Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0235:0253
Extra
PDB:
ATOM 1 O3' G A 234 93.614 117.339 -8.177 1.00 59.63 O
ATOM 2 P A A 235 94.090 118.297 -9.370 1.00 59.96 P
ATOM 3 OP1 A A 235 93.596 117.698 -10.640 1.00 60.33 O
ATOM 4 OP2 A A 235 95.551 118.520 -9.184 1.00 58.52 O
ATOM 5 O5' A A 235 93.290 119.650 -9.115 1.00 58.32 O
ATOM 6 C5' A A 235 91.884 119.753 -9.427 1.00 56.38 C
ATOM 7 C4' A A 235 91.271 120.907 -8.669 1.00 56.50 C
ATOM 8 O4' A A 235 91.170 120.568 -7.252 1.00 55.65 O
ATOM 9 C3' A A 235 92.077 122.202 -8.731 1.00 55.86 C
ATOM 10 O3' A A 235 91.190 123.307 -8.642 1.00 56.38 O
ATOM 11 C2' A A 235 92.905 122.124 -7.453 1.00 55.56 C
ATOM 12 O2' A A 235 93.373 123.369 -6.977 1.00 55.70 O
ATOM 13 C1' A A 235 91.881 121.525 -6.491 1.00 55.43 C
ATOM 14 N9 A A 235 92.467 120.873 -5.322 1.00 53.76 N
ATOM 15 C8 A A 235 93.187 119.706 -5.264 1.00 53.62 C
ATOM 16 N7 A A 235 93.594 119.398 -4.058 1.00 52.82 N
ATOM 17 C5 A A 235 93.107 120.431 -3.267 1.00 52.41 C
ATOM 18 C6 A A 235 93.199 120.693 -1.889 1.00 50.80 C
ATOM 19 N6 A A 235 93.847 119.906 -1.026 1.00 50.19 N
ATOM 20 N1 A A 235 92.597 121.805 -1.421 1.00 50.83 N
ATOM 21 C2 A A 235 91.952 122.596 -2.283 1.00 52.00 C
ATOM 22 N3 A A 235 91.798 122.459 -3.597 1.00 53.11 N
ATOM 23 C4 A A 235 92.407 121.343 -4.032 1.00 52.80 C
ATOM 24 P A A 236 90.738 124.069 -9.977 1.00 57.16 P
ATOM 25 OP1 A A 236 91.843 123.891 -10.961 1.00 57.71 O
ATOM 26 OP2 A A 236 90.303 125.444 -9.594 1.00 57.48 O
ATOM 27 O5' A A 236 89.460 123.256 -10.480 1.00 54.62 O
TER
ATOM 1 O3' G B 252 91.083 119.047 3.040 1.00 47.37 O
ATOM 2 P U B 253 89.748 118.735 3.881 1.00 49.19 P
ATOM 3 OP1 U B 253 89.978 119.222 5.272 1.00 48.79 O
ATOM 4 OP2 U B 253 89.399 117.307 3.658 1.00 48.06 O
ATOM 5 O5' U B 253 88.630 119.646 3.193 1.00 48.47 O
ATOM 6 C5' U B 253 88.427 121.017 3.598 1.00 47.79 C
ATOM 7 C4' U B 253 88.021 121.854 2.409 1.00 49.07 C
ATOM 8 O4' U B 253 89.143 121.968 1.496 1.00 48.88 O
ATOM 9 C3' U B 253 86.912 121.258 1.561 1.00 48.57 C
ATOM 10 O3' U B 253 85.628 121.551 2.087 1.00 49.16 O
ATOM 11 C2' U B 253 87.146 121.901 0.201 1.00 47.26 C
ATOM 12 O2' U B 253 86.617 123.210 0.113 1.00 45.98 O
ATOM 13 C1' U B 253 88.676 121.948 0.153 1.00 46.69 C
ATOM 14 N1 U B 253 89.303 120.805 -0.536 1.00 45.53 N
ATOM 15 C2 U B 253 89.163 120.713 -1.914 1.00 45.13 C
ATOM 16 O2 U B 253 88.558 121.540 -2.585 1.00 45.90 O
ATOM 17 N3 U B 253 89.757 119.616 -2.480 1.00 44.96 N
ATOM 18 C4 U B 253 90.472 118.628 -1.833 1.00 46.31 C
ATOM 19 O4 U B 253 90.945 117.688 -2.487 1.00 46.39 O
ATOM 20 C5 U B 253 90.589 118.809 -0.420 1.00 45.13 C
ATOM 21 C6 U B 253 90.012 119.858 0.163 1.00 43.90 C
