Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2458:A2487
Extra
PDB:
ATOM 1 O3' U A2457 -14.838 106.567 162.785 1.00 6.97 O
ATOM 2 P G A2458 -14.484 107.782 161.798 1.00 15.89 P
ATOM 3 OP1 G A2458 -13.513 107.306 160.767 1.00 15.89 O
ATOM 4 OP2 G A2458 -14.155 108.984 162.613 1.00 15.89 O
ATOM 5 O5' G A2458 -15.890 108.016 161.106 1.00 5.11 O
ATOM 6 C5' G A2458 -16.171 109.227 160.485 1.00 5.11 C
ATOM 7 C4' G A2458 -17.553 109.199 159.966 1.00 5.11 C
ATOM 8 O4' G A2458 -18.421 108.830 161.067 1.00 5.11 O
ATOM 9 C3' G A2458 -17.976 110.564 159.456 1.00 5.11 C
ATOM 10 O3' G A2458 -18.718 110.480 158.244 1.00 5.11 O
ATOM 11 C2' G A2458 -18.792 111.127 160.613 1.00 5.11 C
ATOM 12 O2' G A2458 -19.796 112.018 160.138 1.00 5.11 O
ATOM 13 C1' G A2458 -19.358 109.861 161.286 1.00 5.11 C
ATOM 14 N9 G A2458 -19.567 110.027 162.731 1.00 8.08 N
ATOM 15 C8 G A2458 -20.777 110.150 163.382 1.00 8.08 C
ATOM 16 N7 G A2458 -20.654 110.398 164.658 1.00 8.08 N
ATOM 17 C5 G A2458 -19.280 110.420 164.870 1.00 8.08 C
ATOM 18 C6 G A2458 -18.529 110.681 166.057 1.00 8.08 C
ATOM 19 O6 G A2458 -18.943 110.971 167.196 1.00 8.08 O
ATOM 20 N1 G A2458 -17.165 110.590 165.825 1.00 8.08 N
ATOM 21 C2 G A2458 -16.592 110.294 164.616 1.00 8.08 C
ATOM 22 N2 G A2458 -15.255 110.224 164.604 1.00 8.08 N
ATOM 23 N3 G A2458 -17.271 110.076 163.501 1.00 8.08 N
ATOM 24 C4 G A2458 -18.598 110.157 163.698 1.00 8.08 C
ATOM 25 P G A2459 -17.944 110.215 156.845 1.00 27.39 P
ATOM 26 OP1 G A2459 -16.473 110.091 157.063 1.00 38.47 O
ATOM 27 OP2 G A2459 -18.449 111.224 155.862 1.00 38.47 O
ATOM 28 O5' G A2459 -18.473 108.754 156.468 1.00 6.09 O
TER
ATOM 1 O3' U B2486 -11.666 117.310 163.405 1.00 37.42 O
ATOM 2 P C B2487 -12.129 115.856 163.906 1.00 43.98 P
ATOM 3 OP1 C B2487 -11.014 115.370 164.749 1.00 4.88 O
ATOM 4 OP2 C B2487 -12.569 115.039 162.746 1.00 4.88 O
ATOM 5 O5' C B2487 -13.401 116.133 164.823 1.00 37.36 O
ATOM 6 C5' C B2487 -13.265 116.714 166.129 1.00 37.36 C
ATOM 7 C4' C B2487 -14.104 115.952 167.121 1.00 37.36 C
ATOM 8 O4' C B2487 -15.455 115.923 166.634 1.00 37.36 O
ATOM 9 C3' C B2487 -13.728 114.488 167.294 1.00 37.36 C
ATOM 10 O3' C B2487 -12.652 114.374 168.256 1.00 37.36 O
ATOM 11 C2' C B2487 -15.050 113.767 167.605 1.00 37.36 C
ATOM 12 O2' C B2487 -15.340 113.448 168.952 1.00 37.36 O
ATOM 13 C1' C B2487 -16.093 114.771 167.120 1.00 37.36 C
ATOM 14 N1 C B2487 -17.057 114.304 166.128 1.00 11.51 N
ATOM 15 C2 C B2487 -18.406 114.349 166.467 1.00 11.51 C
ATOM 16 O2 C B2487 -18.726 114.746 167.616 1.00 11.51 O
ATOM 17 N3 C B2487 -19.330 113.959 165.554 1.00 11.51 N
ATOM 18 C4 C B2487 -18.944 113.525 164.361 1.00 11.51 C
ATOM 19 N4 C B2487 -19.890 113.143 163.506 1.00 11.51 N
ATOM 20 C5 C B2487 -17.574 113.456 163.995 1.00 11.51 C
ATOM 21 C6 C B2487 -16.669 113.850 164.902 1.00 11.51 C
ATOM 22 P U B2488 -12.946 114.435 169.856 1.00 16.18 P
