ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCJ:0235:0253

Extra

PDB:
ATOM 1 O3' G A 234 93.706 117.754 -7.860 1.00 86.22 O
ATOM 2 P A A 235 94.259 118.758 -8.989 1.00 87.43 P
ATOM 3 OP1 A A 235 93.757 118.262 -10.296 1.00 88.37 O
ATOM 4 OP2 A A 235 95.716 118.940 -8.781 1.00 88.13 O
ATOM 5 O5' A A 235 93.523 120.136 -8.699 1.00 85.46 O
ATOM 6 C5' A A 235 92.160 120.329 -9.096 1.00 85.29 C
ATOM 7 C4' A A 235 91.567 121.494 -8.347 1.00 85.67 C
ATOM 8 O4' A A 235 91.539 121.183 -6.925 1.00 85.35 O
ATOM 9 C3' A A 235 92.348 122.795 -8.477 1.00 84.99 C
ATOM 10 O3' A A 235 91.437 123.878 -8.393 1.00 83.57 O
ATOM 11 C2' A A 235 93.246 122.762 -7.246 1.00 85.66 C
ATOM 12 O2' A A 235 93.701 124.032 -6.814 1.00 85.17 O
ATOM 13 C1' A A 235 92.310 122.133 -6.218 1.00 85.24 C
ATOM 14 N9 A A 235 93.025 121.441 -5.152 1.00 84.58 N
ATOM 15 C8 A A 235 93.986 120.471 -5.264 1.00 84.26 C
ATOM 16 N7 A A 235 94.455 120.059 -4.114 1.00 84.00 N
ATOM 17 C5 A A 235 93.752 120.806 -3.183 1.00 83.96 C
ATOM 18 C6 A A 235 93.790 120.849 -1.786 1.00 84.42 C
ATOM 19 N6 A A 235 94.603 120.097 -1.043 1.00 85.46 N
ATOM 20 N1 A A 235 92.957 121.705 -1.164 1.00 85.12 N
ATOM 21 C2 A A 235 92.147 122.464 -1.905 1.00 84.82 C
ATOM 22 N3 A A 235 92.022 122.517 -3.222 1.00 84.30 N
ATOM 23 C4 A A 235 92.863 121.654 -3.809 1.00 84.04 C
ATOM 24 P A A 236 90.839 124.506 -9.735 1.00 82.07 P
ATOM 25 OP1 A A 236 91.923 124.404 -10.744 1.00 81.82 O
ATOM 26 OP2 A A 236 90.240 125.832 -9.420 1.00 82.58 O
ATOM 27 O5' A A 236 89.669 123.505 -10.139 1.00 80.58 O
TER

ATOM 1 O3' G B 252 91.350 119.023 3.240 1.00 69.50 O
ATOM 2 P U B 253 90.131 119.102 4.287 1.00 70.73 P
ATOM 3 OP1 U B 253 90.605 119.885 5.451 1.00 69.31 O
ATOM 4 OP2 U B 253 89.606 117.733 4.499 1.00 71.01 O
ATOM 5 O5' U B 253 89.019 119.951 3.526 1.00 70.48 O
ATOM 6 C5' U B 253 88.668 121.269 3.978 1.00 71.77 C
ATOM 7 C4' U B 253 88.332 122.145 2.802 1.00 71.86 C
ATOM 8 O4' U B 253 89.497 122.292 1.959 1.00 72.26 O
ATOM 9 C3' U B 253 87.289 121.555 1.887 1.00 71.36 C
ATOM 10 O3' U B 253 86.012 121.853 2.386 1.00 72.56 O
ATOM 11 C2' U B 253 87.582 122.229 0.559 1.00 71.09 C
ATOM 12 O2' U B 253 87.068 123.544 0.489 1.00 71.08 O
ATOM 13 C1' U B 253 89.108 122.283 0.600 1.00 71.27 C
ATOM 14 N1 U B 253 89.762 121.136 -0.036 1.00 70.97 N
ATOM 15 C2 U B 253 89.509 120.913 -1.369 1.00 70.30 C
ATOM 16 O2 U B 253 88.733 121.590 -2.018 1.00 68.31 O
ATOM 17 N3 U B 253 90.196 119.863 -1.913 1.00 71.05 N
ATOM 18 C4 U B 253 91.083 119.026 -1.268 1.00 72.01 C
ATOM 19 O4 U B 253 91.675 118.160 -1.916 1.00 73.39 O
ATOM 20 C5 U B 253 91.266 119.304 0.123 1.00 70.77 C
ATOM 21 C6 U B 253 90.615 120.323 0.677 1.00 70.05 C
ATOM 22 P G B 254 84.959 120.677 2.550 1.00 72.62 P
ATOM 23 OP1 G B 254 83.745 121.255 3.176 1.00 71.72 O
ATOM 24 OP2 G B 254 85.673 119.557 3.204 1.00 73.02 O
ATOM 25 O5' G B 254 84.658 120.240 1.048 1.00 74.75 O
TER

Atoms:
OP1: (93.757,118.262,-10.296)
OP2: (95.716,118.940,-8.781)
C3': (92.348,122.795,-8.477)
C1': (92.310,122.133,-6.218)
C5': (92.160,120.329,-9.096)
O4': (91.539,121.183,-6.925)
C8: (93.986,120.471,-5.264)
O2': (93.701,124.032,-6.814)
C6: (93.790,120.849,-1.786)
C5: (93.752,120.806,-3.183)
C4: (92.863,121.654,-3.809)
P: (94.259,118.758,-8.989)
C4': (91.567,121.494,-8.347)
C2': (93.246,122.762,-7.246)
C2: (92.147,122.464,-1.905)
N1: (92.957,121.705,-1.164)
N3: (92.022,122.517,-3.222)
N6: (94.603,120.097,-1.043)
N7: (94.455,120.059,-4.114)
N9: (93.025,121.441,-5.152)
O5': (93.523,120.136,-8.699)
O3': (91.437,123.878,-8.393)
C4: (91.083,119.026,-1.268)
N3: (90.196,119.863,-1.913)
OP1: (90.605,119.885,5.451)
OP2: (89.606,117.733,4.499)
C2: (89.509,120.913,-1.369)
C1': (89.108,122.283,0.600)
C3': (87.289,121.555,1.887)
O5': (89.019,119.951,3.526)
O4': (89.497,122.292,1.959)
C5': (88.668,121.269,3.978)
P: (90.131,119.102,4.287)
C4': (88.332,122.145,2.802)
C2': (87.582,122.229,0.559)
O2': (87.068,123.544,0.489)
N1: (89.762,121.136,-0.036)
O4: (91.675,118.160,-1.916)
O2: (88.733,121.590,-2.018)
C6: (90.615,120.323,0.677)
C5: (91.266,119.304,0.123)
O3': (86.012,121.853,2.386)
Image (generated by PyMOL):
PyMOL image
show in jmol