ATOM 22 P G B 254 84.487 120.429 2.027 1.00 51.25 P
ATOM 23 OP1 G B 254 83.187 121.090 2.366 1.00 49.72 O
ATOM 24 OP2 G B 254 84.958 119.265 2.822 1.00 50.20 O
ATOM 25 O5' G B 254 84.458 119.980 0.496 1.00 52.28 O
TER
ATOM 2 P A A 235 94.090 118.297 -9.370 1.00 59.96 P
ATOM 3 OP1 A A 235 93.596 117.698 -10.640 1.00 60.33 O
ATOM 4 OP2 A A 235 95.551 118.520 -9.184 1.00 58.52 O
ATOM 5 O5' A A 235 93.290 119.650 -9.115 1.00 58.32 O
ATOM 6 C5' A A 235 91.884 119.753 -9.427 1.00 56.38 C
ATOM 7 C4' A A 235 91.271 120.907 -8.669 1.00 56.50 C
ATOM 8 O4' A A 235 91.170 120.568 -7.252 1.00 55.65 O
ATOM 9 C3' A A 235 92.077 122.202 -8.731 1.00 55.86 C
ATOM 10 O3' A A 235 91.190 123.307 -8.642 1.00 56.38 O
ATOM 11 C2' A A 235 92.905 122.124 -7.453 1.00 55.56 C
ATOM 12 O2' A A 235 93.373 123.369 -6.977 1.00 55.70 O
ATOM 13 C1' A A 235 91.881 121.525 -6.491 1.00 55.43 C
ATOM 14 N9 A A 235 92.467 120.873 -5.322 1.00 53.76 N
ATOM 15 C8 A A 235 93.187 119.706 -5.264 1.00 53.62 C
ATOM 16 N7 A A 235 93.594 119.398 -4.058 1.00 52.82 N
ATOM 17 C5 A A 235 93.107 120.431 -3.267 1.00 52.41 C
ATOM 18 C6 A A 235 93.199 120.693 -1.889 1.00 50.80 C
ATOM 19 N6 A A 235 93.847 119.906 -1.026 1.00 50.19 N
ATOM 20 N1 A A 235 92.597 121.805 -1.421 1.00 50.83 N
ATOM 21 C2 A A 235 91.952 122.596 -2.283 1.00 52.00 C
ATOM 22 N3 A A 235 91.798 122.459 -3.597 1.00 53.11 N
ATOM 23 C4 A A 235 92.407 121.343 -4.032 1.00 52.80 C
ATOM 24 P A A 236 90.738 124.069 -9.977 1.00 57.16 P
ATOM 25 OP1 A A 236 91.843 123.891 -10.961 1.00 57.71 O
ATOM 26 OP2 A A 236 90.303 125.444 -9.594 1.00 57.48 O
ATOM 27 O5' A A 236 89.460 123.256 -10.480 1.00 54.62 O
TER
ATOM 1 O3' G B 252 91.083 119.047 3.040 1.00 47.37 O
ATOM 2 P U B 253 89.748 118.735 3.881 1.00 49.19 P
ATOM 3 OP1 U B 253 89.978 119.222 5.272 1.00 48.79 O
ATOM 4 OP2 U B 253 89.399 117.307 3.658 1.00 48.06 O
ATOM 5 O5' U B 253 88.630 119.646 3.193 1.00 48.47 O
ATOM 6 C5' U B 253 88.427 121.017 3.598 1.00 47.79 C
ATOM 7 C4' U B 253 88.021 121.854 2.409 1.00 49.07 C
ATOM 8 O4' U B 253 89.143 121.968 1.496 1.00 48.88 O
ATOM 9 C3' U B 253 86.912 121.258 1.561 1.00 48.57 C
ATOM 10 O3' U B 253 85.628 121.551 2.087 1.00 49.16 O
ATOM 11 C2' U B 253 87.146 121.901 0.201 1.00 47.26 C
ATOM 12 O2' U B 253 86.617 123.210 0.113 1.00 45.98 O
ATOM 13 C1' U B 253 88.676 121.948 0.153 1.00 46.69 C
ATOM 14 N1 U B 253 89.303 120.805 -0.536 1.00 45.53 N
ATOM 15 C2 U B 253 89.163 120.713 -1.914 1.00 45.13 C
ATOM 16 O2 U B 253 88.558 121.540 -2.585 1.00 45.90 O
ATOM 17 N3 U B 253 89.757 119.616 -2.480 1.00 44.96 N
ATOM 18 C4 U B 253 90.472 118.628 -1.833 1.00 46.31 C
ATOM 19 O4 U B 253 90.945 117.688 -2.487 1.00 46.39 O