ATOM 23 OP1 U B2488 -13.044 113.025 170.361 1.00 30.10 O
ATOM 24 OP2 U B2488 -14.018 115.417 170.180 1.00 30.10 O
ATOM 25 O5' U B2488 -11.605 115.027 170.454 1.00 27.62 O
TER
ATOM 2 P G A2458 -14.484 107.782 161.798 1.00 15.89 P
ATOM 3 OP1 G A2458 -13.513 107.306 160.767 1.00 15.89 O
ATOM 4 OP2 G A2458 -14.155 108.984 162.613 1.00 15.89 O
ATOM 5 O5' G A2458 -15.890 108.016 161.106 1.00 5.11 O
ATOM 6 C5' G A2458 -16.171 109.227 160.485 1.00 5.11 C
ATOM 7 C4' G A2458 -17.553 109.199 159.966 1.00 5.11 C
ATOM 8 O4' G A2458 -18.421 108.830 161.067 1.00 5.11 O
ATOM 9 C3' G A2458 -17.976 110.564 159.456 1.00 5.11 C
ATOM 10 O3' G A2458 -18.718 110.480 158.244 1.00 5.11 O
ATOM 11 C2' G A2458 -18.792 111.127 160.613 1.00 5.11 C
ATOM 12 O2' G A2458 -19.796 112.018 160.138 1.00 5.11 O
ATOM 13 C1' G A2458 -19.358 109.861 161.286 1.00 5.11 C
ATOM 14 N9 G A2458 -19.567 110.027 162.731 1.00 8.08 N
ATOM 15 C8 G A2458 -20.777 110.150 163.382 1.00 8.08 C
ATOM 16 N7 G A2458 -20.654 110.398 164.658 1.00 8.08 N
ATOM 17 C5 G A2458 -19.280 110.420 164.870 1.00 8.08 C
ATOM 18 C6 G A2458 -18.529 110.681 166.057 1.00 8.08 C
ATOM 19 O6 G A2458 -18.943 110.971 167.196 1.00 8.08 O
ATOM 20 N1 G A2458 -17.165 110.590 165.825 1.00 8.08 N
ATOM 21 C2 G A2458 -16.592 110.294 164.616 1.00 8.08 C
ATOM 22 N2 G A2458 -15.255 110.224 164.604 1.00 8.08 N
ATOM 23 N3 G A2458 -17.271 110.076 163.501 1.00 8.08 N
ATOM 24 C4 G A2458 -18.598 110.157 163.698 1.00 8.08 C
ATOM 25 P G A2459 -17.944 110.215 156.845 1.00 27.39 P
ATOM 26 OP1 G A2459 -16.473 110.091 157.063 1.00 38.47 O
ATOM 27 OP2 G A2459 -18.449 111.224 155.862 1.00 38.47 O
ATOM 28 O5' G A2459 -18.473 108.754 156.468 1.00 6.09 O
TER
ATOM 1 O3' U B2486 -11.666 117.310 163.405 1.00 37.42 O
ATOM 2 P C B2487 -12.129 115.856 163.906 1.00 43.98 P
ATOM 3 OP1 C B2487 -11.014 115.370 164.749 1.00 4.88 O
ATOM 4 OP2 C B2487 -12.569 115.039 162.746 1.00 4.88 O
ATOM 5 O5' C B2487 -13.401 116.133 164.823 1.00 37.36 O
ATOM 6 C5' C B2487 -13.265 116.714 166.129 1.00 37.36 C
ATOM 7 C4' C B2487 -14.104 115.952 167.121 1.00 37.36 C
ATOM 8 O4' C B2487 -15.455 115.923 166.634 1.00 37.36 O
ATOM 9 C3' C B2487 -13.728 114.488 167.294 1.00 37.36 C
ATOM 10 O3' C B2487 -12.652 114.374 168.256 1.00 37.36 O
ATOM 11 C2' C B2487 -15.050 113.767 167.605 1.00 37.36 C
ATOM 12 O2' C B2487 -15.340 113.448 168.952 1.00 37.36 O
ATOM 13 C1' C B2487 -16.093 114.771 167.120 1.00 37.36 C
ATOM 14 N1 C B2487 -17.057 114.304 166.128 1.00 11.51 N
ATOM 15 C2 C B2487 -18.406 114.349 166.467 1.00 11.51 C
ATOM 16 O2 C B2487 -18.726 114.746 167.616 1.00 11.51 O
ATOM 17 N3 C B2487 -19.330 113.959 165.554 1.00 11.51 N
ATOM 18 C4 C B2487 -18.944 113.525 164.361 1.00 11.51 C
ATOM 19 N4 C B2487 -19.890 113.143 163.506 1.00 11.51 N
ATOM 20 C5 C B2487 -17.574 113.456 163.995 1.00 11.51 C
ATOM 21 C6 C B2487 -16.669 113.850 164.902 1.00 11.51 C
