9.214)
P: (60.020,122.365,7.820)
C4': (57.989,119.580,9.561)
C2': (55.832,118.859,8.862)
O2': (55.501,117.885,9.832)
N1: (55.160,121.320,8.700)
O4: (53.401,124.312,6.654)
O2: (53.107,120.289,8.706)
C6: (55.918,122.399,8.277)
C5: (55.400,123.419,7.581)
O3': (57.801,117.480,8.352)
N3: (53.314,122.298,7.667)
OP1: (61.353,122.216,8.472)
OP2: (59.943,122.689,6.370)
C2: (53.810,121.234,8.382)
C1': (55.740,120.240,9.519)
C3': (57.298,118.816,8.440)
O5': (59.196,121.012,8.013)
O4': (57.044,120.618,9.926)
C5': (59.319,120.215,9.214)
P: (60.020,122.365,7.820)
C4': (57.989,119.580,9.561)
C2': (55.832,118.859,8.862)
O2': (55.501,117.885,9.832)
N1: (55.160,121.320,8.700)
O4: (53.401,124.312,6.654)
O2: (53.107,120.289,8.706)
C6: (55.918,122.399,8.277)
C5: (55.400,123.419,7.581)
O3': (57.801,117.480,8.352)
Image (generated by PyMOL):