ATOM 20 C5 U B 253 90.589 118.809 -0.420 1.00 45.13 C
ATOM 21 C6 U B 253 90.012 119.858 0.163 1.00 43.90 C
ATOM 22 P G B 254 84.487 120.429 2.027 1.00 51.25 P
ATOM 23 OP1 G B 254 83.187 121.090 2.366 1.00 49.72 O
ATOM 24 OP2 G B 254 84.958 119.265 2.822 1.00 50.20 O
ATOM 25 O5' G B 254 84.458 119.980 0.496 1.00 52.28 O
TER
Atoms:
OP1: (93.596,117.698,-10.640)
OP2: (95.551,118.520,-9.184)
C3': (92.077,122.202,-8.731)
C1': (91.881,121.525,-6.491)
C5': (91.884,119.753,-9.427)
O4': (91.170,120.568,-7.252)
C8: (93.187,119.706,-5.264)
O2': (93.373,123.369,-6.977)
C6: (93.199,120.693,-1.889)
C5: (93.107,120.431,-3.267)
C4: (92.407,121.343,-4.032)
P: (94.090,118.297,-9.370)
C4': (91.271,120.907,-8.669)
C2': (92.905,122.124,-7.453)
C2: (91.952,122.596,-2.283)
N1: (92.597,121.805,-1.421)
N3: (91.798,122.459,-3.597)
N6: (93.847,119.906,-1.026)
N7: (93.594,119.398,-4.058)
N9: (92.467,120.873,-5.322)
O5': (93.290,119.650,-9.115)
O3': (91.190,123.307,-8.642)
OP2: (95.551,118.520,-9.184)
C3': (92.077,122.202,-8.731)
C1': (91.881,121.525,-6.491)
C5': (91.884,119.753,-9.427)
O4': (91.170,120.568,-7.252)
C8: (93.187,119.706,-5.264)
O2': (93.373,123.369,-6.977)
C6: (93.199,120.693,-1.889)
C5: (93.107,120.431,-3.267)
C4: (92.407,121.343,-4.032)
P: (94.090,118.297,-9.370)
C4': (91.271,120.907,-8.669)
C2': (92.905,122.124,-7.453)
C2: (91.952,122.596,-2.283)
N1: (92.597,121.805,-1.421)
N3: (91.798,122.459,-3.597)
N6: (93.847,119.906,-1.026)
N7: (93.594,119.398,-4.058)
N9: (92.467,120.873,-5.322)
O5': (93.290,119.650,-9.115)
O3': (91.190,123.307,-8.642)
C4: (90.472,118.628,-1.833)
N3: (89.757,119.616,-2.480)
OP1: (89.978,119.222,5.272)
OP2: (89.399,117.307,3.658)
C2: (89.163,120.713,-1.914)
C1': (88.676,121.948,0.153)
C3': (86.912,121.258,1.561)
O5': (88.630,119.646,3.193)
O4': (89.143,121.968,1.496)
C5': (88.427,121.017,3.598)
P: (89.748,118.735,3.881)
C4': (88.021,121.854,2.409)
C2': (87.146,121.901,0.201)
O2': (86.617,123.210,0.113)
N1: (89.303,120.805,-0.536)
O4: (90.945,117.688,-2.487)
O2: (88.558,121.540,-2.585)
C6: (90.012,119.858,0.163)
C5: (90.589,118.809,-0.420)
O3': (85.628,121.551,2.087)
N3: (89.757,119.616,-2.480)
OP1: (89.978,119.222,5.272)
OP2: (89.399,117.307,3.658)
C2: (89.163,120.713,-1.914)
C1': (88.676,121.948,0.153)
C3': (86.912,121.258,1.561)
O5': (88.630,119.646,3.193)
O4': (89.143,121.968,1.496)
C5': (88.427,121.017,3.598)
P: (89.748,118.735,3.881)
C4': (88.021,121.854,2.409)
C2': (87.146,121.901,0.201)
O2': (86.617,123.210,0.113)
N1: (89.303,120.805,-0.536)
O4: (90.945,117.688,-2.487)
O2: (88.558,121.540,-2.585)
C6: (90.012,119.858,0.163)
C5: (90.589,118.809,-0.420)
O3': (85.628,121.551,2.087)
Image (generated by PyMOL):