ATOM 22 P U B2488 -12.946 114.435 169.856 1.00 16.18 P
ATOM 23 OP1 U B2488 -13.044 113.025 170.361 1.00 30.10 O
ATOM 24 OP2 U B2488 -14.018 115.417 170.180 1.00 30.10 O
ATOM 25 O5' U B2488 -11.605 115.027 170.454 1.00 27.62 O
TER
Atoms:
OP1: (-13.513,107.306,160.767)
OP2: (-14.155,108.984,162.613)
C3': (-17.976,110.564,159.456)
C1': (-19.358,109.861,161.286)
C5': (-16.171,109.227,160.485)
O6: (-18.943,110.971,167.196)
O4': (-18.421,108.830,161.067)
C8: (-20.777,110.150,163.382)
C2: (-16.592,110.294,164.616)
C6: (-18.529,110.681,166.057)
C5: (-19.280,110.420,164.870)
C4: (-18.598,110.157,163.698)
P: (-14.484,107.782,161.798)
C4': (-17.553,109.199,159.966)
C2': (-18.792,111.127,160.613)
O2': (-19.796,112.018,160.138)
N1: (-17.165,110.590,165.825)
N2: (-15.255,110.224,164.604)
N3: (-17.271,110.076,163.501)
N7: (-20.654,110.398,164.658)
N9: (-19.567,110.027,162.731)
O5': (-15.890,108.016,161.106)
O3': (-18.718,110.480,158.244)
OP2: (-14.155,108.984,162.613)
C3': (-17.976,110.564,159.456)
C1': (-19.358,109.861,161.286)
C5': (-16.171,109.227,160.485)
O6: (-18.943,110.971,167.196)
O4': (-18.421,108.830,161.067)
C8: (-20.777,110.150,163.382)
C2: (-16.592,110.294,164.616)
C6: (-18.529,110.681,166.057)
C5: (-19.280,110.420,164.870)
C4: (-18.598,110.157,163.698)
P: (-14.484,107.782,161.798)
C4': (-17.553,109.199,159.966)
C2': (-18.792,111.127,160.613)
O2': (-19.796,112.018,160.138)
N1: (-17.165,110.590,165.825)
N2: (-15.255,110.224,164.604)
N3: (-17.271,110.076,163.501)
N7: (-20.654,110.398,164.658)
N9: (-19.567,110.027,162.731)
O5': (-15.890,108.016,161.106)
O3': (-18.718,110.480,158.244)
C2: (-18.406,114.349,166.467)
OP1: (-11.014,115.370,164.749)
OP2: (-12.569,115.039,162.746)
C4: (-18.944,113.525,164.361)
O5': (-13.401,116.133,164.823)
C3': (-13.728,114.488,167.294)
C1': (-16.093,114.771,167.120)
O4': (-15.455,115.923,166.634)
C5': (-13.265,116.714,166.129)
P: (-12.129,115.856,163.906)
O2: (-18.726,114.746,167.616)
C4': (-14.104,115.952,167.121)
C2': (-15.050,113.767,167.605)
O2': (-15.340,113.448,168.952)
N1: (-17.057,114.304,166.128)
N3: (-19.330,113.959,165.554)
N4: (-19.890,113.143,163.506)
C6: (-16.669,113.850,164.902)
C5: (-17.574,113.456,163.995)
O3': (-12.652,114.374,168.256)
OP1: (-11.014,115.370,164.749)
OP2: (-12.569,115.039,162.746)
C4: (-18.944,113.525,164.361)
O5': (-13.401,116.133,164.823)
C3': (-13.728,114.488,167.294)
C1': (-16.093,114.771,167.120)
O4': (-15.455,115.923,166.634)
C5': (-13.265,116.714,166.129)
P: (-12.129,115.856,163.906)
O2: (-18.726,114.746,167.616)
C4': (-14.104,115.952,167.121)
C2': (-15.050,113.767,167.605)
O2': (-15.340,113.448,168.952)
N1: (-17.057,114.304,166.128)
N3: (-19.330,113.959,165.554)
N4: (-19.890,113.143,163.506)
C6: (-16.669,113.850,164.902)
C5: (-17.574,113.456,163.995)
O3': (-12.652,114.374,168.256)
Image (generated by PyMOL):