ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N8R:A575:A577

Extra

PDB:
ATOM 1 O3' C A 574 -13.324 90.276 115.082 1.00 60.08 O
ATOM 2 P A A 575 -13.026 90.777 113.589 1.00 60.98 P
ATOM 3 OP1 A A 575 -12.376 92.117 113.646 1.00 60.89 O
ATOM 4 OP2 A A 575 -14.293 90.615 112.836 1.00 61.36 O
ATOM 5 O5' A A 575 -11.985 89.734 112.993 1.00 59.14 O
ATOM 6 C5' A A 575 -11.841 89.611 111.575 1.00 60.01 C
ATOM 7 C4' A A 575 -10.398 89.401 111.206 1.00 60.38 C
ATOM 8 O4' A A 575 -9.597 90.536 111.649 1.00 61.41 O
ATOM 9 C3' A A 575 -9.737 88.168 111.798 1.00 59.91 C
ATOM 10 O3' A A 575 -8.845 87.651 110.836 1.00 59.41 O
ATOM 11 C2' A A 575 -8.968 88.732 112.989 1.00 59.75 C
ATOM 12 O2' A A 575 -7.839 87.965 113.354 1.00 59.71 O
ATOM 13 C1' A A 575 -8.516 90.075 112.439 1.00 60.04 C
ATOM 14 N9 A A 575 -8.219 91.062 113.479 1.00 60.12 N
ATOM 15 C8 A A 575 -9.095 91.866 114.169 1.00 60.44 C
ATOM 16 N7 A A 575 -8.513 92.675 115.023 1.00 60.43 N
ATOM 17 C5 A A 575 -7.164 92.380 114.894 1.00 59.98 C
ATOM 18 C6 A A 575 -6.019 92.895 115.526 1.00 59.44 C
ATOM 19 N6 A A 575 -6.051 93.857 116.450 1.00 58.36 N
ATOM 20 N1 A A 575 -4.824 92.380 115.172 1.00 59.14 N
ATOM 21 C2 A A 575 -4.790 91.412 114.243 1.00 58.64 C
ATOM 22 N3 A A 575 -5.794 90.845 113.578 1.00 59.37 N
ATOM 23 C4 A A 575 -6.968 91.380 113.952 1.00 60.03 C
ATOM 24 P G A 576 -9.148 86.230 110.171 1.00 60.42 P
ATOM 25 OP1 G A 576 -10.623 86.112 110.048 1.00 61.50 O
ATOM 26 OP2 G A 576 -8.384 85.211 110.937 1.00 59.43 O
ATOM 27 O5' G A 576 -8.559 86.355 108.694 1.00 59.93 O
TER

ATOM 1 O3' G B 576 -7.621 90.211 107.112 1.00 54.25 O
ATOM 2 P U B 577 -8.059 91.139 105.875 1.00 53.65 P
ATOM 3 OP1 U B 577 -8.808 90.310 104.895 1.00 52.35 O
ATOM 4 OP2 U B 577 -6.877 91.928 105.420 1.00 53.14 O
ATOM 5 O5' U B 577 -9.084 92.141 106.563 1.00 52.11 O
ATOM 6 C5' U B 577 -10.414 91.698 106.912 1.00 51.53 C
ATOM 7 C4' U B 577 -10.937 92.474 108.097 1.00 51.40 C
ATOM 8 O4' U B 577 -10.282 92.031 109.313 1.00 50.27 O
ATOM 9 C3' U B 577 -10.677 93.967 108.041 1.00 52.03 C
ATOM 10 O3' U B 577 -11.659 94.656 107.279 1.00 53.08 O
ATOM 11 C2' U B 577 -10.677 94.378 109.507 1.00 52.24 C
ATOM 12 O2' U B 577 -11.966 94.629 110.012 1.00 52.47 O
ATOM 13 C1' U B 577 -10.074 93.138 110.179 1.00 51.76 C
ATOM 14 N1 U B 577 -8.635 93.237 110.495 1.00 51.89 N
ATOM 15 C2 U B 577 -8.229 94.189 111.431 1.00 51.47 C
ATOM 16 O2 U B 577 -9.000 94.957 111.984 1.00 50.88 O
ATOM 17 N3 U B 577 -6.881 94.210 111.690 1.00 50.97 N
ATOM 18 C4 U B 577 -5.912 93.408 111.127 1.00 52.01 C
ATOM 19 O4 U B 577 -4.744 93.509 111.504 1.00 52.36 O
ATOM 20 C5 U B 577 -6.402 92.465 110.169 1.00 52.38 C
ATOM 21 C6 U B 577 -7.708 92.410 109.893 1.00 51.79 C
ATOM 22 P A B 578 -11.247 95.989 106.497 1.00 54.93 P
ATOM 23 OP1 A B 578 -12.419 96.506 105.765 1.00 55.45 O
ATOM 24 OP2 A B 578 -10.008 95.677 105.742 1.00 56.74 O
ATOM 25 O5' A B 578 -10.914 96.997 107.680 1.00 52.58 O
TER

Atoms:
OP1: (-12.376,92.117,113.646)
OP2: (-14.293,90.615,112.836)
C3': (-9.737,88.168,111.798)
C1': (-8.516,90.075,112.439)
C5': (-11.841,89.611,111.575)
O4': (-9.597,90.536,111.649)
C8: (-9.095,91.866,114.169)
O2': (-7.839,87.965,113.354)
C6: (-6.019,92.895,115.526)
C5: (-7.164,92.380,114.894)
C4: (-6.968,91.380,113.952)
P: (-13.026,90.777,113.589)
C4': (-10.398,89.401,111.206)
C2': (-8.968,88.732,112.989)
C2: (-4.790,91.412,114.243)
N1: (-4.824,92.380,115.172)
N3: (-5.794,90.845,113.578)
N6: (-6.051,93.857,116.450)
N7: (-8.513,92.675,115.023)
N9: (-8.219,91.062,113.479)
O5': (-11.985,89.734,112.993)
O3': (-8.845,87.651,110.836)
C4: (-5.912,93.408,111.127)
N3: (-6.881,94.210,111.690)
OP1: (-8.808,90.310,104.895)
OP2: (-6.877,91.928,105.420)
C2: (-8.229,94.189,111.431)
C1': (-10.074,93.138,110.179)
C3': (-10.677,93.967,108.041)
O5': (-9.084,92.141,106.563)
O4': (-10.282,92.031,109.313)
C5': (-10.414,91.698,106.912)
P: (-8.059,91.139,105.875)
C4': (-10.937,92.474,108.097)
C2': (-10.677,94.378,109.507)
O2': (-11.966,94.629,110.012)
N1: (-8.635,93.237,110.495)
O4: (-4.744,93.509,111.504)
O2: (-9.000,94.957,111.984)
C6: (-7.708,92.410,109.893)
C5: (-6.402,92.465,110.169)
O3': (-11.659,94.656,107.279)
Image (generated by PyMOL):
PyMOL image
show in jmol